New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	548931 =	117 (0.940)	5 (0.040)	5/418	8.5	3.7%	intergenic (+25957/‑182636)	unknown/unknown	tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
	?	1	549025 =	147 (1.260)					intergenic (+26051/‑182542)	unknown/unknown	tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/549191‑548931 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttccaccggcggTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG  >  1/549025‑549274                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGT                                                                                                                                                                                                                                                                       <  1:627840/250‑1  ATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATTGCCGTTGTGGAGGTAAATTTTGCGGATCATGGTGGAGGAGACGTACGACCATTGTT                                                                                                                                                                                                                                                                      >  1:777151/1‑250  ATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTC                                                                                                                                                                                                                                                                     <  1:861911/251‑1  ATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGGAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTT                                                                                                                                                                                                                                                                      >  1:771112/1‑250    GTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGGATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACAATCACCCTACCCATCTCATTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACCACCATTGTTCCA                                                                                                                                                                                                                                                                   >  1:241729/1‑251       TGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCAACCCACGCAACTCCCGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCG                                                                                                                                                                                                                                                                <  1:215370/251‑1         CATATTCGTTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGGGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGG                                                                                                                                                                                                                                                               >  1:515557/1‑250                                                   GGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCCCCCTCCCCATCTCATTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGT                                                                                                                                                                                                                     <  1:1182868/250‑1                                                             gttaataatTGGCGCCAAATGGTGCGTTCACACCCTCCTTCCCCATCTCTTTAGAATTTACGACCCCTCCCCACCCAACTCACGCTTTCCATGTAACCCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTA                                                                                                                                                                                                           <  1:135903/241‑1                                                                             AAATGGTGCGTTTACACTCACCCTACCCATCT‑TTTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGT                                                                                                                                                                                         <  1:357849/251‑1                                                                                                                                                                                   ACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCC                                                                                                                                                <  1:841555/191‑1                                                                                                                                                                                    CCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGGAAAATGAATATGCATACATT                                                                                     >  1:362694/1‑249                                                                                                                                                                                                                                                         GTTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTC               <  1:1087538/250‑1                                                                                                                                                                                                                                                          TTCCACCGGCGGTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCAC             <  1:308378/251‑1                                                                                                                                                                                                                                                                     GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG  >  1:534905/1‑251                                                                                                                                                                                                                                                                     GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG  >  1:695997/1‑251                                                                                                                                                                                                                                                                     GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG  >  1:717085/1‑251                                                                                                                                                                                                                                                                     GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG  >  1:82677/1‑251                                                                                                                                                                                                                                                                     GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACC                                                                                <  1:88937/173‑1                                                                                                                                                                                                                                                                     GTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGT                                                                                                                                                                                         <  1:764445/68‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATGTATGCATATTCATTTTACCAAGCAGAATTGGCGGGAAGTGTTGGAGGGGTATTCGGGGTAATTAATGGCGCCAAATGGTGCGTTTACACTCACCCTACCCATCTCATTAGAATTTACGTCCCCTACCCACGCAACTCACGCTTTGCCTGTAACGCCTTTAATACCGCCGGTGGAACCAGTTGACTCATATCGCCGTTGTGTAGGTAAATTTCGCGGATCATGGTGGAGGAGACGTACGACCATTGTTCCACCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/549191‑548931 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttccaccggcggTATTAAAGGCGTTACAGGCAAAGCGTGAGTTGCGTGGGTAGGGGACGTAAATTCTAATGAGATGGGTAGGGTGAGTGTAAACGCACCATTTGGCGCCATTAATTACCCCGAATACCCCTCCAACACTTCCCGCCAATTCTGCTTGGTAAAATGAATATGCATACATTCTACCTCTTTGGTGAATGAGCGATGTAGCCGTTGCAGGTTGGCTTCTTTCCAAAAATGCCCGGATTTTTCACCGCACTTATCG  >  1/549025‑549274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.