| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 389373 = | 99 (0.880) | 7 (0.070) | 6/420 | 7.5 | 6.3% | intergenic (+25956/‑182646) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| ? | 1 | 389467 = | 115 (1.080) | intergenic (+26050/‑182552) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/389634‑389373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttccaccggcggTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG > 1/389467‑389716 GAATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAAAGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGGGGAGGAGACGTACGACCATTGT > 1:855130/1‑251GAATGTATGCATATTCATTTTACCAAGCAGAATTGCCGGGGAGCGGTGGAGGGGCAGTCGGGGTAATTAATGGCGCCAAAAGGTGCGTTTACACTCACCCTACCCAACTCATTAGAATTTACGGCCCCTA‑CCCACGCAACTTACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGGCGTTGTGTAGGTAAATTTCGCGGGACATGGTGGGGGAGACGTACGACCATTGT > 1:640593/1‑251 ATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTC‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTC < 1:1043155/251‑1 GTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAAAGGCGCCAAATGGTGCGTTTACACTCACCCTACCCCTCTTATTAGAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATTGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCA > 1:888591/1‑251 TGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGGATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACC > 1:610221/1‑250 AATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTCCCCATCTCATTAGAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGC < 1:78421/251‑1 GTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGGAGG > 1:913970/1‑251 cCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTACCCCACGCACCTCACGCTTGGCCGGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGA < 1:205830/250‑1 ctTTTACACTCACCCTCCCCATCTCATAAGAATTTGCGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGAGGTATTAAAGGCGTTACAGGC < 1:1008298/194‑1 cCACCCTACCCATCTCATTAGATTTTACTTCCCCTA‑CCCACGCAACTCTCGCTTTGCGTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACG < 1:397091/250‑1 ACCCTACCCATCTCATTAGAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTC > 1:961846/1‑157 CCCTACCCATCTCATTAGAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTC > 1:167875/1‑156 GAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAG < 1:40581/156‑1 A‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTC > 1:620318/1‑124 CCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATAC < 1:481690/197‑1 GTTCCACCGTCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCATGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCCCCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACTCTCCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTC < 1:1086534/250‑1 CACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCG > 1:994296/1‑250 CGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCACCACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTGCCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACT < 1:639168/251‑1 GGCGGTATAAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTGCCCCGAATCCCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATG < 1:1063244/190‑1 GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG > 1:385333/1‑251 GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG > 1:340902/1‑251 GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG > 1:122356/1‑251 GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG > 1:1085435/1‑251 GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTC < 1:1081317/175‑1 GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACAT > 1:104744/1‑167 GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATG < 1:825472/160‑1 GAATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTA‑CCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/389634‑389373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttccaccggcggTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG > 1/389467‑389716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |