| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,794,185 | T→C | intergenic (+34758/‑40171) | unknown → / → unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,794,185 | 0 | T | C | 97.3% | 216.3 / NA | 75 | intergenic (+34758/‑40171) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (34/39); total (35/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGTGTCACCAGCAGGAAGTTCTCACCGCAATTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTTTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAACGGCATGAATTCGGATCCAGTTGGTCAACCAAAGCCAAGGC > 1/1793943‑1794425 | cGGTGTCACCAGCAGGAAGTTCTCACCGCAATTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCcatca < 1:496808/251‑1 (MQ=255)cGGTGTCACCAGCAGGAAGTTCTCACCGCAATTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCcatca < 1:136177/251‑1 (MQ=255) tCACCAGCAGGAAGTTCTCACCGCAATTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGc < 1:613491/251‑1 (MQ=255) cACCAGCAGGAAGTTCTCACCGCAATTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCa > 1:474915/1‑251 (MQ=255) cACCAGCAGGAAGTTCTCACCGCAATTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCa > 1:271532/1‑251 (MQ=255) cAATTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAAt > 1:954/1‑250 (MQ=255) cAATTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTAAAGT‑GCGCAAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGAAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATCCGAAAACCGCCGCTGGCATGTAAATc < 1:705219/251‑1 (MQ=255) aaaTTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTAAAAT‑GCGCCAAACGAAAAACTTGTTCCAGGGGTGAGGCGTTAATGCGGATTGGCAAAAAATCAAAATCTTCCATGCTGGTAAGCACGGTAACGCAAATAAGCAACGGAGCATCTTTGCCATAAGGCTCGAGAATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAAt < 1:662067/249‑1 (MQ=255) acgacgCAAAATTCCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACAAATAACTTGTTCCATGGGTGAGGCTTTAATGCCGATTTGCAAAAAACCCAATCCTTCCATGCTGGTCAGCCCGGTAACGCCAATTAGCAACGGACCATCTTTGCCATAAGGCGCGAGAATTTTCTTGGCTTTTTCAATCAAACGCAAACCGCCGCTGGCATGTAAATccacca < 1:173512/251‑1 (MQ=255) aaaaaTTTCCACTTCTTGCGGTGAACAACCCCCGCCGTCCAGCCCGGCTCGTTGGGTCAAAT‑GCGCCAAACAAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGAAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGAAAACCGCCGCTGGCATGTAAATCCACCATCCaaa < 1:632434/250‑1 (MQ=255) aaaTTTCCACTTCTGGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTGGTCTCATGGGGGAGGGGTTAATGCCGATTTGCAAAAAACCCAAATCTCCCATGCTGGTAAGCACGTTACCGCCAATAAGCACCGGGGCATCTTTGCCATAAGGCTCGGGGTTTTTCTGGGCTTCTTCCATCATACGAAAACCGCCGCTGGCATGTAAATCCACCATCCAAACg < 1:424686/251‑1 (MQ=255) ccattctgGCGGTGAAAAACCCACGCCGTCCGGACCGCCTGGTTGGGT‑AAATGGCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAAGGCCGTTTTGAAATAAATCCAAATCTTCCTTGCTGGTAAGCACAGTAACGCCAATTAGCAACGGAGAATCTTTGCAATAAGGCTCAAGGATTTATTTGGCTTCTTCCATCAAACACAACCCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAAt < 1:183707/248‑1 (MQ=255) cACTTCTTGCGGAGAAAAACCCACGCCTTCAAACCCGGCTGGTGGGGTCAATG‑GCGCGAAACAAATATTTTGTCCCATGGGGGAGGGGTAAGGGCCAATTTGAAAAAAACCCAAATTTTCAATCCTGGTCAGCAGGGTAACGCGAGTAGGCACGGGAGCATCTTTGCCATAAGGCTCGGGGATTTTCTTGGTTTCTTCCATCATGGGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAAt < 1:441712/251‑1 (MQ=255) cttcttGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCa > 1:858471/1‑221 (MQ=255) cAAACCCCGCCGTCCAGCCCGGCTCGTGGGGTAAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCAAATTTGCAATAAACCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCACCGGAGCATCTTTGCCATAGGGCTCGAGGATTTTCTTGGCTTCTTCAATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCAc < 1:828708/251‑1 (MQ=255) aaaaCCACGCCGTCCAGCCCGGCTCGTTGGGTAAAAT‑GCCCCAAACGAATAACTTGTCCCAGGGGTGAGGCGTTAATGCCGGTTTGAAATAAACCAAAATCTCCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCAAAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGAAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCAc < 1:448261/250‑1 (MQ=255) aaaaCCACGCCGCCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGGGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCAATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGAAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCAc < 1:448339/250‑1 (MQ=255) aaCCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCg > 1:713487/1‑251 (MQ=255) cGTCCAGGCCGGCTCGTTGGGTAAAAT‑GCGCCAAACGAATAACTTGTTCCAGGGGTGAGGCTTTAATGCGGTTTTCAAATAAACCCAATTCTCCCATTCTGGTCAGCACGGTAACGCCATTTACCACCGGAGCTTCTTTGCCAAAAGGCTCGAGGTTTTTCTTGGCTTCTCCCATCACCCGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCt < 1:613044/251‑1 (MQ=255) cGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGGGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAGGGCTCGAGGATTTTCTTGGCTTCTTCCATCATCCGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCt < 1:262637/251‑1 (MQ=255) cGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCt < 1:403512/251‑1 (MQ=255) gTCCAGACCGGTTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGc < 1:425879/181‑1 (MQ=255) gTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGTATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCAAGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGGTTTTTCCATCATACGCAAACCGTCTCTGGCATGTAAATCCACCATc > 1:293322/1‑211 (MQ=255) gTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTa > 1:27248/1‑251 (MQ=255) gTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTa > 1:211585/1‑251 (MQ=255) cggACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTGGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCAAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAGGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCg < 1:439332/249‑1 (MQ=255) aCCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTCCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGTTTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCgtg < 1:36477/250‑1 (MQ=255) ggCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAAc > 1:850605/1‑176 (MQ=255) cTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCATTTAGCAACGGGGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATCCGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGa < 1:658926/251‑1 (MQ=255) ggTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATccac > 1:585867/1‑189 (MQ=255) ggTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCT‑GTCAGCACGGTAACGGCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCCTGGCTTCTTCCATCATACGCAAACCCCCCCTGGCATGTAAATCCACCCTCCAAACGCCTAAATCCGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATg > 1:503656/1‑251 (MQ=255) gTCAAAT‑GCGCCAACCGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCAt < 1:92914/250‑1 (MQ=255) cgcCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCAt > 1:454656/1‑183 (MQ=255) cgcCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACg > 1:184387/1‑190 (MQ=255) aCGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAAt > 1:589899/1‑248 (MQ=255) aCGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCaa > 1:162298/1‑251 (MQ=255) aCGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCaa > 1:779639/1‑251 (MQ=255) gAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGc < 1:499661/203‑1 (MQ=255) aaCTTGTTCCATGGGTGGGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCAAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCt < 1:834685/211‑1 (MQ=255) aCTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAat > 1:829047/1‑224 (MQ=255) cTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCt > 1:314048/1‑209 (MQ=255) gTTCCATGGGTGAGGCGTTAATGCCGTTTTGAAATAAACCCAAATCTTCCAGGCTGGTCAGCGCGGTACCGCCAATTAGCAACGGACCATCTTTCCCATAAGGCTCGAGGATTTTCTTGGCTTCTCCCATCATCCGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGctc < 1:585374/201‑1 (MQ=255) gTTCCATGGGTGAGGCGTTAATGCCGATTTGCTATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCa > 1:160930/1‑251 (MQ=255) ttCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCaa > 1:256304/1‑251 (MQ=255) cATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGTTACCGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTCCCATCATCCGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAAt < 1:362089/251‑1 (MQ=255) cATGGGTGAGGCGTTAATGCCAATTTGAAATAAACCCAAATCTCCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACACAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAAt < 1:284681/251‑1 (MQ=255) ggTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCt > 1:586906/1‑198 (MQ=255) tGAGGCGTTAATGCCGATTTGCAATAAACCCAAATCTTCCATGCTGGTTAGCACGGTAACGCAAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTGGGCTTCTCCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGc < 1:435571/250‑1 (MQ=255) cGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCAAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGt < 1:554359/251‑1 (MQ=255) tAATGCCGATTTGCAATAAATCCAAATCTTCCATGCGGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAAc < 1:470378/251‑1 (MQ=255) tGCCGATTGGCAAAAAATCCAAATCTCCCATGCTGGTCAGCACGGTACCGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTCCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGc < 1:642487/251‑1 (MQ=255) aTTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTa > 1:186023/1‑250 (MQ=255) ttGCAATAAACCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGTTTTTCTTGGCTTCTCCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACaa < 1:474678/251‑1 (MQ=255) aaaTCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCAc > 1:629465/1‑161 (MQ=255) aTCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTg > 1:661747/1‑250 (MQ=255) aTCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTg > 1:603565/1‑250 (MQ=255) tCCAAATCTTCCATGCTGGTCAGCACGGTACCCCCAATTAACAACGGAGCTTCTTTGCCATAAGGCTGGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCAc < 1:710698/158‑1 (MQ=255) aaaTCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGTTTTTCTTGGCTTCTCCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTAc < 1:10238/167‑1 (MQ=255) tCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGcgt > 1:356138/1‑251 (MQ=255) cTTCCATGCTGGTCAGCACGGTACCGCCAATTAGCAGCGGAGCATCTTTGCCATAAGGCTGGAGGTTTTTCTTGGCTTCTTCAATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATc < 1:777849/193‑1 (MQ=255) cTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTg < 1:38748/226‑1 (MQ=255) cTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGcgt > 1:699500/1‑250 (MQ=255) aTGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTaaa > 1:867618/1‑251 (MQ=255) aTGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTaaa > 1:816515/1‑251 (MQ=255) cGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCg > 1:705840/1‑251 (MQ=255) ccAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAAGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTaa > 1:455721/1‑251 (MQ=255) cGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAACGGCATGAAt > 1:704241/1‑251 (MQ=255) tCTTTGCCATAAGGCTCGAGGATTTTCTGGCCTTCTCCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAAc < 1:674100/235‑1 (MQ=255) ttGCCATAAGGCTCGAGGATTTTCTTGGCTTCTCCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAAc < 1:646525/177‑1 (MQ=255) ccATAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAACGGCATGAATTCGGATCCAGtt < 1:874712/250‑1 (MQ=255) aTAAGGCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAACGGCATGAATTCGGATCCAGTTGGt > 1:728564/1‑251 (MQ=255) tAAGGCTCGAGGTTTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAACGGCATGAATTCGGATCCAGTTGGTc < 1:783252/251‑1 (MQ=255) ggCTCGAGGATTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAACGGCATGAATTCGGATCCAGTTGGTCaa > 1:103899/1‑250 (MQ=255) aTTTTCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAACGGCATGAATTCGGATCCAGTTGGTCAACCAAAGCCaa > 1:55690/1‑251 (MQ=255) ttCTTGGCTTCTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTCAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAACGGCATGAATTCGGATCCAGTTGGTCAACCAAAGCCAAGGc < 1:652050/251‑1 (MQ=255) | CGGTGTCACCAGCAGGAAGTTCTCACCGCAATTACGACGCAAAATTTCCACTTCTTGCGGTGAACAAACCACGCCGTCCAGACCGGCTCGTTGGGTCAAAT‑GCGCCAAACGAATAACTTGTTCCATGGGTGAGGCGTTAATGCCGATTTGCAATAAATCCAAATCTTCCATGCTGGTCAGCACGGTAACGCCAATTAGCAACGGAGCATCTTTGCCATAAGGCTCGAGGATTTTCTTGGCTTTTTCCATCATACGCAAACCGCCGCTGGCATGTAAATCCACCATCCAAACGCCTAAATCGGCCGCAGAACGCACCGCTCTTGCTACCGTGTTCGGAATATCATGGAATTTTAAATCAAGGAAAACATCAAAATGACGCTTATGTAACTGCTTTACAAAATTCGTGCCAAGCGTCGTAAACATTTCCTTTCCGACTTTTAAACGGCATGAATTCGGATCCAGTTGGTCAACCAAAGCCAAGGC > 1/1793943‑1794425 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |