| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 2,021,854 | 0 | T | A | 37.3% | 97.1 / 21.0 | 59 | intergenic (+21687/+34902) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Reads supporting (aligned to +/- strand): ref base T (27/10); new base A (0/22); total (27/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.26e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTATCGGAGAAGGCAACCATCGGAGCGCCAATTACAACATTTTTAGCAATAACAGCTTGAGACGTTAATAGGATTCCACCACAAAGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAACACGCGGGAAACCTTGTAACCTTC > 1/2021604‑2022100 | ttATCGGAGAAGGCAACCATCGGAGCGCCAATTACAACATTTTTAGCAATAACAGCTTGAGACGTTAATAGGATTCCACCACAAAGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCAtt > 1:238454/1‑251 (MQ=255) ccATCGGAGCGCCAATTACAACATTTTTAGCAATAACAGCTTGAGACGTTAATAGGATTCCACCACAAAGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTc > 1:271121/1‑248 (MQ=255) aaaTAACAGCTTGAGACTTTAATAGGATCCCACAAAAAAGAAACGAAAGTAGTTTTTTTTTAATAATGCTCCCCCCTTTTACCGGTAAAAAAAAAAACAAAAAAAATTAAAATACTGCTATCCCCCCCCAAAAAAATCAAAGGCA‑AATATAAATTTCACCAATATAAAATTTAAAACAAATCGTCCGTTGATTATCTATATCATAAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGagatag < 1:133422/250‑1 (MQ=255) aaaTAACAGCTTGAGACGTTAATAGGATTCCACCAAAAAGTAACGCAAGTAGTGTTTTTTTCATAATGCTACTCCTTTTTATCGGTAAAACAAATAACAAAAAAAATTAAAATACTGCTATCCCCCACCAAAACAATCATATGCG‑AATATAAATTTCACAAATATACAATTTGAAACAAATCGTCCGTGGAGTATCTATATCATTAAAAGAAGTTTCCCTGCAACCGCCATTTTTTGAAAGTGTGagat < 1:335633/248‑1 (MQ=255) aaaCAGCTTGAGACTTTAATAGGATCCCACCAAAAAGTAACGAAAGTAGTGTTTTTTTAATAATGCTACTCCCTTTTATCGGTTAAACAAATAAAAACAAAAATTAAAATACTGCTATCCCCCCCCACAACAATCATAGGCA‑AATAAAAATTTCACCAATATAAAATTTGAAACAAATCGTCCGTGGAGTATCTATATCATAAAAAGAAGATTCCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATc < 1:35022/250‑1 (MQ=255) cGTTAATAGGATTCCACCACAAAGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTggaa > 1:73078/1‑251 (MQ=255) tAATAGGATTCCACCACAAAGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTggaagga > 1:447697/1‑251 (MQ=255) ttCCACCACAAAGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTaa > 1:71560/1‑251 (MQ=255) ccccccaaaaaGTAACGCAAGTAGTGTTTTTTTCATAATCCTCCTCCCTTTTATGGGTTAAACAAATAACAACAAAAATTGAAATCCTGCTATCCCCCACCACAACAATCATATGCA‑AATATAAATTTCACAAATATACATTTTAAAACAAACCGCCGGTTGAGTTTATATATCATTAAAAGAAGATTTCCGGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAac < 1:80119/243‑1 (MQ=255) aaGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGagat > 1:357877/1‑212 (MQ=255) aaGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCaaa > 1:141043/1‑251 (MQ=255) aaGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCaaa > 1:268475/1‑251 (MQ=255) aaaGTAGTGTTTTTTTAAAAATGCTACTCCCTTTAAGCGTTAAAACGAAAAAAAAAAAAAATTAAAATATTGATATCCCCCACCACAAAAATCATAGGCG‑AATAAAATTTTCACAAAAATACAATTAAAAACAAAGCGTCCGTGGAGTATCTAAACCATTAAAAGAAGATTCCCGACAGCCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACt < 1:54578/250‑1 (MQ=255) tAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAg > 1:266804/1‑178 (MQ=255) aTGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCaa > 1:403331/1‑251 (MQ=255) cctttttATCGGTTAAAAAAATAACAAAAAAAATTAAAATACTGCTATCCCCCACCAAAAAAATCATATGCA‑AATAAAAATTTCACAAATAAAAAATTTAAAACAAATCGCCCGTTGAGTATCTATATAATAAAAAAAAGATTTCCTGAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAact < 1:602801/204‑1 (MQ=255) cccTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGAttt < 1:706168/144‑1 (MQ=255) ggTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAg > 1:154890/1‑251 (MQ=255) ttAAACTAAAAACAACAAAAATTGAAATGCTGTTATCCCCCACCAAAACAAGCATATGCA‑AATAAAAATTTCACCAATAAACAATTTAAAACAATTCTTCCGTTGAATTTCTATATTAGTAAAAGAAGTTTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGa < 1:712299/250‑1 (MQ=255) aaaaaaaaaaaaaaaaaaTTAAAATACTGCTAACCCCCCCCAAAAAAATCATATGCA‑AATAAAAATTTCCCAAATATAAAATTTAAAAAAAATCGCCCGTTGAGTATCTATATAATAAAAAGAAGATTTCCTGAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTcc < 1:518742/238‑1 (MQ=255) aacaaaAAAAATTAAAATACTGCTATCCCCCCCCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTAAAACAAATCGTCCGTTGAGTATCTATATCATAAAAAAAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTc < 1:21794/251‑1 (MQ=255) aaaaaTTAAAATACTGCTATCCCCCACCACAACAATCAAATGAG‑AATAAAAATTTCACAAATAAACAATTTGAAAAAAACCGTCGGTTGAGTATCTATATCATAAAAAGAAGTTTTCCTGAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTc < 1:491721/251‑1 (MQ=255) aaaaTTCTGCAATCCCCCCCCACAACAATCATATGCA‑AATATAAATTTCACCAATATACAATTTGAAACAATCCGTCCGTTGAGTATCTATATCATAAAAAGAATA‑TTCCCGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGaa < 1:634983/250‑1 (MQ=255) aTACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAAtt > 1:243302/1‑251 (MQ=255) tACTGCTATCCCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATAAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAAtattttattt < 1:343670/197‑1 (MQ=255) cTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAaag > 1:97641/1‑96 (MQ=255) cTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTc > 1:508061/1‑232 (MQ=255) cTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGt > 1:193579/1‑251 (MQ=255) cTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGt > 1:394199/1‑251 (MQ=255) cTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGt > 1:514443/1‑251 (MQ=255) gCTATCCCCCCCCACAACAATCATAGGCA‑AATATAAATTTCACCAATATACAATTTAAAACAAATCGTCCGTTGATTATCTATATCATAAAAAGAAGTTTTCCTGCAACCGCCATTTTTTGAAAGTGTGagat < 1:235081/133‑1 (MQ=255) gCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGAc > 1:297031/1‑220 (MQ=255) atcccccACCACAAAAATCATATGAA‑AATATAAATTCCCCCAATAAAAAATTTAAAACAAATCTTCCTTTGATTATTTATATAATAAAAAGAAGATTCCCTGAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGc < 1:44265/248‑1 (MQ=255) ccacAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAgg > 1:245350/1‑198 (MQ=255) caacaaTCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGagatag > 1:183367/1‑121 (MQ=255) aaaTCATATGCA‑AATATAAATTTCACCAATATACAATTTAAAACAAATCGTCCTTTGATTATCTATATCATTAAAAGAAGATTCCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGt < 1:410388/250‑1 (MQ=255) aaaTCATA‑GCGAAATATAAATTCCCCAAAAATACAATTTAAAACAAGCCGCCCTTTGATTATTTATATAATAAAAAAAATATTCCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGt < 1:830316/250‑1 (MQ=255) aataatatGAG‑AATAAAAATTTCACCAATATACAATTTAAAAAAAATCGTCAGTTGAATATTAATATAAATAAAAAAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTc < 1:492257/247‑1 (MQ=255) aaatcaaaggcaaaTAAAAATTTCAACAATAAACAATTTAAAACAATCCGTCCGGTGATTATCTATATCATAAAAAAAAATTTTCCTCAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGt < 1:698742/239‑1 (MQ=255) aaTCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGagat > 1:206399/1‑115 (MQ=255) aTCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGt > 1:454141/1‑249 (MQ=255) cATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGAc > 1:185088/1‑199 (MQ=255) aatGCA‑AATAAAAATTTCACAAAAAAACAATTTAAAACAAATCGTCCGTTGATTATCAATATAATAAAAAGAATATTTCCTGAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATcc < 1:425329/250‑1 (MQ=255) atatAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCtt > 1:822780/1‑251 (MQ=255) aTTTCACAAATATACAATTAAAAACAAATCGCCCGTTGAGTATCTATATAATAAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTc < 1:337214/251‑1 (MQ=255) caaaTATAAAATTTAAAACAAATCGTCCTTTGAGTATCTATATCATAAAAAGAAGTTTCCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGAc < 1:187738/176‑1 (MQ=255) caaaTATAAAATTTAAAAAAAATCGTCCGTTGAGTATCTATATCAAAAAAAAAAGATTTCCTGAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTc < 1:57816/203‑1 (MQ=255) atatACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCt > 1:218958/1‑190 (MQ=255) ataCATTTTAAAACAAATCGTCCTTTGATTTTCTATATCATAAAAAGAATTTTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTc < 1:121136/240‑1 (MQ=255) ataCAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACg > 1:474338/1‑251 (MQ=255) ttGAAAAAAATCTTCCGTTGATTATTTATATAATTAAAAGAGGATTTCCTGAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGc < 1:808413/251‑1 (MQ=255) aaTCGTCTGTTGAGTATTTATATCATAAAAAAAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAaca < 1:440904/251‑1 (MQ=255) gTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAACACGCGGGaa > 1:490410/1‑251 (MQ=255) aGTATTTATATAATAAAAAGAAGATTTCCTGAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAACACGCGGGAAAcc < 1:287693/250‑1 (MQ=255) aagcTATATAATAAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAACACGCGGGAAACCTTg < 1:155448/248‑1 (MQ=255) aTCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTc > 1:716898/1‑210 (MQ=255) tataTCATAAAAAAAAGTTTTCCTGAAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAACACGCGGGAAACCTTGTAAc < 1:67592/251‑1 (MQ=255) atatCATTAAAAAAAGATTCCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAACACGCGGGAAACCTTGTAAcc < 1:56596/251‑1 (MQ=255) atatCATAAAAAGAAGTTTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAACACGCGGGAAACCTTGTAAcc < 1:626233/251‑1 (MQ=255) cATTAAAAGAATTTTCCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAACACGCGGGAAACCTTGTAACcttc < 1:512479/250‑1 (MQ=255) | TTATCGGAGAAGGCAACCATCGGAGCGCCAATTACAACATTTTTAGCAATAACAGCTTGAGACGTTAATAGGATTCCACCACAAAGTAACGCAAGTAGTGTCTTTTTCATAATGCTACTCCCTTTTATCGGTTAAACGAATAACAACAAAAATTGAAATACTGCTATACCCCACCACAACAATCATATGCG‑AATATAAATTTCACCAATATACAATTTGAAACAAATCGTCCGTTGAGTATCTATATCATTAAAAGAAGATTTCCTGCAACCGCCATTTTTTGAAAGTGTGAGATAGATCTTATTTTTTGGAAGGAAAATTTAACTACTGCAAAAATAAACTAAATATTTTATTTTTAGCAAAAAAATAGGAGTCCAAAGACTCCTATGTTCATGCTCAATACGAATTCGTTACGCAACCTCTTCTACGTCTATCCAACGCTTTTGTTCACATGAAAACGCAATAGCATCCAACACGCGGGAAACCTTGTAACCTTC > 1/2021604‑2022100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |