Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,866,221 A→G intergenic (+31780/‑118804) unknown → / → unknown tRNA‑Leu‑CAA/tRNA‑Asp‑GTC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,866,2210AG100.0% 271.0 / NA 75intergenic (+31780/‑118804)unknown/unknowntRNA‑Leu‑CAA/tRNA‑Asp‑GTC
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (39/36);  total (39/36)

ATTGGTTACATTTTGACTGTTGGGAAAATAAGTTATCTTTTTATACTCACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTAATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAACTAATGCTCCGCTCAAAAAG  >  1/1865975‑1866455
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          
aTTGGTTACATTTTGACTGTTGGGAAAATAAGTTATCTTTTTATACTCACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGGTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTGCAGCCGCCCCCACTTCAAAACAGTGTTTGATTc                                                                                                                                                                                                                                        <  1:229122/251‑1 (MQ=255)
                     gggAAAATAAGTTATCTTTTTATACTCACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTagag                                                                                                                                                                                                                    >  1:129649/1‑250 (MQ=255)
                             aaGTTATCTTTTTATACTCACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACg                                                                                                                                                                                                           <  1:776615/251‑1 (MQ=255)
                                    cTTTTTATACTCACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAg                                                                                                                                                                                                     >  1:722087/1‑250 (MQ=255)
                                               cACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTc                                                                                                                                                                                                                                        >  1:532180/1‑204 (MQ=255)
                                               cACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTa                                                                                                                                                                                                             >  1:239013/1‑231 (MQ=255)
                                               cACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCg                                                                                                                                                                                         >  1:541350/1‑251 (MQ=255)
                                               cACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCg                                                                                                                                                                                         >  1:647658/1‑251 (MQ=255)
                                               cACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCACACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCg                                                                                                                                                                                         >  1:787300/1‑251 (MQ=255)
                                                aCTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGa                                                                                                                                                                                        <  1:604414/251‑1 (MQ=255)
                                                         atcatAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTAt                                                                                                                                                                               >  1:884477/1‑251 (MQ=255)
                                                          tcatAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTc                                                                                                                                                                                                                                        <  1:25213/193‑1 (MQ=255)
                                                                 gTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTa                                                                                                                                                                       >  1:615365/1‑251 (MQ=255)
                                                                      ttGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGa                                                                                                                                                                                        <  1:744238/229‑1 (MQ=255)
                                                                      ttGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATAc                                                                                                                                                                                     <  1:678957/232‑1 (MQ=255)
                                                                      ttGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGc                                                                                                                                                                  <  1:591985/251‑1 (MQ=255)
                                                                           aCCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCa                                                                                                                                                             >  1:72566/1‑251 (MQ=255)
                                                                                   gTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTAttt                                                                                                                                                                             >  1:830927/1‑227 (MQ=255)
                                                                                             tACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACtt                                                                                                                                           <  1:115334/251‑1 (MQ=255)
                                                                                                  tCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATc                                                                                                                                      <  1:169969/251‑1 (MQ=255)
                                                                                                     gAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCtat                                                                                                                                   >  1:262977/1‑251 (MQ=255)
                                                                                                         cacaTAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACaa                                                                                                                               >  1:104200/1‑251 (MQ=255)
                                                                                                           caTAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTAc                                                                                                                                                                                                            >  1:873983/1‑172 (MQ=255)
                                                                                                           caTAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGa                                                                                                                                                                                        >  1:975/1‑192 (MQ=255)
                                                                                                           caTAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACt                                                                                                                                            >  1:752839/1‑236 (MQ=255)
                                                                                                            aTAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAAt                                                                                                                            <  1:366111/251‑1 (MQ=255)
                                                                                                                acacAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGAt                                                                                                                        >  1:863392/1‑251 (MQ=255)
                                                                                                                     aTCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTAttt                                                                                                                                                                             <  1:708473/193‑1 (MQ=255)
                                                                                                                        tcGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTc                                                                                                                <  1:149361/251‑1 (MQ=255)
                                                                                                                        tcGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTc                                                                                                                <  1:13270/251‑1 (MQ=255)
                                                                                                                             cAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATc                                                                                                                                      <  1:144902/224‑1 (MQ=255)
                                                                                                                               aTACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTAc                                                                                                                                                                                                            >  1:131906/1‑152 (MQ=255)
                                                                                                                                    acaATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGt                                                                                                    <  1:726518/251‑1 (MQ=255)
                                                                                                                                     caATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTAttt                                                                                                                                                                             <  1:324152/177‑1 (MQ=255)
                                                                                                                                     caATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCt                                                                                                                     >  1:820760/1‑233 (MQ=255)
                                                                                                                                          aCGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGt                                                                                              <  1:690782/251‑1 (MQ=255)
                                                                                                                                             tttCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCt                                                                                                                                     >  1:291754/1‑209 (MQ=255)
                                                                                                                                              ttCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATc                                                                                          <  1:579030/251‑1 (MQ=255)
                                                                                                                                              ttCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATc                                                                                          <  1:383893/251‑1 (MQ=255)
                                                                                                                                                        aaaTAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGa                                                                                                                                                                                        <  1:484831/147‑1 (MQ=255)
                                                                                                                                                        aaaTAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCAcg                                                                                                                                                           >  1:148139/1‑176 (MQ=255)
                                                                                                                                                        aaaTAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTc                                                                                                        <  1:71088/227‑1 (MQ=255)
                                                                                                                                                        aaaTAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGaaa                                                                                >  1:901247/1‑251 (MQ=255)
                                                                                                                                                               aGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGa                                                                                                                                                                                        >  1:723622/1‑140 (MQ=255)
                                                                                                                                                                 cTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATAcc                                                                         >  1:72202/1‑249 (MQ=255)
                                                                                                                                                                   aTGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGt                                                                                                                                                <  1:419160/176‑1 (MQ=255)
                                                                                                                                                                   aTGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGaaa                                                                     >  1:498122/1‑251 (MQ=255)
                                                                                                                                                                   aTGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGaaa                                                                     >  1:810515/1‑251 (MQ=255)
                                                                                                                                                                     gtgATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGt                                                                                                         >  1:167109/1‑213 (MQ=255)
                                                                                                                                                                       gATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAg                                                                               >  1:568352/1‑237 (MQ=255)
                                                                                                                                                                            tgtCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTAtt                                                                                                                                                                              >  1:831268/1‑137 (MQ=255)
                                                                                                                                                                             gtCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGt                                                                                                                                                                                                                        >  1:414564/1‑94 (MQ=255)
                                                                                                                                                                             gtCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGaa                                                                      <  1:217620/240‑1 (MQ=255)
                                                                                                                                                                              tCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAAt                                                           <  1:111071/250‑1 (MQ=255)
                                                                                                                                                                                        gCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATa                                                          <  1:492396/241‑1 (MQ=255)
                                                                                                                                                                                             tttGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTAttt                                                                                                                                                                             <  1:579657/121‑1 (MQ=255)
                                                                                                                                                                                             tttGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATgg                                                                                                                                                 >  1:619136/1‑149 (MQ=255)
                                                                                                                                                                                             tttGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGc                                                                              >  1:178059/1‑216 (MQ=255)
                                                                                                                                                                                              ttGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCt                                                                                                                     >  1:723343/1‑176 (MQ=255)
                                                                                                                                                                                               tGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTggg                                         <  1:696750/251‑1 (MQ=255)
                                                                                                                                                                                                      tgtgCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACtt                                  <  1:269453/251‑1 (MQ=255)
                                                                                                                                                                                                          ccTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTtgtg                              <  1:763942/251‑1 (MQ=255)
                                                                                                                                                                                                                   tCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAAc                     <  1:438524/251‑1 (MQ=255)
                                                                                                                                                                                                                   tCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAAc                     <  1:22135/251‑1 (MQ=255)
                                                                                                                                                                                                                   tCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAAc                     <  1:790321/251‑1 (MQ=255)
                                                                                                                                                                                                                     ggCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACa                                                      <  1:253149/216‑1 (MQ=255)
                                                                                                                                                                                                                     ggCTACAGCCGCCCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAACTa                   >  1:798561/1‑251 (MQ=255)
                                                                                                                                                                                                                             ccgccCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAACTAATGCTc             <  1:414925/249‑1 (MQ=255)
                                                                                                                                                                                                                              cgccCCCACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATc                                                                                          >  1:673235/1‑171 (MQ=255)
                                                                                                                                                                                                                                cccccACTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAACTAATGCTCCGCt         >  1:146628/1‑250 (MQ=255)
                                                                                                                                                                                                                                      cTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAgg                                                                                                                                                                                                                         <  1:18987/36‑1 (MQ=255)
                                                                                                                                                                                                                                      cTTCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAACTAATGCTCCGCTCAAAAAg  >  1:582825/1‑251 (MQ=255)
                                                                                                                                                                                                                                        tCAAAACAGTGTTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTc                                                                                                                >  1:877924/1‑139 (MQ=255)
                                                                                                                                                                                                                                                gtgtTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAACTAATGCTc             <  1:469368/230‑1 (MQ=255)
                                                                                                                                                                                                                                                  gtTTGATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTc                                                                                                                >  1:662264/1‑129 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          
ATTGGTTACATTTTGACTGTTGGGAAAATAAGTTATCTTTTTATACTCACTTACATCATCATAACGTTTATTGTTACCCTGCTGTTTAAGCATTACATTCGGAAACACATAAACACAATCTCGCTCAATACCACAATTACGTTTCTGTATCGAAATAAAAGCTATGTGATGTTGTCCACTTATTGCTATTTTGTAATCTGTGCCTTCATTGTCGGCTACAGCCGCCCCCACTTCAAAACAGTGTTTAATTCCTTGGAAATTGAAGGTAGAGCCTATTACGTTTTAGCAAAATATAGCGATACCTTTATTTTAGCTAAAAGCATTCACGCGACTAATGGTAACTTTTATCTATACAAAATCGATCCTAATTCCTTATGTCACGTTCAAGTAATCAACATGGAAAGCATACCGAAACAACCTGAATAAACAGCTGTTTTTTGGGCGTACTTTGTGAATAAAAACTAATGCTCCGCTCAAAAAG  >  1/1865975‑1866455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑