Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,836,3050AC37.5% 157.2 / 12.9 73intergenic (+26240/‑113148)unknown/unknowntRNA‑Leu‑CAA/tRNA‑Asp‑GTC
Reads supporting (aligned to +/- strand):  ref base A (32/13);  new base C (0/27);  total (32/41)
Fisher's exact test for biased strand distribution p-value = 3.13e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CAGACTAATTGCCACCACGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAACGGCAATAATAAATAATACAAAAAACGATAATGGCATACGGAAGACATCATATCCTGCCACTCTTGAGGTT  >  1/1836067‑1836555
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                            
cagACTAATTGCCACCACGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTacgcc                                                                                                                                                                                                                                                     <  1:324719/248‑4 (MQ=255)
cagACTAATTGCCACCACGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACAcc                                                                                                                                                                                                                                                     <  1:673472/248‑1 (MQ=255)
cagACTAATTGCCACCACGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACAcc                                                                                                                                                                                                                                                     <  1:1109887/248‑1 (MQ=255)
  gACTAATTGCCACCACGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACg                                                                                                                                                                                                                                                 >  1:105244/1‑250 (MQ=255)
    cTAATTGCCACCACGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑a                                                                                                                                                                                                                                             >  1:1192888/1‑251 (MQ=255)
      aaTTGCCACCACGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTacac                                                                                                                                                                                                                                                      <  1:903494/241‑1 (MQ=255)
      aaTTGCCACCACGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑Att                                                                                                                                                                                                                                           <  1:718991/251‑1 (MQ=255)
           ccaccaCGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑aa                                                                                                                                                                                                                                      <  1:493790/250‑1 (MQ=255)
           ccaccaCGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AAc                                                                                                                                                                                                                                     <  1:829961/251‑1 (MQ=255)
              ccacGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCg                                                                                                                                                                                                                                   >  1:412339/1‑250 (MQ=255)
                        ggAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTacac                                                                                                                                                                                                                                                      <  1:717050/223‑1 (MQ=255)
                            gggttGATTCTTTATCTTCCGGAAGAAAAAAAAAAGGAAAAAAAAAAAAAACGAGAAAAAAAATTCCCGCACTTC‑CCGATGCACCTCACACAGCATAAATAAAA‑CCGGATTTATGCAGGGGTTTAACGCTTTATATTAAGATTAAAAAAATGCCGGAAAATAAAT‑TTTATCAGGCTTTTTTTTAAAAACGTACCCCGGTGCCAACCCCGACCCCTACCCCAACGCC‑ATTGG‑AACCGCCACTTGCACCGac                                                                                                                                                                                                                     <  1:715735/246‑1 (MQ=255)
                            gggCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCaa                                                                                                                                                                                                                                                   <  1:180416/222‑1 (MQ=255)
                            gggCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGaca                                                                                                                                                                                                                    >  1:124571/1‑251 (MQ=255)
                            gggCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGaca                                                                                                                                                                                                                    >  1:697683/1‑251 (MQ=255)
                            gggCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGaca                                                                                                                                                                                                                    >  1:513805/1‑251 (MQ=255)
                                   ttCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACgg                                                                                                                                                                                                             >  1:163007/1‑251 (MQ=255)
                                   ttCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACgg                                                                                                                                                                                                             >  1:680584/1‑251 (MQ=255)
                                   ttCGTTATCTTCCGGAAGAAAAAAAAAAGGAAAAAAAAAAAAAACGAGAAAAAAAATTCCCGCACTTC‑CCGATGCAACACACACAGAATAAATAAAA‑CCGGATTTATGCAGGGGTTTACCGCTTTATATTAAGATAAAAAAAATGCCTAAAAATAAAA‑TTTATCAGGCTTTTTTTTAAAACCGTACCCCGGTGCAAACACCGACCCCTCCACAACCCCC‑ATGGG‑AACCGCCACTTGCACCGACACCTACgg                                                                                                                                                                                                             <  1:1096134/251‑1 (MQ=255)
                                       ttATCTTCCGGAAGAAAAAAAAAAGAAAGAAAAAAAAAAACGAGGAAAAAAATTCCCGCCTTTT‑CCGATGCAACTCACACAGAATGAATTAAA‑CCGGATTTATGCAGCGGTTTAACGCTTTATATAAGGATTAAAAAAATGCCTTAAAATAAAA‑TTTTTCAGGCATTTTTTTATAAACTTACACCGGTGCCAAACCCGACCCCTACCCCAACGCC‑ATTGG‑ACCCGCCACTTGCACCGACACCTACGGAac                                                                                                                                                                                                          <  1:1158539/250‑1 (MQ=255)
                                                         aaaaaaggaagaacaataaaaACGAGAAAAAAAATTCCCGCACTTT‑CCGATGCAACCCACACAGCAGGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATAAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCTTTTTTTTAAAAACGTCCCCCGGTGCCAACCCCGACCCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAg                                                                                                                                                                                       <  1:12426/249‑1 (MQ=255)
                                                         aaaaaaggaaaaaaaaaaaaaACGAGAAAAAAAATTCCCGCACTTT‑CCGATGCAACCCACACAGCATGAATAAAA‑CCGGATTTATGCAGCGGGTTAACGCTTTATATTAAGATTAAAAAAATGCCTGATAATGAAT‑TTTATCAGGCATTTTTTTATAAACGTACCCCGGTGCCAACCCCGATCCCTACACCACCGCC‑ATGGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTACCAGGCTAAATAg                                                                                                                                                                                       <  1:490986/249‑1 (MQ=255)
                                                          aaaaaggaaaaacaaaaaaaACGAGAAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATAAAA‑CCGGATTTATGCAGGGGGTTAACGCTTTATATAAAGATTAAAAAAATGCCCG‑‑AATAAAT‑TTTATCAGGCATTTTTTTAAAACCGTACCCCGGTGCAAACCCCGACCCCTACCCCACCCCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGaat                                                                                                                                                                                    <  1:390305/250‑1 (MQ=255)
                                                            aaaggaaaaacaaaaaaaACGAGAAAAAAAATTACCGCCCTTT‑CCGATGCAACTCACCCAGAATAAATTAAC‑CCGGATTTATGCAGCGGGTTAACGCTTTATATTAAGATTAAAAAAATGCCTAATAA‑GAAATTTTATCAGGCTTTTTTTTAAAAACGTACCCCGGTGCCAACACCGACCCCTACCCCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGaat                                                                                                                                                                                    <  1:101552/251‑1 (MQ=255)
                                                                aaaaaaaaaaaaaaaCGAGAAAAAAAATTCCCGCACTTC‑CCGATGAAACTCCCACAGCATAAATTAAA‑CCGGATTTATGCAGGGGTTTAACGCTTTATATTAAGATAAAAAAAATCCCTGAAAAAAAAA‑TTTATCAGGCTTTTTTTTAAAACCGTCCCCGGGTGCCAACCCCGACCCCTACCCCACCGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGaataaat                                                                                                                                                                                <  1:542203/241‑1 (MQ=255)
                                                                  aaaacaaaaaaaACGAGAAAAAAAATTCCCGC‑CTTTCCCGATGAAACTCACACAGCATAAATAAAA‑CCGGTTTTATGCGGCGGTTTAACGCTTTATATAAAAATTAAAAAAATGCCTGAAAATAAAA‑TTTATCAGTCATTTTTTAAAAACCGTCCACCGGTCCAAACCCCG‑ACCCCACCCCCACCCCAATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATAc                                                                                                                                                                              <  1:614692/249‑1 (MQ=255)
                                                                    aaaaaaaaaaaCGAGAAAAAAAATTCCCGCCCTTT‑CCGATGCAACTCACACAGCATAAATTAAC‑CCGGATTTATGCAGGGGTTTAACGCTTTATATTAAGATTAAAAAAATGCCTGATAATGAAA‑TTTATCAGGCTTTTTTTTATAACCGTCCCCCGGTGCCAACCCCGACCCCTCCACCACCGCC‑‑TTGGAAACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATAc                                                                                                                                                                              <  1:442303/243‑1 (MQ=255)
                                                                      aaaaaaaaaCGAGAAAAAAAATTCCCGCCCTTC‑CCGATGCAACTCCCACAGCATAAATTAAC‑CCGGATTTATGCGGCGGTTTAACGCTTTATATAAAGATTAAAAAAATGCCTGATAATAAAA‑TTTATCAGGCTTTTTTTTATAAACGTCCCCCGGTGCCAACACCGACCCCTACCCCACCGCC‑ATGGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGcc                                                                                                                                                                          <  1:1067676/247‑1 (MQ=255)
                                                                       aaaaaaaaCGAGAAAAAAAATTCCCGCCCTTT‑CCGATGCAACTCACACAG‑AAGAAATAAACCCGGTTTTAGGCAGGGGTTTACCGCTTTATATAAAGATAAAAAAAATCCCTGATAATAAAT‑TTTATCAGGCTTTTTTTTAAAAACGTACCCGGGTGCAACCCCCGACCCCACCACCACCGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCa                                                                                                                                                                         <  1:493034/248‑1 (MQ=255)
                                                                                     aaaaaaTTACCGCACTTC‑CCGATGCAACCCACACAGCATGAATTAAC‑CCGGATTTATGCAGGGGGTTACCGCTTTATATTAAGATTAAAAAAATGCCTGATAATAAAA‑TTTATCAGGCATTTTTTTAAAAACGTACCCCGGTGCCAACCCCGACCCCTACCCCACCGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTc                                                                                                                                                           <  1:369196/251‑1 (MQ=255)
                                                                                                  ctcttcccGATGCATCACACACAGCAAGAATTAAA‑CCGTTTTTATGCGGGGGTTTAACGCTTTATATTAAGATTAAAAAAATGCCTGATAAAAAAA‑TTTATCAGGCATTTTTTTATAAACTTACCCCGGTGCCAACCCCGACCCCTCCCCCAGCACC‑GTGGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCGGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCctc                                                                                                                                               <  1:246921/245‑1 (MQ=255)
                                                                                                   cTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCtt                                                                                                                                             >  1:842127/1‑251 (MQ=255)
                                                                                                     tt‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCtttt                                                                                                                                           >  1:317013/1‑251 (MQ=255)
                                                                                                     tt‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCtttt                                                                                                                                           >  1:75519/1‑251 (MQ=255)
                                                                                                               aaCTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACttttt                                                                                                                                   >  1:437217/1‑250 (MQ=255)
                                                                                                                aCTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAAc                                                                                                                                                                                                                                                             >  1:326867/1‑129 (MQ=255)
                                                                                                                       caacataaaTTAAC‑CCGGATTTATGCAGGGGTTTAACGCTTTATATTAAGATTAAAAAAATCCCTGATAATAAAA‑TTTATCAGGTATTTTTTTAAAACCGTACACCGGTCCCAACCCCGACCCCTACCCCACCGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCTCATTTc                                                                                                                          <  1:854673/244‑1 (MQ=255)
                                                                                                                         gCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTacac                                                                                                                                                                                                                                                      <  1:1083978/127‑1 (MQ=255)
                                                                                                                         gCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCAc                                                                                                                                                                                                                         >  1:134184/1‑154 (MQ=255)
                                                                                                                          aaTGAATTAAA‑CCGGATTTATGCAGGGGGTTAACGCTTTATATTAAGATTAAAAAAATCCCTGATAATAAAA‑TTTATCAGGCTTTTTTTTAAAAACGTCCACCGGTGCCACCCCCGACCCCTACCCCACCGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTc                                                                                                                          <  1:977142/247‑1 (MQ=255)
                                                                                                                            taaaTTAAA‑CCGGATTTATGCGGCGGGTTAACGCCTTATATTAAGATTAAAAAAATGCCTGATAATGAAT‑TTTATCAGGCTTTTTTTTATAACCGTACCCCGGTGCCAACCCCGACCCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCtaaat                                                                                                                     <  1:865313/249‑1 (MQ=255)
                                                                                                                             gAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGaa                                                                                                                                                                                                           >  1:19500/1‑164 (MQ=255)
                                                                                                                                      aaggttttAGGCAGCGGGTTAACGCTTTATATTAAGATAAAAAAAATGCTTAATAATAAAA‑TTTTTCAGGCATTTTTTTAAAAACGTACCCCGGTGCCAACCCCGACCCCTCCCCCACCGCA‑ATGGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATac                                                                                                            <  1:1173743/246‑1 (MQ=255)
                                                                                                                                         tttttATGCAGCGGGTTACCGCCTTATATAAAGATTGAAAAAATGCCTAATAATGAAT‑TTTACCAGGCATTTTTTTAAAACCGTCCACCGGTCCCACCACCGACCCCTCCCCCACCCCA‑ATTGA‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATacac                                                                                                          <  1:1087779/248‑1 (MQ=255)
                                                                                                                                         gATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAAttt                                                                                                                                                                >  1:864929/1‑196 (MQ=255)
                                                                                                                                         gATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTcc                                                                                                                                 >  1:35616/1‑227 (MQ=255)
                                                                                                                                           tttATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCtaaat                                                                                                                     >  1:708489/1‑237 (MQ=255)
                                                                                                                                              aTGCAGCGGTTTAACGCTTTATATAAAGATTAAAAAAATGCCTGATAATGAAA‑TTTATCAGGCTTTTTTTTATAAACGTACCCCGGTCCCACCCCCAAACCCTCCACCACCCCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTc                                                                                                                                                           <  1:1100845/196‑1 (MQ=255)
                                                                                                                                                 cagggggTTAACGCCTTATATAAAGATTAAAAAAATGCCTAATAATGAAA‑TTTACCAGGCTTTTTTTTAAAAACGTACCCCGGTGCCACCCCCGACCCCCACCCCACCCCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTa                                                                                                  <  1:1182520/246‑1 (MQ=255)
                                                                                                                                                     ggtttAACGCCTTATATAAAGATAAAAAAAATGCCTGATAATGAAT‑TTTATCAGGCTTTTTTTTATAAACGTACCCCGGTGCCAACACCGACCCCTCCACCAACGCC‑ATGGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATc                                                                                              <  1:878261/247‑1 (MQ=255)
                                                                                                                                                             gctttATATTAAGATAAAAAAAATGCCTAATAATAAAA‑TTTATCGGGCTTTTTTTTAAAACCGTCCCCCGGTGCCAACCCCGACCCCTACCCCAACGCC‑ATGGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCT‑AATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTCTTcc                                                                                                                                 <  1:233906/203‑1 (MQ=255)
                                                                                                                                                             gCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAg                                                                                      >  1:1147172/1‑250 (MQ=255)
                                                                                                                                                             gCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAg                                                                                      >  1:148297/1‑250 (MQ=255)
                                                                                                                                                              ccTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCa                                                                                    >  1:642338/1‑251 (MQ=255)
                                                                                                                                                                  atatTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATAc                                                                                                                                                                              >  1:357212/1‑157 (MQ=255)
                                                                                                                                                                  atatTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAatat                                                                                >  1:367194/1‑251 (MQ=255)
                                                                                                                                                                  atatTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAatat                                                                                >  1:1055400/1‑251 (MQ=255)
                                                                                                                                                                  atatTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCACCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAAt                                                                                                                                                                  >  1:215025/1‑169 (MQ=255)
                                                                                                                                                                   tataaagataaaaaaaaTGCCTAATAATAAAA‑TTTATCAGGCTTTTTTTAAAAAACGTCCCCCGGTGCAAACCCCGACCCCAACCCCACCGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATac                                                                                                            <  1:233271/211‑1 (MQ=255)
                                                                                                                                                                   tataaaGATTAAAAAAATGCCTAATAATAAAA‑TTTATCAGGCTTTTTTTTATAAACGTACCCCGGTCCAAACACCAACCCCTCCCCCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAAC‑CGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAatatat                                                                              <  1:85258/247‑1 (MQ=255)
                                                                                                                                                                    tttAAGATTAAAAAAATGCCGAAAAATAAAT‑TTTATCGGGCATTTTTTTAAAACCGTCCCCCGGTCCCAACCCCAACCCCCCCCCCAACCCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAatatat                                                                              <  1:898923/250‑1 (MQ=255)
                                                                                                                                                                                  aaTGCCTAATAATAAAA‑TTTATCAGGCTTTTTTTTATAAACGTCCCCCGGTGCCACCACCGACCCCTACACCAACGCC‑ATTGA‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAACGGCaataa                                                                <  1:591748/251‑1 (MQ=255)
                                                                                                                                                                                       ctaaaaataaaa‑TTTATCAGGCTTTTTTTTAAAACCGTACCCCGGTCCCAACCCCGACCCCTCCCCCACCGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAACGGCaataataaat                                                           <  1:213527/242‑1 (MQ=255)
                                                                                                                                                                                                aaa‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCtaaat                                                                                                                     >  1:57141/1‑184 (MQ=255)
                                                                                                                                                                                                           ggCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑aa                                                                                                                                                                                                                                      <  1:1104299/61‑1 (MQ=255)
                                                                                                                                                                                                                         aaCGTGCACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTa                                                                           >  1:280841/1‑202 (MQ=255)
                                                                                                                                                                                                                         aaCGTACCCCGGTGCAAACACCGACCCCTCCCCCACCGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAACGGCAATAATAAATAATAc                                                      <  1:342606/223‑1 (MQ=255)
                                                                                                                                                                                                                         aaCGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATAtt                                                                             >  1:267589/1‑200 (MQ=255)
                                                                                                                                                                                                                          ccgtcccccGGTGCCAACACCGACCCCTACCCCACCGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAACGGCaataataaat                                                           <  1:956914/210‑1 (MQ=255)
                                                                                                                                                                                                                          aCGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCtaaat                                                                                                                     >  1:382238/1‑159 (MQ=255)
                                                                                                                                                                                                                            gTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAACGGCAATAATAAATAATACAAAAAACGATAATGGCATACGGAAg                             >  1:536709/1‑245 (MQ=255)
                                                                                                                                                                                                                                   ggTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACGTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAAc                                                                        >  1:626440/1‑195 (MQ=255)
                                                                                                                                                                                                                                            acCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAACGGCAATAATAAATAATAc                                                      >  1:457117/1‑204 (MQ=255)
                                                                                                                                                                                                                                                 aCCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAACGGCAATAATAAATAATACAAAAAACGATAATGGCATACGGAAGACATCATATCCTGCCACTCTTGAGGtt  >  1:482530/1‑251 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                            
CAGACTAATTGCCACCACGCAGCAGGAAGGGCTGATTCGTTATCTTCCGGAAGAACAATAAAAGGAAGAACAATAAAAACGAGGAAAAAAATTACCGCACTTT‑CCGATGCAACTCACACAGCATGAATTAAA‑CCGGATTTATGCAGCGGGTTAACGCCTTATATTAAGATTGAAAAAATGCCTGATAATGAAA‑TTTATCAGGCATTTTTTTATAAACGTACACCGGTGCCAACACCGAACCCTACACCAACGCC‑ATTGG‑AACCGCCACTTGCACCGACACCTACGGAACACGCTGCCAGGCTAAATAGAATAAATACTGCCAGGATAATTTTTTTCATACTTCGCCTCTTTTCACTTTTTCCACATTTCTAAATAAACGATACACCCCGATTAAATCTTTTTTAGCAATATATTTAAACGGCAATAATAAATAATACAAAAAACGATAATGGCATACGGAAGACATCATATCCTGCCACTCTTGAGGTT  >  1/1836067‑1836555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑