Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,837,588 T→C intergenic (+3147/‑147437) unknown → / → unknown tRNA‑Leu‑CAA/tRNA‑Asp‑GTC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,837,5880TC100.0% 211.0 / NA 61intergenic (+3147/‑147437)unknown/unknowntRNA‑Leu‑CAA/tRNA‑Asp‑GTC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/25);  total (36/25)

GGTGATACACAGGCTGGTTCGGACGCAACAGCGTCATACCTTTTTCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGTAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCGGGTGGGTAGCAAGCTGTACGAAGTCGCAAGCGATTTTTTGTTGTTGTAATA  >  1/1837342‑1837833
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
ggTGATACACAGGCTGGTTCGGACGCAACAGCGTCATACCTTTTTCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAAtt                                                                                                                                                                                                                                                   >  1:802483/1‑251 (MQ=255)
      acacAGGCTGGTTCGGACGCAACAGCGTCATACCTTTTTCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGAt                                                                                                                                                                                                                                              >  1:497651/1‑250 (MQ=255)
      acacAGGCTGGTTCGGACGCAACAGCGTCATACCTTTTTCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATc                                                                                                                                                                                                                                             <  1:815174/251‑1 (MQ=255)
                 ttCGGACGCAACAGCGTCATACCTTTTTCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTAc                                                                                                                                                                                                                                  <  1:851677/251‑1 (MQ=255)
                               cGTCATACCTTTTTCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACGTTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCAttt                                                                                                                                                                                                                           <  1:357455/244‑1 (MQ=255)
                                gTCATACCTTTTTCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGc                                                                                                                                                                                                                    >  1:488971/1‑250 (MQ=255)
                                       cTTTTTCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCg                                                                                                                                                                                                            <  1:231699/251‑1 (MQ=255)
                                           ttCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAAt                                                                                                                                                                                                        <  1:487501/251‑1 (MQ=255)
                                           ttCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAAt                                                                                                                                                                                                        <  1:476752/251‑1 (MQ=255)
                                                    ggTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGcc                                                                                                                                                                                                                   <  1:457601/231‑1 (MQ=255)
                                                     gTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAACACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGAt                                                                                                                                                                                              >  1:423242/1‑251 (MQ=255)
                                                      tCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATc                                                                                                                                                                                             <  1:631558/251‑1 (MQ=255)
                                                       cACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCa                                                                                                                                                                                            >  1:327602/1‑251 (MQ=255)
                                                         cTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGa                                                                                                                                                                                                                                               >  1:501827/1‑198 (MQ=255)
                                                         cTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAAtg                                                                                                                                                                                                                       <  1:647164/222‑1 (MQ=255)
                                                         cTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAAtg                                                                                                                                                                                                                       >  1:760153/1‑222 (MQ=255)
                                                                    gTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAg                                                                                                                                                                                         <  1:68254/241‑1 (MQ=255)
                                                                              tctcCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCa                                                                                                                                                                     >  1:558597/1‑251 (MQ=255)
                                                                                          gTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGtttt                                                                                                                                                         >  1:382206/1‑251 (MQ=255)
                                                                                           tttCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGa                                                                                                                                                                                                                                               <  1:875282/164‑1 (MQ=255)
                                                                                                aCCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTAc                                                                                                                                                                                                                                  <  1:819438/172‑1 (MQ=255)
                                                                                                                ttCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCa                                                                                                                                   >  1:436479/1‑251 (MQ=255)
                                                                                                                          gAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGaa                                                                                                                         >  1:309859/1‑251 (MQ=255)
                                                                                                                          gAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGaa                                                                                                                         >  1:204663/1‑251 (MQ=255)
                                                                                                                          gAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGaa                                                                                                                         >  1:834150/1‑251 (MQ=255)
                                                                                                                               aCATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAgcgc                                                                                                                                                                                      <  1:43537/185‑1 (MQ=255)
                                                                                                                                cATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAAtctt                                                                                                                    >  1:880170/1‑250 (MQ=255)
                                                                                                                                     aCCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAg                                                                                                                                                                                         >  1:698070/1‑176 (MQ=255)
                                                                                                                                     aCCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCAc                                                                                                                                         >  1:503069/1‑224 (MQ=255)
                                                                                                                                     aCCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCaa                                                                                                              >  1:314827/1‑251 (MQ=255)
                                                                                                                                      cccACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCaaa                                                                                                             >  1:1307/1‑251 (MQ=255)
                                                                                                                                      cccACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCaaa                                                                                                             >  1:853376/1‑251 (MQ=255)
                                                                                                                                                cTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCATAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGt                                                                                                   >  1:450529/1‑251 (MQ=255)
                                                                                                                                                   cAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGtaat                                                                                                <  1:874896/251‑1 (MQ=255)
                                                                                                                                                     aaTTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGtaataa                                                                                              <  1:330119/251‑1 (MQ=255)
                                                                                                                                                               tatTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGtaataa                                                                                              <  1:175201/241‑1 (MQ=255)
                                                                                                                                                                atTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATgg                                                                                    >  1:635668/1‑250 (MQ=255)
                                                                                                                                                                     gCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGa                                                                               >  1:469006/1‑250 (MQ=255)
                                                                                                                                                                         taataaGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCTGATCGATGATCACCGGCACATTGGCGTTACGGGCAATTTTTATCATTTTTTGTACTTCATTTATTGTGCCTTTGCCGTAATCGGACAAGTTCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGTCGGGACaaaa                                                                          >  1:550778/1‑251 (MQ=255)
                                                                                                                                                                         taataaGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGcc                                                                                                                                                                                                                   <  1:549297/114‑1 (MQ=255)
                                                                                                                                                                         taataaGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGAc                                                                                                                                                                                                   >  1:526989/1‑130 (MQ=255)
                                                                                                                                                                                      ccGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTAc                                                                                                                                                                                                                                  >  1:3092/1‑86 (MQ=255)
                                                                                                                                                                                      ccGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAAttgt                                                                                          >  1:332641/1‑222 (MQ=255)
                                                                                                                                                                                      ccGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGt                                                             >  1:304307/1‑251 (MQ=255)
                                                                                                                                                                                        gcgATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTaa                                                           >  1:7667/1‑251 (MQ=255)
                                                                                                                                                                                         cgATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCAGTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTaa                                                           <  1:4181/250‑1 (MQ=255)
                                                                                                                                                                                                gTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCggg                                                   >  1:505133/1‑251 (MQ=255)
                                                                                                                                                                                                 ttCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGttt                                                                                                                                                          >  1:805765/1‑147 (MQ=255)
                                                                                                                                                                                                 ttCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTaa                                                           >  1:160299/1‑242 (MQ=255)
                                                                                                                                                                                                 ttCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCgggt                                                  >  1:12147/1‑251 (MQ=255)
                                                                                                                                                                                                 ttCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCgggg                                                  >  1:648861/1‑250 (MQ=255)
                                                                                                                                                                                                 ttCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCggg                                                   <  1:672535/250‑1 (MQ=255)
                                                                                                                                                                                                           gTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTAc                                                                                                                                                                                                                                  >  1:636141/1‑65 (MQ=255)
                                                                                                                                                                                                                   cGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAGATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCGGGTGGGTAGCAAGCTGTACGa                                <  1:582346/251‑1 (MQ=255)
                                                                                                                                                                                                                   cGGATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCGGGTGGGTAGCAAGCTGTACGa                                <  1:252109/251‑1 (MQ=255)
                                                                                                                                                                                                                    ggATCGATGAGCACCGGCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCGGGTGGGTAGCAAGCTGTACGaa                               >  1:837157/1‑251 (MQ=255)
                                                                                                                                                                                                                     gATCGATGAGCACCGGCTCATTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCGGGTGGGTAGCAAGCTGTACGaa                               <  1:613294/250‑1 (MQ=255)
                                                                                                                                                                                                                                    gCACATTGGCGTTACGGGCAATTTGGATCATTTTTTGTGCTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCGGGTGGGTAGCAAGCTGTACGAAGTCGCAAGCGAttttt               >  1:468758/1‑251 (MQ=255)
                                                                                                                                                                                                                                      acaTTGGCGTTACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGtaat                                                                                                <  1:465263/168‑1 (MQ=255)
                                                                                                                                                                                                                                               ttACGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCGGGTGGGTAGCAAGCTGTACGAAGTCGCAAGCGATTTTTTGTTGTTGtaa    <  1:636692/251‑1 (MQ=255)
                                                                                                                                                                                                                                                 aCGGGCAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCGGGTGGGTAGCAAGCTGTACGAAGTCGCAAGCGATTTTTTGTTGTTGtaata  <  1:500709/251‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
GGTGATACACAGGCTGGTTCGGACGCAACAGCGTCATACCTTTTTCCGAACGGGTCACTAAAAGTGCGGTCAAATTTATCTCCGAAATGAGTTTCAACCCTTTGTCGATAATTTCCTGCTCAGAATGACATTTACCCACAACCGCTTCAAATTCGGACATATTCGGCGTTAATAAGGTCGCACCGCGATAGCGTTCAAAATCCGTCCCTTTCGGATCGATGAGCACCGGCACATTGGCGTTACGGGTAATTTGGATCATTTTTTGTACTTCATTTAATGTGCCTTTGCCGTAATCGGACAAGATCAAAGCGCCGTAATTTTTGACCGCACTTTCTAGTTTTTTCAGCAAATCCGCACTTGTCACGTTCTGGAAATCTTCTTCAAAATCAAGGCGTAATAATTGTTGATGGCGGGACAAAATACGCAATTTGGTAATTGTCGGGTGGGTAGCAAGCTGTACGAAGTCGCAAGCGATTTTTTGTTGTTGTAATA  >  1/1837342‑1837833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑