Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,165,798	T→C	intergenic (‑55416/‑140767)	unknown ← / → unknown	tRNA‑Gly‑GCC/tRNA‑Met‑CAT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,165,798	0	T	C	100.0%	176.0 / NA	53	intergenic (‑55416/‑140767)	unknown/unknown	tRNA‑Gly‑GCC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (20/33);  total (20/33)

ATTTTGTTATTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTTGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGAAACTTTTCAGCTATACTGACGCGATTTTTTTGACTCG  >  1/1165554‑1166013                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                        aTTTTGTTATTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGAACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACg                                                                                                                                                                                                                   >  1:437777/1‑251 (MQ=255)        tATTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtc                                                                                                                                                                                                            <  1:763314/251‑1 (MQ=255)         aTTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtcc                                                                                                                                                                                                           <  1:338704/251‑1 (MQ=255)             ggTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtccctc                                                                                                                                                                                                        <  1:570935/250‑1 (MQ=255)                 gTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCcgcg                                                                                                                                                                                                   >  1:885334/1‑251 (MQ=255)                   aGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTa                                                                                                                                                                                                 >  1:391715/1‑251 (MQ=255)                        tGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATaa                                                                                                                                                                                            <  1:806658/251‑1 (MQ=255)                        tGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATaa                                                                                                                                                                                            <  1:562445/251‑1 (MQ=255)                         gCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtcc                                                                                                                                                                                                           >  1:118418/1‑235 (MQ=255)                             cTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTg                                                                                                                                                                                        <  1:277332/250‑1 (MQ=255)                             cTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTg                                                                                                                                                                                        <  1:259095/250‑1 (MQ=255)                             cTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTg                                                                                                                                                                                        <  1:58434/250‑1 (MQ=255)                                                 cacgGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCcgcg                                                                                                                                                                                                   >  1:376939/1‑219 (MQ=255)                                                   cgGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtcc                                                                                                                                                                                                           <  1:662622/209‑1 (MQ=255)                                                     gATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGAt                                                                                                                                                                                                                      >  1:530818/1‑196 (MQ=255)                                                     gATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTc                                                                                                                                                                        >  1:387527/1‑242 (MQ=255)                                                     gATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTg                                                                                                                                                               >  1:818466/1‑251 (MQ=255)                                                     gATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTg                                                                                                                                                               >  1:676078/1‑251 (MQ=255)                                                              gTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAAt                                                                                                                                                                          >  1:108555/1‑231 (MQ=255)                                                               ttCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCt                                                                                                                                                     <  1:485627/251‑1 (MQ=255)                                                                     gcggcATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGcc                                                                                                                                                <  1:293325/250‑1 (MQ=255)                                                                          aTTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGc                                                                                                                                          <  1:579283/251‑1 (MQ=255)                                                                                gCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAg                                                                                                                                                                                          <  1:756964/197‑1 (MQ=255)                                                                                 cAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAg                                                                                                                                   <  1:527091/251‑1 (MQ=255)                                                                                          tCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATa                                                                                                                          <  1:129087/251‑1 (MQ=255)                                                                                             ggATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGc                                                                                                                                          <  1:450584/232‑1 (MQ=255)                                                                                               aTTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATc                                                                                                                      <  1:466710/250‑1 (MQ=255)                                                                                               aTTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATc                                                                                                                      <  1:860544/250‑1 (MQ=255)                                                                                               aTTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATc                                                                                                                      <  1:498871/250‑1 (MQ=255)                                                                                                  gCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACtt                                                                                                                  >  1:375477/1‑251 (MQ=255)                                                                                                   cTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACtt                                                                                                                  >  1:691035/1‑250 (MQ=255)                                                                                                     ttCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtccctcc                                                                                                                                                                                                       <  1:149791/163‑1 (MQ=255)                                                                                                     ttCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAAt                                                                                                                           <  1:215003/239‑1 (MQ=255)                                                                                                      tCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAgggg                                                                                                                                <  1:427524/233‑1 (MQ=255)                                                                                                         tggtgAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGa                                                                                                            <  1:878030/250‑1 (MQ=255)                                                                                                         tggtgAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGa                                                                                                            <  1:69247/250‑1 (MQ=255)                                                                                                                   gACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGc                                                                                                                                          >  1:799395/1‑210 (MQ=255)                                                                                                                                gTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGATGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATaa                                                                                                                         <  1:446079/214‑1 (MQ=255)                                                                                                                                gTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAg                                                                                                               <  1:689311/224‑1 (MQ=255)                                                                                                                                                       aaaaaCACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAagag                                                             <  1:832891/251‑1 (MQ=255)                                                                                                                                                           acacAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAg                                                                                                                                                                                          >  1:536613/1‑122 (MQ=255)                                                                                                                                                                   gCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTatat                                                  <  1:503373/250‑1 (MQ=255)                                                                                                                                                                              atatTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATAtt                                                                                                <  1:197627/193‑1 (MQ=255)                                                                                                                                                                              atatTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTAc                                             <  1:178023/244‑1 (MQ=255)                                                                                                                                                                              atatTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGaa                                      >  1:759628/1‑251 (MQ=255)                                                                                                                                                                                atTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGcc                                                                                                                                                >  1:59546/1‑143 (MQ=255)                                                                                                                                                                                            aGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTg                                                                               <  1:587407/196‑1 (MQ=255)                                                                                                                                                                                             ggCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATaa                                                                                                                                                                                                               >  1:640669/1‑67 (MQ=255)                                                                                                                                                                                                 ggAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAg                                                                                                                                   >  1:760573/1‑139 (MQ=255)                                                                                                                                                                                                      aaTTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATaaa                                                                                                                        <  1:540257/145‑1 (MQ=255)                                                                                                                                                                                                                atCCTGTAGGTGGGCTTGTCCCACC‑TTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGa                                                                                                            <  1:549716/146‑1 (MQ=255)                                                                                                                                                                                                                  ccTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGAAACTTTTCAGCTATACTGACGCGATTTTTTTGACTCg  >  1:535821/1‑251 (MQ=255)                                                                                                                                                                                                                                     cACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGAAACTTTTCAGCTATAc                       >  1:682517/1‑211 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                        ATTTTGTTATTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTTGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGAAACTTTTCAGCTATACTGACGCGATTTTTTTGACTCG  >  1/1165554‑1166013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑