New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	235391 =	151 (1.330)	5 (0.050)	5/426	8.0	3.3%	intergenic (‑21507/+44292)	unknown/unknown	tRNA‑Ser‑GCT/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA
	?	1	235618 =	150 (1.390)					intergenic (‑21734/+44065)	unknown/unknown	tRNA‑Ser‑GCT/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TATGCTTGAATTGCCCCATTTGCACCTGCGTACTGGCGCGGGTGAGCTGCTCCAGCGGGCGCACCACAGCTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCCCGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/235649‑235391 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgccagTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGGCGCGCACTTTCACTAAAATGTCATCGGAGTTGGGTAAACTGTATTCCGGTTTGGAAGCCACAGTGAATGAAAAAACGCAAAAGCTACAACAAACCAACCGCTCTTTAACGACCTTATATCACTGCTCCCAACTTGTGACGACCAATAAAATCGACGGCAAAATTTTGCAACTGGTG  >  1/235618‑235867                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATGCTTGAATTGCCCCATTTGCACCTGCGTACTGGCGCGGGTGAGCTGCTCCAGCGGGCGCACCACAGCTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCC                                                                                                                                                                                                                                                                    <  1:359465/251‑1  ATGCTTGAATTGCCCCATTTGCACCTGCGTACTGGCGCGGGTGAGCTGCTCCAGCGGGCGCACCACAGCTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCC                                                                                                                                                                                                                                                                    >  1:286731/1‑250   TGCTTGAATTGCCCCATTTGCACCTGCGTACTGGCGCGGGTGAGCTGCTCCAGCGGGCGCACCACAGCTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCCCG                                                                                                                                                                                                                                                                  >  1:445454/1‑251   TGCTTGAATTGCCCCATTTGCACCTGCGTACTGGCGCGGGTGAGCTGCTCCAGCGGGCGCACCACAGCTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCCCG                                                                                                                                                                                                                                                                  >  1:72814/1‑251                                  TGGCGCGGGTGAGCTGCTCCAGCGGGCGCACCACAGCTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCCCGCGCCAGTACGCAGGTGCAAATGGGGCAATTC                                                                                                                                                                                                                                   <  1:865675/251‑1                                            GAGCTGCTCCAGCGGGCGCACCACAGCTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCCCGCGCCAGTACGCAGGTGCAAATGGGGCAA                                                                                                                                                                                                                                      >  1:1010774/1‑238                                                               ACCACAGCTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCCCGCGCCAGTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGA                                                                                                                                                                                                      <  1:993385/251‑1                                                                      CTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTC                                                                                                                                                                                                                                                                     <  1:355874/181‑1                                                                                                               ATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTC                                                                                                                                                                                                                                                                     >  1:38902/1‑140                                                                                                                                                                                 AGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCCCGCGCCAGTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGGCGCGCACTTTCACTAAAATGTCATCGGAGTTGGG                                                                                                                                                >  1:583972/1‑191                                                                                                                                                                                                                                                      TGTTCCCGCGCCAGTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGGCGCGCACTTTCACTAAAATGTCATCGGAGTTGGGTAAACTGTATTCCGGTTTGGAAGCCACAGTGAATGAAAAAACGCAAAAGCTACAACAAACCAACCGCTCTTTAACGACCTTATATCACTGCTCCCAACTTGTGACGACCAATAAAATCGACGGCAAAAT               <  1:74520/251‑1                                                                                                                                                                                                                                                              CGCCAGTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGGCGCGCACTTTCACTAAAATGTCATCGGAGTTGGGTAAACTGTATTCCGGTTTGGAAGCCACAGTGAATGAAAAAACGCAAAAGCTACAACAAACCAACCGCTCTTTAACGACCTTATATCACTGCTCCCAACTTGTGACGACCAATAAAATCGACGGCAAAATTTTGCAA        >  1:542727/1‑250                                                                                                                                                                                                                                                              CGCCAGTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGGCGCGCACTTTCACTAAAATGTCATCGGAGTTGGGTAAACTGTATTCCGGTTTGGAAGCCACAGTGAATGAAAAAACGCAAAAGCTACAACAAACCAACCGCTCTTTAACGACCTTATATCACTGCTCCCAACTTGTGACGACCAATAAAATCGACGGCAAAATTTTGCAA        >  1:84882/1‑250                                                                                                                                                                                                                                                              CGCCAGTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGGCGCGCACTTTCACTAAAATGTCATCGGAGTTGGGTAAACTGTATTCCGGTTTGGAAGCCACAGTGAATGAAAAAACGCAAAAGCTACAACAAACCAACCGCTCTTTAACGACCTTATATCACTGCTCCCAACTTGTGACGACCAATAAAATCGACGGCAAAATTTTGCAA        >  1:21540/1‑250                                                                                                                                                                                                                                                                CCAGTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGG                                                                                                                                                                                  >  1:827597/1‑78                                                                                                                                                                                                                                                                   GTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGGCGCGCACTTTCACTAAAATGTCATCGGAGTTGGGTAAACTGTATTCCGGTTTGGAAGCCACAGTGAATGAAAAAACGCAAAAGCTACAACAAACCAACCGCTCTTTAACGACCTTATATCACTGCTCCCAACTTGTGACGACCAATAAAATCGACGGCAAAATTTTGCAACTGGTG  >  1:49662/1‑251                                                                                                                                                                                                                                                                   GTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGGCGCGCACTTTCACTAAAATGTCATCGGAGTTGGGTAAACTGTATTCCGGTTTGGAAGCCACAGTGAATGAAAAAACGCAAAAGCTACAACAAACCAACCGCTCTTTAACGACCTTATAT                                                           >  1:784868/1‑194                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATGCTTGAATTGCCCCATTTGCACCTGCGTACTGGCGCGGGTGAGCTGCTCCAGCGGGCGCACCACAGCTTTTCGGGTGTACCAATTCACGTAAGACACCATGATCACAATAAGCAGCATGGAAAAAATAATCACGCACAGCGCCCAAATCCATTTTTCTTCCGCCGAATGTTGCAGGGTAAAAACAAATTGATCCACTTGTTCCACATAATTGGCGATATTCTTTTGATATTCGGTGAAATTTTGTTCCCGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/235649‑235391 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgccagTACGCAGGTGCAAATGGGGCAATTCAAGCATATTCCGCTGGACGTGCGTAAAGAAGACGAACTGGGGCATTTGGCGCGCACTTTCACTAAAATGTCATCGGAGTTGGGTAAACTGTATTCCGGTTTGGAAGCCACAGTGAATGAAAAAACGCAAAAGCTACAACAAACCAACCGCTCTTTAACGACCTTATATCACTGCTCCCAACTTGTGACGACCAATAAAATCGACGGCAAAATTTTGCAACTGGTG  >  1/235618‑235867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.