| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,763,573 | 0 | A | C | 42.4% | 114.6 / 10.6 | 59 | intergenic (‑39238/‑10704) | unknown/unknown | tRNA‑Arg‑CCG/tRNA‑Asn‑GTT |
| Reads supporting (aligned to +/- strand): ref base A (32/2); new base C (0/25); total (32/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.16e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATT > 1/1763333‑1763805 | tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGTCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAAccccgcccc > 1:751702/1‑248 (MQ=255)tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAAccccgccgcc < 1:673069/251‑1 (MQ=255)tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAAccccgccgc > 1:384336/1‑250 (MQ=255)tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAAccccgccgc > 1:163552/1‑250 (MQ=255)tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAAccccgccgc > 1:178379/1‑250 (MQ=255)tGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAAccccgccgc > 1:224950/1‑250 (MQ=255) ttttCATGATTTTTTTTACCCGCCCTTCCAACCTCTCCCGGGCGGGGGCGACGAGTGCCATCCACGGGGATAATGCCCGCTCCGGCGGGCGCCAAGTCTTCAATGTCCTGAAAAAACGGGGTGATACGTCCGGGGCTGTCGGGAAGATCCCGTTTGA‑CGATCCCGATGACCGCCACATTTCCGGTCGGG‑CGCACGGTTTTTAAA‑TTGCCCCCCCCTTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGa < 1:770071/250‑1 (MQ=255) tttttttaAACCGCACTTTCAATCTCTCCCGGGCGCGGGCGACGAGTGCCACCCACGGCAATAATGTCCGCTCGGGCGTGCGCCAAGTCTTCAATGTCCTGAAAAAACGGGGTAAAACGTACCGGGCTGGCGGGAAGATCCCGTTAGA‑CGATACCGATGATCGGCACATTTAGGGTGGGG‑CGCCCGGTTTTAAAA‑TTGTCCACCCCTCAAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTgcgc < 1:273734/250‑1 (MQ=255) ttAACCGCTCTTTAAATCTCTCCCGGGCGGGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCAAAGTCTTCAATGTCCTGAAAAAACGGGGTGATCCGTACCGGGCTGCCGGGAAGACCCCGTTTGA‑CGATCCCGATGAGCGGCACTTTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACCCCTTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATagc < 1:688522/251‑1 (MQ=255) ccTTTCAATCTCTCCCGGGCGCGGGCGACGAGTCCCACCCGCGGCGATAATGCCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGAAAAAACGGGGTGATACGTACGGGGCTGTCGGGAAGACCCCGTTTGA‑CGATCCCGATGATCGCCACATTTACGGTGGGG‑CGCACGGTTTTAAAA‑TTGCCCCCACCTCCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACaa < 1:711913/250‑1 (MQ=255) cTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATagcag > 1:564587/1‑244 (MQ=255) cAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTc > 1:473468/1‑250 (MQ=255) cAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTc > 1:156207/1‑250 (MQ=255) acgaGTCCCACCCACGGCGAAAAGGCCCGCCCGGGCGTGCGCAAAGTCTTAAATGTCCTGAAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATCCCGATGATCGGCACATTTACGGTCGGG‑CGCCCGGTTTTTAAA‑TTGTCCACCCCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTAt < 1:816936/251‑1 (MQ=255) ggtcccATCCACGGCGATATTGCCCGCTCCGGCGTCCGCCAAGTCTCCAATGTCCTGAAAAAACGGGGTGATCCGTCCGGGGCTGTGGGGAAGCTCCCTTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGTTTTAAAA‑TTGCCCCCCCCTTCAATGCGCACCCCCCCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATcc < 1:27409/246‑1 (MQ=255) gTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCa > 1:302120/1‑250 (MQ=255) ctGCCATCCACGGCGATATTGCCCCCCCCGGCGGGCCCCAAGTCTTCAATGCCCTGAAAAAGCGGGGTGATACGTACCGGGCTGTCGGGAAGACCCCGTTTGA‑CGATCCCGATGATCGCCACATTTACGGTCGGG‑CGCACGGTTTTTAAA‑TTGCCCACCCCTTCAATGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCAc < 1:17268/250‑1 (MQ=255) gCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAaga > 1:385056/1‑251 (MQ=255) gCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAag > 1:695660/1‑250 (MQ=255) gCGATAATGCCCGCTCCGGCGTGCCCCAATTCTTAAATGCCCTGTAAAAGCGGGGTGATACGTCCGGGGCTGTGGGAAAGACCCGGTTTGA‑CGATCCCGATGATCGGCACATTTACGGTGGGG‑CGCACGGTTTTAAAA‑TTGCCCCCCCCTTAAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAag < 1:49572/250‑1 (MQ=255) tccgcaatgTCTTCAATGTCCTGTAAAACCGGGGTGATCCGTCCCGGGCTGCCGGGAAGACCCCGTTTGA‑CGATCCCGATGATCGGCACATTTACGGTCGGG‑CGCCCGTTTTTTAAT‑TTGCCCCCCCCTTCAATCCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAg < 1:32790/243‑1 (MQ=255) cgccccAATTCTTCAATTTCCTGTAAAAACGGGGTGATGCGTCCCGGGCTGTGGGGAAGACCCCTTTTGA‑CGATCCCGATGACCGGCACATTTACGGTCGGG‑CGCACGTTTTTTAAT‑TTCCCCCCCCCTTCAAGGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAg < 1:482701/247‑1 (MQ=255) gcgcAAAGTCTTAAATGTCCTGAAAAAAGGGGGTGATCCGTCCCGGGCTGTCGGGAAGATCCCTTTTGA‑CGATCCCGATGACCGGCACATTTCGGGTCGGG‑CGCACGGTTTTAAAA‑TTGTCCCCCCCTCCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAg < 1:213955/250‑1 (MQ=255) gcccaaagtcttccttttccttaaaaacCGGGGTTATACTTCCCCGGTTGTGGGGAAGAT‑CCGTTTTACCGATCCCGATGCCCGGCACATTTACGGTCGGG‑CGCCCGTTTTTTAAT‑TTGCCCCCCCCTTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAg < 1:658265/227‑1 (MQ=255) cccccAAGTCTTCAATGTCCTTTAAAACCGGGGTGATCCGTCCCGGGCTGTCGGGAAGACCCCTTTGGA‑CGATACCGATGATCGGCACATTTCCGGTCGGG‑CGCCCGGTTTTTAAA‑TTGCCCCCCCCTCCAATGCGCACCCCCGCCCCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGt < 1:71072/248‑1 (MQ=255) gTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATcc > 1:695858/1‑208 (MQ=255) gTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGa > 1:802073/1‑251 (MQ=255) gTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGa > 1:408434/1‑251 (MQ=255) cTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGaaa > 1:120151/1‑251 (MQ=255) tCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGaaaa > 1:517091/1‑250 (MQ=255) tGTAAAAGCGGGTTGATACGTCCCGGGCTGCGGGGAAGATCCCGTTTGC‑CGATCCCGATGATCGGCACTTTTCGGGTCGGG‑CCCACGGTTTTTAAA‑TTGCCCCCCCCTCCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTtgatg < 1:219745/251‑1 (MQ=255) gTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTtgatga > 1:122239/1‑251 (MQ=255) gTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTtgatga > 1:732253/1‑251 (MQ=255) gggTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTg > 1:688853/1‑223 (MQ=255) gggTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAAtttt > 1:105328/1‑251 (MQ=255) gTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACC‑TTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTga > 1:253554/1‑251 (MQ=255) gATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCAc > 1:97007/1‑183 (MQ=255) gATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTgag > 1:338254/1‑251 (MQ=255) aTACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTgaga > 1:520270/1‑251 (MQ=255) gTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAg > 1:643021/1‑250 (MQ=255) gTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGCGATAATTTTTGAGATAGCTGTGACATAg > 1:82438/1‑251 (MQ=255) gggAAGACCCCTTTTGA‑CTATCCCAATGATCGGCACATTTACGGTGGGC‑CGCACGGTTTTTAAT‑TTGCCCACCCCTTAATTGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGaa < 1:34871/250‑1 (MQ=255) aTACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCgg > 1:40639/1‑248 (MQ=255) ccGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCAt > 1:38904/1‑251 (MQ=255) atgatCGGCACATTTACGGGCGGG‑CGCCCGGTTTTTAAA‑TTGCCCACCCCTTCAAGGCGCACCCCCGCCCCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCAttt < 1:638513/250‑1 (MQ=255) atcgccccaTTTACGGGCGGG‑CGCCCGGTTTTTAAA‑TTGCCCACCCCTTAAATGCGAACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGc < 1:370286/243‑1 (MQ=255) atCGGCACATTTCCGGTCGGG‑CCCACGGCTTTTAAA‑TTGTCCACCCCTCCAAGGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGc < 1:344101/250‑1 (MQ=255) ccacaTTTCCGG‑CGGGCCGCACGGTTTTAAAA‑TTTTCCCCCCCTCCAAGCCGCACCCCCGCCCCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGtta < 1:327310/250‑3 (MQ=255) caTTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCAtt > 1:426486/1‑250 (MQ=255) cgggggggg‑CGCACGTTTTTTAAA‑TTGCCCCCCCCTCCAAGGCCCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:181606/245‑1 (MQ=255) ccGGTCGGG‑CGCCCGG‑TTTTAAATTTGCCCCCCCCTTAAAGGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTc < 1:761483/250‑1 (MQ=255) cccggttttaaaattgccccccccTTCAATCCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACAt < 1:100158/229‑1 (MQ=255) gCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTcta > 1:7590/1‑251 (MQ=255) tttttAAA‑TTCCCCACCCCTCAAATGCACACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGTCATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTctac < 1:671848/250‑1 (MQ=255) ttttAAA‑TTGCCCCCCCCTTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTctact < 1:20873/251‑1 (MQ=255) tttaaaattctccccccctcaaacgcgcACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTctact < 1:626498/227‑1 (MQ=255) ccACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAAtt > 1:553882/1‑251 (MQ=255) ccTTCAATGCGCACCCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGc < 1:214926/205‑1 (MQ=255) ccTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCTATTTATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCttt > 1:689942/1‑187 (MQ=255) | TGGCAAGACAGCCCATTTCATGAATTTTTTTAACCGCACTTTCAATCTCTACCGGGCGCGGGCGACGAGTGCCATCCACGGCGATAATGTCCGCTCCGGCGTGCGCCAAGTCTTCAATGTCCTGTAAAAACGGGGTGATACGTACCGGGCTGTCGGGAAGATCCCGTTTGA‑CGATACCGATGATCGGCACATTTACGGTCGGG‑CGCACGGCTTTTAAA‑TTGTCCACACCTTCAATGCGCAACCCCGCCGCCCCGCCGATAACGGAAGCCTGCGCCATAGCAGCGACAATTTCCGGTTTATCCATCGGACCATTATCCACCGGCTGACAAGAGGCAATTAATCCGTTCTGAAGTTGGGCGAAAACGGCTTGATGAGATAATTTTTGAGATAGCTGTGACATAGAAACTCCTCTTTTTTGCGGCTGCATTTGGCAGTCATTCTAGTCAGTGGAGACATTCTACTAAAATAAAATT > 1/1763333‑1763805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |