| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 288651 | 129 (1.040) | 5 (0.040) | 5/428 | 8.6 | 3.8% | intergenic (+123815/+2092) | unknown/unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | 1 | = 288660 | 126 (1.050) | intergenic (+123824/+2083) | unknown/unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTATAAAATCTGATACAAACCGACCAACAGCAAGCAATGCACAATACGCTTTTTACCGCACAATGGTTTATCAACCAATTGTGCAATAATCTGTTCCAAACGGGGCAACACACGGCATACGCCAAAGCAAATTTCCTGTAACAACGGCAGATCCTGCGCTTTGATGACCACCTGAGCATCAGGCAACAGGGATGAAAGTGATTTCCCCTGTTCCAGCACCTGAAAAAGAATTTGTACCGCTGCCGTGCGGGCGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/288395‑288651‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggaaaCCACCGCACTTTCCGCCCGCACGGCAGCGGTACAAATTCTTTTTCAGGTGCTGGAACAGGGGAAATCACTTTCATCCCTGTTGCCTGATGCTCAGGTGGTCATCAAAGCGCAGGATCTGCCGTTGTTACAGGAAATTTGCTTTGGCGTATGCCGTGTGTTGCCCCGTTTGGAACAGATTATTGCACAATTGGTTGATAAACCATTGTGCGGTAAAAAGCGTATTGTGCATTGCTTGCTGTTGGTC < 1/288660‑288416 GTATAAAATCTGATACAAACCGACCAACAGCAAGCAATGCACAATACGCTTTTTACCGCACAATGGTTTATCAACCAATTGTGCAATAATCTGTTCCAAACGGGGCAACACACGGCATACGCCAAAGCAAATTTCCTGTAACAACGGCAGATCCTGCGCTTTGATGACCACCTGAGCATCAGGCAACAGGGATGAAAGTGATTTCCCCTGTTCCAGCACCTGAAAAAGAATTTGTACCGCTGCCGTGCGGG > 1:716434/1‑251 TATAAAATCTGATACAAACCGACCAACAGCAAGCAATGCACAATACGCTTTTTACCGCACAATGGTTTATCAACCAATTGTGCAATAATCTGTTCCAAACGGGGCAACACACGGCATACGCCAAAGCAAATTTCCTGTAACAACGGCAGATCCTGCGCTTTGATGACCACCTGAGCATCAGGCAACAGGGATGAAAGTGATTTCCCCTGTTCCAGCACCTGAAAAAGAATTTGTACCGCTGCCGTGCGGG > 1:38336/1‑250 TATAAAATCTGATACAAACCGACCAACAGCAAGCAATGCACAATACGCTTTTTACCGCACAATGGTTTATCAACCAATTGTGCAATAATCTGTTCCAAACGGGGCAACACACGGCATACGCCAAAGCAAATTTCCTGTAACAACGGCAGATCCTGCGCTTTGATGACCACCTGAGCATCAGGCAACAGGGATGAAAGTGATTTCCCCTGTTCCAGCACCTGAAAAAGAATTTGTACCGCTGCCGTGCGGG > 1:649279/1‑250 ATCTGATACAAACCGACCAACAGCAAGCAATGCACAATACGCTTTTTACCGCACAATGGTTTATCAACCAATTGTGCAATAATCTGTTCCAAACGGGGCAACACACGGCATACGCC‑AAGCAAATTTCCTGTAACAACGGCAGATCCTGCGCTTTGATGACCACCTGAGCATCAGGCAACAGGGATGAAAGTGATTTCCCCTGTTCCAGCACCTGAAAAAGAATTTGTACCGCTGCCGTGCGGGCGGAAAC > 1:699782/1‑250 GGCAACAGGGATGAAAGTGATTTCCCCTGTTCCAGCACCTGAAAAAGAATTTGTACCGCTGCCGTGCGGGCGGAAACCACCGCACTTTCCGCCCGCACGGCAGCGGTACAAATTCTTTTTCAGGTGCTGGAACAGGGGAAATCACTTTCATCCCTGTTGCCTGATGCTCAGGTGGTCATCAAAGCGCAGGATCTGCCGTTGTTACAGGAAATTTGCTTTGGCGTATGCCGTGTGTTGCCCCGTTTGGAACA > 1:56409/1‑251 GGATGAAAGTGATTTCCCCTGTTCCAGCACCTGAAAACGAATTTGTACCGCTGCCGTGCGGGCGGAAACCACCGCACTTTCCGCCCGCAAGGCAGCGGTACAACTTCTTTTTCAGGTGCTGGAACAGGGGAAATCACTTTCATCCCTGTTGCCTGATGCTCAGGCGGACATCAAAGCGCAGGATCTGCCGCTGTTACAGGAAATTTGCTTTGGCGTATGCCGTGTGTTGCCCCGTTTGGAACATAATATTG > 1:201701/1‑251 CCTGAAAAAGAATTTGTACCGCTGCCGTGCGGGCGGAAACCACCGCACTTTCCGCCCGCACGGCAGCGGTACAAATTCTTTTTCAGGTGCTGGAACAGGGGAAATCACTTTCATCCCTGTTGCCTGATGCTCAGGTGGTCATCAAAGCGCAGGATCTGCCGTTGTTACAGGAAATTTGCTTTGGCGTATGCCGTGTGT < 1:1151546/198‑1 CTGCCGTGCGGGCGGAAACCACCGCACTTTCCGCCCGCACGGCAGCGGTACAAATTCTTTTTCAGGTGCTGGAACAGGGGAAATCAC > 1:605604/1‑87 GCGGAAACCACCGCACTTTCCGCCCGCACGGCAGCGGTACAAATTCTTTTTCAGGTGCTGGAACAGGGGAAATCACTTTCATCCCTGTTGCCTGATGCTCAGGTGGTCATCAAAGCGCAGGATCTGCCGTTGTTACAGGAAATTTGCTTTGGCGTATGC > 1:673576/1‑159 CGGAAACCACCGCACTTTCCGCCCGCACGGCAGCGGTACAAATTCTTTTTCAGGTGCTGGAACAGGGGAAATCACTTTCATCCCTGTTGCCTGATGCTCAGGTGGTCATCAAAGCGCAGGATCTGCCGTTGTTACAGGAAATTTGCTTTGGCGTATGCCGTGTGTTGCCCCGTTTGGAACAGATTATTGCACAATTGGTTGATAAACCATTGTGCGGTAAAAAGCGTATTGTGCATTGCTTGCTGTTGGTC < 1:560448/251‑1 GTATAAAATCTGATACAAACCGACCAACAGCAAGCAATGCACAATACGCTTTTTACCGCACAATGGTTTATCAACCAATTGTGCAATAATCTGTTCCAAACGGGGCAACACACGGCATACGCCAAAGCAAATTTCCTGTAACAACGGCAGATCCTGCGCTTTGATGACCACCTGAGCATCAGGCAACAGGGATGAAAGTGATTTCCCCTGTTCCAGCACCTGAAAAAGAATTTGTACCGCTGCCGTGCGGGCGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/288395‑288651‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggaaaCCACCGCACTTTCCGCCCGCACGGCAGCGGTACAAATTCTTTTTCAGGTGCTGGAACAGGGGAAATCACTTTCATCCCTGTTGCCTGATGCTCAGGTGGTCATCAAAGCGCAGGATCTGCCGTTGTTACAGGAAATTTGCTTTGGCGTATGCCGTGTGTTGCCCCGTTTGGAACAGATTATTGCACAATTGGTTGATAAACCATTGTGCGGTAAAAAGCGTATTGTGCATTGCTTGCTGTTGGTC < 1/288660‑288416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |