| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | 1 | 1685027 | 1686554 | 1528 | 38 [32] | [35] 36 | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
TCTAAAACTAACAAACCTAGTTCAAAAGCTCTCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCAAGAAGTCGCCATAGCAATATCATAGCTTGTTAATTGTTCAAAATCAGAGTCATCTTCTAGAATAAAAATTCTAGAATTCAAAGGAAAGAAATGTTTCGATAGTATGTCTTTGATCACTTCCTCTGTTCCCCACTGGCTAGAACCACATACAGTAATATC > 1/1684776‑1685269 | tCTAAAACTAACAAACCTAGTTCAAAAGCTCTCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGc < 1:96378/251‑1 (MQ=255)tCTAAAACTAACAAACCTAGTTCAAAAGCTCTCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGc < 1:311706/251‑1 (MQ=255) aaCTAACAAACCTAGTTCAAAAGCTCTCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTaa < 1:96515/251‑1 (MQ=255) aCAAACCTAGTTCAAAAGCTCTCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAatat < 1:1008915/251‑1 (MQ=255) aaaCCTAGTTCAAAAGCTCTCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATgg < 1:277020/251‑1 (MQ=255) gTTCAAAAGCTCTCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTaa > 1:1045544/1‑251 (MQ=255) ttCAAAAGCTCTCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAAt < 1:1027046/251‑1 (MQ=255) ctctCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGcac < 1:47150/250‑1 (MQ=255) tctcCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACaa > 1:436840/1‑251 (MQ=255) tCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCttt < 1:997867/250‑1 (MQ=255) cGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCt < 1:18866/251‑1 (MQ=255) ggtCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGc > 1:573589/1‑206 (MQ=255) gtCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGc < 1:488986/205‑1 (MQ=255) tCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAg < 1:872485/250‑1 (MQ=255) tCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAg < 1:524843/250‑1 (MQ=255) cTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAg > 1:683234/1‑249 (MQ=255) gCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAatat < 1:400523/210‑1 (MQ=255) tttttACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCttt > 1:328285/1‑221 (MQ=255) tttttACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACata > 1:864577/1‑251 (MQ=255) gCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGtt > 1:732641/1‑251 (MQ=255) gCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATAGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAat < 1:1003068/230‑1 (MQ=255) cTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTc < 1:118644/204‑1 (MQ=255) tATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGt < 1:382918/192‑1 (MQ=255) tATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCAAGAAGt > 1:327320/1‑250 (MQ=255) gTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGc > 1:434589/1‑150 (MQ=255) gTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTc < 1:675571/165‑1 (MQ=255) gTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGcac < 1:181562/177‑1 (MQ=255) ctATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGt < 1:434037/218‑1 (MQ=255) gCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCaagaag > 1:425103/1‑207 (MQ=255) gCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAatat > 1:447477/1‑119 (MQ=255) tctcAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGc > 1:342844/1‑85 (MQ=255) aaaaTCCAAATTTATATGTTTCTTCATTCATAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTTTTTACATAATATGCTGTTTGCCAAGAAGTCGCCATAGCAATATCATAGCTTGTTAATTGTTCAAAATCAGAGTCATCTTCTAGAATAAAAATTCTAGAATTCAAAGGAAAGAAATGTTTCGATAGTATGTCTTTGATc < 1:935286/251‑1 (MQ=255) aaaaTCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCAAGAAGTCGCCATAGCAATATCATAGCTTGTTAATTGTTCAAAATCAGAGTCATCTTCTAGAATAAAAATTCTAGAATTCAAAGGAAAGAAATGTTTCGATAGTATGTCTTTGATc < 1:718742/251‑1 (MQ=255) tttCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCAAGAAGTCGCCATAGCAATATCATAGCTTGTTAATTGTTCAAAATCAGAGTCATCTTCTAGAATAAAAATTCTAGAATTCAAAGGAAAGAAATGTTTCGATAGTATGTCTTTGATCACTTCCTCTGTTCCCCAc < 1:1041403/251‑1 (MQ=255) aaaaGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCAAGAAGTCGCCATAGCAATATCATAGCTTGTTAATTGTTCAAAATCAGAGTCATCTTCTAGAATAAAAATTCTAGAATTCAAAGGAAAGAAATGTTTCGATAGTATGTCTTTGATCACTTCCTCTGTTCCCCACTGGCTAGAAc < 1:837954/251‑1 (MQ=255) gAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCAAGAAGTCGCCATAGCAATATCATAGCTTGTTAATTGTTCAAAATCAGAGTCATCTTCTAGAATAAAAATTCTAGAATTCAAAGGAAAGAAATGTTTCGATAGTATGTCTTTGATCACTTCCTCTGTTCCCCACTGGCTAGAACcaca > 1:897813/1‑251 (MQ=255) tCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCAAGAAGTCGCCATAGCAATATCATAGCTTGTTAATTGTTCAAAATCAGAGTCATCTTCTAGAATAAAAATTCTAGAATTCAAAGGAAAGAAATGTTTCGATAGTATGTCTTTGATCACTTCCTCTGTTCCCCACTGGCt < 1:611987/231‑1 (MQ=255) ccTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCAAGAAGTCGCCATAGCAATATCATAGCTTGTTAATTGTTCAAAATCAGAGTCATCTTCTAGAATAAAAATTCTAGAATTCAAAGGAAAGAAATGTTTCGATAGTATGTCTTTGATCACTTCCTCTGTTCCCCACTGGCTAGAACCACATACAGTAATATc < 1:628628/251‑1 (MQ=255) | TCTAAAACTAACAAACCTAGTTCAAAAGCTCTCCTTTCTGTCGGTGGTCTAGCATAGAAGAAAATATGTTTTTTACTCGGCTCATTTCTTTTATGTATTCCGTATAATTCTCTATCGTAAGAAAAAGAAAATGGCTTACAAGGCATCGAATACTTTTTTTCAAGTTTCTCAGATAACCAGTTTCCAGCGGTAATTCCAAAAAATCCAAATTTATATGTTTCTTCAGCAAAAGAATAAACACTTCCTAAGGCAGTAAAATATGGTTCGTAATCTTGCACAAAGTATGCTTTCTTATAGCAATTATTAAATTTATTTACATAATATGCTGTTTGCCAAGAAGTCGCCATAGCAATATCATAGCTTGTTAATTGTTCAAAATCAGAGTCATCTTCTAGAATAAAAATTCTAGAATTCAAAGGAAAGAAATGTTTCGATAGTATGTCTTTGATCACTTCCTCTGTTCCCCACTGGCTAGAACCACATACAGTAATATC > 1/1684776‑1685269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |