| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1688138 | 75 (0.880) | 3 (0.040) | 3/432 | 7.6 | 4.0% | intergenic (‑62013/‑11406) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| ? | 1 | = 1688197 | 74 (0.910) | intergenic (‑62072/‑11347) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTTCTAGTGCTGATAAAACCTGTGAAAAATCATGATGTTGTACCATATAATGAGCAGCAGATTGGTTACGCCAATAGAGAAAAGTGCGCTCGCCTTGTTCATCAAGCTGGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATTTGGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1687881‑1688138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catttggcgaaATGTGGCAAAGCTATGGTGGAGATACATTAAATTCGGCCACTTATCTTAGCCGAATGAGTTCGCCAAATGACATTCAAGTTTACTATGTTTCTGCGTTAGGCTCGGATAATTTAAGCGAGCAAATGCGAATGCATTGGCAAGCGGATGGGGTGAATACGGATTGGGTGTTAAAAGATGAAAACCACCAACCAGGTTTATATCTTATCCAGCTTGATGAACAAGGCGAGCGCACTTTTCTCTATTGGCG < 1/1688197‑1687950 TGTTCTAGTGCTGATAAAACCTGTGAAAAATCATGATGTTGTACCATATAATGAGCAGCAGATTGGTTACGCCAATAGAGAAAAGTGCGCTCGCCTTGTTCATCAAGCTGGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATT > 1:114665/1‑251 GTTCTAGTGCTGATAAAACCTGTGAAAAATCATGATGTTGTACCATATAATGAGCAGCAGATTGGTTACGCCAATAGAGAAAAGTGCGCTCGCCTTGTTCATCAAGCTGGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATTT > 1:297817/1‑251 GTTCTAGTGCTGATAAAACCTGTGAAAAATCATGATGTTGTACCATATAATGAGCAGCAGATTGGTTACGCCAATAGAGAAAAGTGCGCTCGCCTTGTTCATCAAGCTGGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATTT > 1:803978/1‑251 TTCTAGTGCTGATAAAACCTGTGAAAAATCATGATGTTGTACCATATAATGAGCAGCAGATTGGTTACGCCAATAGAGAAAAGTGCGCTCGCCTTGTTCATCAAGCTGGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATTTG > 1:437581/1‑251 GCAGCAGATTGGTTACGCCAATAGAGAAAAGTGCGCTCGCCTTGTTCATCAAGCTGGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATTTGGCGAAATGTGGCAAAGCTATGGTGGAGATACATTAAAT > 1:13496/1‑237 TTACGCCAATAGAGAAAAGTGCGCTCGCCTTGTTCATCAAGCTGGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATTTGGCGAAATGTGGCAAAGCTATGGTGGAGATACATTAAATTCGGCCACTTATCTTAGCCGAATGAG < 1:528507/251‑1 TACGCCAATAGAGAAAAGTGCGCTCGCCTTGTTCATCAAGCTGGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATTTGGCGAAATGTGGCAAAGCTATGGTGGAGATACATTAAATTCGGCCACTTATCTTAGCCGAATGAGT < 1:600592/251‑1 GGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATTTGGCG > 1:165428/1‑147 AAATGTGGCAAAGCTATGGTGGAGATACATTAAATTCGGCCACTTATCTTAGCCGAATGAGTTCGCCAAATGACATTCAAGTTTACTATGTTTCTGCGTTAGGCTCGGATAATTTAAGCGAGCAAATGCGAATGCATTGGCAAGCGGATGGGGTGAATACGGATTGGGTGTTAAAAGATGAAAACCACCAACCAGGTTTATATCTTATCCAGCTTGATGAACAAGGCGAGCGCACTTTTCTCTATTGGCG < 1:439987/250‑1 TGTTCTAGTGCTGATAAAACCTGTGAAAAATCATGATGTTGTACCATATAATGAGCAGCAGATTGGTTACGCCAATAGAGAAAAGTGCGCTCGCCTTGTTCATCAAGCTGGATAAGATATAAACCTGGTTGGTGGTTTTCATCTTTTAACACCCAATCCGTATTCACCCCATCCGCTTGCCAATGCATTCGCATTTGCTCGCTTAAATTATCCGAGCCTAACGCAGAAACATAGTAAACTTGAATGTCATTTGGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1687881‑1688138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catttggcgaaATGTGGCAAAGCTATGGTGGAGATACATTAAATTCGGCCACTTATCTTAGCCGAATGAGTTCGCCAAATGACATTCAAGTTTACTATGTTTCTGCGTTAGGCTCGGATAATTTAAGCGAGCAAATGCGAATGCATTGGCAAGCGGATGGGGTGAATACGGATTGGGTGTTAAAAGATGAAAACCACCAACCAGGTTTATATCTTATCCAGCTTGATGAACAAGGCGAGCGCACTTTTCTCTATTGGCG < 1/1688197‑1687950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |