| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1762908 | 75 (0.880) | 4 (0.050) | 4/434 | 7.1 | 5.4% | intergenic (‑38573/‑11369) | unknown/unknown | tRNA‑Arg‑CCG/tRNA‑Asn‑GTT |
| ? | 1 | = 1762965 | 68 (0.830) | intergenic (‑38630/‑11312) | unknown/unknown | tRNA‑Arg‑CCG/tRNA‑Asn‑GTT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATTTTTATCTTGCAGTTGATATTCCGCATAAGTCGCCGCCTGCGCATCGTTTAATAAATACACCGGCTTGGACGTATGCTTGGAAAGGCTTTCTTTTAACGGGAAGTAGGCAAGACCGCCCAGGTTTTTCGGATTCAATGCGGTCAATATTCCTTTATTGATGATGCCCGTTGAAGCAACCGCAACGTAATCAAATTGCCCCGCATAATCCGTGAGTAATTGCGCGAGAGTCTGATGCATTGCCGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1762658‑1762908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccgccaTTGTTGCTCAGAACCAAGTTACACAACGGAAACAAATCCATACGCCACAGGAAAATGTGGCGGCGGCAATGCATCAGACTCTCGCGCAATTACTCACGGATTATGCGGGGCAATTTGATTACGTTGCGGTTGCTTCAACGGGCATCATCAATAAAGGAATATTGACCGCATTGAATCCGAAAAACCTGGGCGGTCTTGCCTACTTCCCGTTAAAAGAAAGCCTTTCCAAGCATACGTCCAAGCC < 1/1762965‑1762722 ATTTTTATCTTGCAGTTGATATTCCGCATAAGTCGCCGCCTGCGCATCGTTTAATAAATACACCGGCTTGGACGTATGCTTGGAAAGGCTTTCTTTTAACGGGAAGTAGGCAAGACCGCCCAGGTTTTTCGGATTCAATGCGGTCAATATTCCTTTATTGATGATGCCCGTTGAAGCAACCGCAACGTAATCAAATTGCCCCGCATAATCCGTGAGTAATTGCGCGAGAGTCTGATGCATTGCCGCCGCCA > 1:160233/1‑251 ATAAATACACCGGCTTGGACGTATGCTTGGAAAGGCTTTCTTTTAACGGGAAGTAGGCAAGACCGCCCAGGTTTTTCGGATTCAATGCGGTCAATATTCCTTTATTGATGATGCCCGTTGAAGCAACCGCAACGTAATCAAATTGCCCCGCATAATCCGTGAGTAATTGCGCGAGAGTCTGATGCATTG < 1:104777/189‑1 CAATATTCCTTTATTGATGATGCCCGTTGAAGCAACCGCAACGTAATCAAATTGCCCCGCATAATCCGTGAGTAATTGCGCGAGAGTCTGATGCATTGCCGCCGCCATTGTTGCTCAGAACCAAGTTACACAACGGAAACAAATCCATACGCCACAGGAAAATG > 1:580995/1‑164 ACCGCAACGTAATCAAATTGCCCCGCATAATCCGTGAGTAATTGCGCGAGAGTCTGATGCATTGCCGCCGCCATTGTTGCTCAGAACCAAGTTACACAACGGAAACAAATCCATACGCCACAGGAAAATGTGGCGGCGGCAATGCATCAGACTCTCGCGCAATTACTCACGGATTATGCGGGGCAATTTGATTACGTTGCGGTTGCTTCAACGGGCATCATCAATAAAGGAATATTGACCGCATTGAATC > 1:11097/1‑250 AGTCTGATGCATTGCCGCCGCCATTGTTGCTCAGAACCAAGTTACACAACGGAAACAAATCCATACGCCACAGGAAAATGTGGCGGCGGCAATGCATCAGACTCTCGCGCAATTACTCACGGATTATGCGGGGCAATTTGATTACGTTGCGGTTGCTTCAACGGGCATCATCAATAAAGGAATATTGACCGCATTGAATCCGAAAAACCTGGGCGGTCTTGCCTACTTCCCGTTAAAAGAAAGCCTTTCCA > 1:407081/1‑251 GCATTGCCGCCGCCATTGTTGCTCAGAACCAAGTTACACAACGGAAACAAATCCATACGCCACAGGAAAATGTGGCGGCGGCAATGCATCAGACTCTCGCGCAATTACTCACGGATTATGCGGGGCAATTTGATTACGTTGCGGTTGCTTCAACGGGCATCATCAATAAAGGAATATTGACCGCATTGAATCCGAAAAACCTGGGCGGTCTTGCCTACTTC < 1:622610/221‑1 cCCGCCATTGTTGCTCAGAACCAAGTTACACAACGGAAACAAATCCATACGCCACAGGAAAATGTGGCGGCGGCAATGCATCAGACTCTCGCGCAATTACTCACGGATTATGCGGGGCAATTTGATTACGTTGCGGTTGCTTCAACGGGCATCATCAATAAAGGAATATTGACCGCATTGAATCCGAAAACCCTGGGCGGTCTTGCCTACTTCCCGTTAAAAGAAAGCCTTTCCAAGCATACGTCCAAGCC < 1:690969/250‑1 CCGCCATTGTTGCTCAGAACCAAGTTACACAACGGAAACAAATCCATACGCCACAGGAAAATGTGGCGGCGGCAATGCATCAGACTCTCGCGCAATTACTCACGGATTATGCGGGGCAATTTGATTACGTTGCGGTTGCTTCAACGGGCATCATCAATAAAGGAATATTGACCGCATTGAATCCGAAAAACCTGGGCGGTCTTGCCTACTTCCCGTTAAAAGAAAGCCTTTCCAAGCATACGTCCAAGCC < 1:34698/250‑1 CCGCCATTGTTGCTCAGAACCAAGTTACACAACGGAAACAAATCCATACGCCACAGGAAAATGTGGCGGCGGCAATGCATCAGACTCTCGCGCAATTACTCACGGATTATGCGGGGCAATTTGATTACGTTGCGGTTGCTTCAACGGGCATCATCAATAAAGGAATATTGACCGCATTGAATCCGAAAAACCTGGGCGGTCTTGCCTACTTCCCGTTAAAAGAAAGCCTTTCCAAGCATACGTCCAAGCC < 1:796904/250‑1 ATTTTTATCTTGCAGTTGATATTCCGCATAAGTCGCCGCCTGCGCATCGTTTAATAAATACACCGGCTTGGACGTATGCTTGGAAAGGCTTTCTTTTAACGGGAAGTAGGCAAGACCGCCCAGGTTTTTCGGATTCAATGCGGTCAATATTCCTTTATTGATGATGCCCGTTGAAGCAACCGCAACGTAATCAAATTGCCCCGCATAATCCGTGAGTAATTGCGCGAGAGTCTGATGCATTGCCGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1762658‑1762908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccgccaTTGTTGCTCAGAACCAAGTTACACAACGGAAACAAATCCATACGCCACAGGAAAATGTGGCGGCGGCAATGCATCAGACTCTCGCGCAATTACTCACGGATTATGCGGGGCAATTTGATTACGTTGCGGTTGCTTCAACGGGCATCATCAATAAAGGAATATTGACCGCATTGAATCCGAAAAACCTGGGCGGTCTTGCCTACTTCCCGTTAAAAGAAAGCCTTTCCAAGCATACGTCCAAGCC < 1/1762965‑1762722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |