| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 230,755 | G→A | intergenic (+94636/+32398) | unknown → / ← unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 230,755 | 0 | G | A | 100.0% | 282.3 / NA | 84 | intergenic (+94636/+32398) | unknown/unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (33/51); total (33/51) | |||||||||||
TACCGGTTTTGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCGGTTTTTAGGCTACTCTATAAGGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTACCTTTGTATTTAGCCCTACCGTGCTTA > 1/230508‑230941 | tACCGGTTTTGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAc < 1:512397/251‑1 (MQ=255)tACCGGTTTTGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAc < 1:692658/251‑1 (MQ=255)tACCGGTTTTGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAc < 1:728852/251‑1 (MQ=255)tACCGGTTTTGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAAGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAc < 1:504509/251‑1 (MQ=255) aCCGGTTTTGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAcc < 1:368540/251‑1 (MQ=255) aCCGGTTTTGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAcc < 1:140292/251‑1 (MQ=255) aCCGGTTTTGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAcc < 1:593522/251‑1 (MQ=255) tttGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTAc < 1:884277/251‑1 (MQ=255) gCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACtt > 1:632912/1‑250 (MQ=255) cGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTc < 1:825191/250‑1 (MQ=255) tATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTcaca < 1:372050/251‑1 (MQ=255) tATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTcac < 1:594306/250‑1 (MQ=255) tATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTcac < 1:139539/250‑1 (MQ=255) tATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTcac < 1:167547/250‑1 (MQ=255) aTCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAc > 1:271819/1‑237 (MQ=255) tCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATg > 1:786890/1‑251 (MQ=255) cGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAg < 1:30211/251‑1 (MQ=255) cGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAg < 1:386817/251‑1 (MQ=255) ccATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAggg < 1:18074/251‑1 (MQ=255) ccATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAgg < 1:790904/250‑1 (MQ=255) aTAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCa > 1:840838/1‑251 (MQ=255) cccGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGaaa > 1:401031/1‑251 (MQ=255) gCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAc < 1:846299/208‑1 (MQ=255) aTCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCaacaac > 1:314223/1‑250 (MQ=255) cgGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGa > 1:771318/1‑251 (MQ=255) gATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAggg > 1:487337/1‑226 (MQ=255) gACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTAc < 1:192578/203‑1 (MQ=255) aGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAActc < 1:887799/250‑1 (MQ=255) gCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAc > 1:517903/1‑188 (MQ=255) ccGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGAc < 1:335086/251‑1 (MQ=255) gTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCt < 1:876145/250‑1 (MQ=255) gATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTAccc > 1:654091/1‑250 (MQ=255) cggcggcggATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAg < 1:314374/251‑1 (MQ=255) cggcggcggATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAg < 1:28163/251‑1 (MQ=255) cggcggcggATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAg < 1:251684/251‑1 (MQ=255) gcggcggATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAgg < 1:855852/250‑1 (MQ=255) gcggcggATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAgg < 1:726545/250‑1 (MQ=255) cggcggATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAgggg < 1:29989/251‑1 (MQ=255) gaagaagaaATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACata > 1:79478/1‑251 (MQ=255) gaagaaATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGAc > 1:526395/1‑160 (MQ=255) gaaATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAG‑TTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATAttcttt > 1:267835/1‑250 (MQ=255) aaaTTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGAc > 1:106882/1‑220 (MQ=255) aaaTTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATAttctttc < 1:489321/251‑1 (MQ=255) cGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGAc > 1:94794/1‑204 (MQ=255) cGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAgg < 1:628027/218‑1 (MQ=255) gTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATc > 1:23357/1‑248 (MQ=255) atgaCCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAAt < 1:283175/251‑1 (MQ=255) aCCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTaa < 1:194234/208‑1 (MQ=255) ccTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATAttctttct > 1:690926/1‑228 (MQ=255) ccTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATg > 1:647540/1‑251 (MQ=255) aaGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTcc < 1:98651/251‑1 (MQ=255) gATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCtt > 1:501209/1‑251 (MQ=255) cGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTcc < 1:846319/251‑1 (MQ=255) cAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAggg > 1:514842/1‑144 (MQ=255) aGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTAc < 1:589815/123‑1 (MQ=255) gCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCcaca < 1:621219/201‑1 (MQ=255) cAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCCCTCTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCt < 1:848992/248‑1 (MQ=255) ccGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATAc < 1:322264/251‑1 (MQ=255) aTGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTa > 1:633869/1‑251 (MQ=255) tGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTa > 1:771822/1‑250 (MQ=255) gTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTta > 1:167692/1‑239 (MQ=255) gTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATAc > 1:95376/1‑244 (MQ=255) ttAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTacac < 1:575243/251‑1 (MQ=255) ttAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTacac < 1:874880/251‑1 (MQ=255) aaaCATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTAcccc > 1:92433/1‑166 (MQ=255) tGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTATTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTAcc < 1:429235/248‑1 (MQ=255) tGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAg < 1:647587/167‑1 (MQ=255) tGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACCTCACATGCC‑‑CTTCAAAGGGCATATg > 1:866767/1‑123 (MQ=255) gTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATAttctttc > 1:215013/1‑183 (MQ=255) gaagaagaCAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAg > 1:102118/1‑110 (MQ=255) gaagaCAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCt < 1:877164/148‑1 (MQ=255) aagaCAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTACCTTTGTATTTAGc < 1:73772/251‑1 (MQ=255) aaTCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTACCTTTGTATTTAGCCCTAc < 1:299459/251‑1 (MQ=37) aaTCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTACCTTTGTATTTAGCCCTAc < 1:86947/251‑1 (MQ=37) cgccgAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGCCCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATACCTCTATGCCCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGACTCCTTATATACTCCTACACTACCTTTGTATTTAGCCCTACCGTGc < 1:343786/247‑1 (MQ=11) gAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCaa > 1:734879/1‑90 (MQ=255) gAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAg < 1:52692/92‑1 (MQ=255) gAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAgg > 1:287631/1‑145 (MQ=255) gAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAAt < 1:860568/182‑1 (MQ=18) gAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTcc < 1:670097/216‑1 (MQ=18) gAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTACCTTTGTATTTAGcc > 1:409492/1‑238 (MQ=18) gAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTACCTTTGTATTTAGc < 1:886561/237‑1 (MQ=18) gAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTACCTTTGTATTTAGCCCTACCGTGCTTa > 1:298880/1‑250 (MQ=17) gAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCAGTTTTTAGGCTACTCTATAAAGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTACCTTTGTATTTAGCCCTACCGTGCTTa > 1:74886/1‑250 (MQ=17) | TACCGGTTTTGCGTATCACCGAAATCGCCATAAAAACCCGACAGCCATCGCGGATGACGAGGTGCCGGTAAGATTATCGGCGGCGGATGAAGAAGAAATTGCTTCCGAATTCGTGATGACCTCCGAAGATGCGTCAGCAAGTTTAACCGAAATGTTAAACATGGTAGAAGAAGACAATCACGCGGAATAAGATTCCTGTAAATAACAATCCGCACGTAAAACGTGCGGTTTTTAGGCTACTCTATAAGGACCTAGTACTTCACATGCC‑‑CTTCAAAGGGCATATGAAAACCAACAACCGTGAAATAACTCTATGACCTACCCCTTAAAGGGGTCCACATATTCTTTCTTCGATAAATTATCCTGAATCATGTCTTCCTTTTCCTGATTCCTTATATACTCCTACACTACCTTTGTATTTAGCCCTACCGTGCTTA > 1/230508‑230941 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |