Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 779,318 T→C intergenic (+44386/+42559) unknown → / ← unknown tRNA‑Asn‑GTT/tRNA‑Thr‑GGT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1779,3180TC100.0% 282.2 / NA 80intergenic (+44386/+42559)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Thr‑GGT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/45);  total (35/45)

ATAGATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTGGATTTAATTCTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAACATAAATATGCTAATAAGATTAAGCATATAAAAACAAATATGTTTTTATGCG  >  1/779077‑779548
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                      
ataGATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTtc                                                                                                                                                                                                                               <  1:647162/251‑1 (MQ=255)
   gATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTtctc                                                                                                                                                                                                                             >  1:494770/1‑250 (MQ=255)
    atatGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCg                                                                                                                                                                                                                           >  1:623180/1‑251 (MQ=255)
             cGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAAc                                                                                                                                                                                                                  <  1:96777/251‑1 (MQ=255)
                     atTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCg                                                                                                                                                                                                                >  1:500174/1‑245 (MQ=255)
                     atTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCg                                                                                                                                                                                                                >  1:362266/1‑245 (MQ=255)
                     atTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCaaa                                                                                                                                                                                                          >  1:313485/1‑251 (MQ=255)
                      ttATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCg                                                                                                                                                                                                                <  1:392137/244‑1 (MQ=255)
                               gTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATAc                                                                                                                                                                                                 <  1:506439/250‑1 (MQ=255)
                               gTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATAc                                                                                                                                                                                                 <  1:727580/250‑1 (MQ=255)
                                   cTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAAc                                                                                                                                                                                                                  <  1:630338/229‑1 (MQ=255)
                                   cTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATActtctt                                                                                                                                                                                            >  1:897615/1‑251 (MQ=255)
                                     aCATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAAc                                                                                                                                                                                                                  <  1:545803/227‑1 (MQ=255)
                                     aCATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCg                                                                                                                                                                                                                <  1:179950/229‑1 (MQ=255)
                                       aTAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAAc                                                                                                                                                                                                                  >  1:198054/1‑225 (MQ=255)
                                       aTAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCg                                                                                                                                                                                                                <  1:734928/227‑1 (MQ=255)
                                        tAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGaa                                                                                                                                                                                       <  1:726771/251‑1 (MQ=255)
                                          ggATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAg                                                                                                                                                                                     >  1:715473/1‑251 (MQ=255)
                                          ggATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAg                                                                                                                                                                                     >  1:413180/1‑251 (MQ=255)
                                               gTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAAcc                                                                                                                                                                                                                 <  1:522284/218‑1 (MQ=255)
                                                  tttGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACtt                                                                                                                                                                             <  1:699369/251‑1 (MQ=255)
                                                           gTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCTGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACATTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTATCCGTTATCTAACCGAGc                                                                                                                                                                                                             >  1:803430/1‑210 (MQ=255)
                                                           gTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATAc                                                                                                                                                                                                 <  1:498433/222‑1 (MQ=255)
                                                           gTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTa                                                                                                                                                                    >  1:766805/1‑251 (MQ=255)
                                                              ctctAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGAt                                                                                                                                                                 <  1:647767/251‑1 (MQ=255)
                                                              ctctAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGAt                                                                                                                                                                 <  1:135709/251‑1 (MQ=255)
                                                              ctctAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGAt                                                                                                                                                                 <  1:461262/251‑1 (MQ=255)
                                                                ctAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAAtt                                                                                                                                                                                                                                 <  1:582745/185‑1 (MQ=255)
                                                                ctAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAg                                                                                                                                                               >  1:601556/1‑251 (MQ=255)
                                                                         tGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTg                                                                                                                                                      <  1:539476/251‑1 (MQ=255)
                                                                                            tttCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCatat                                                                                                                                   <  1:207205/251‑1 (MQ=255)
                                                                                                  tGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGc                                                                                                                             <  1:34330/251‑1 (MQ=255)
                                                                                                   gCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGaa                                                                                                                                                                                       >  1:405738/1‑192 (MQ=255)
                                                                                                         aCTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCataat                                                                                                                      <  1:337669/251‑1 (MQ=255)
                                                                                                         aCTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTCCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCataa                                                                                                                       <  1:454064/250‑1 (MQ=255)
                                                                                                          cTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCGAAAAACAATACTTCTTCGGaa                                                                                                                                                                                       <  1:554187/185‑1 (MQ=255)
                                                                                                          cTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAg                                                                                                                                                                   >  1:560993/1‑205 (MQ=255)
                                                                                                          cTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCataata                                                                                                                     >  1:575225/1‑251 (MQ=255)
                                                                                                            aTCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATaataat                                                                                                                   >  1:316304/1‑251 (MQ=255)
                                                                                                            aTCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCATCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCa                                                                                                                                      <  1:17167/232‑1 (MQ=255)
                                                                                                               aTACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAgg                                                                                                                              <  1:535723/237‑1 (MQ=255)
                                                                                                                 aCAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTc                                                                                                                >  1:54255/1‑249 (MQ=255)
                                                                                                                 aCAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCCCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTc                                                                                                                >  1:595568/1‑249 (MQ=255)
                                                                                                                    aaaTAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTc                                                                                                                                           >  1:867116/1‑219 (MQ=255)
                                                                                                                      aTAAAGCGAGCTTGTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACtt                                                                                                                                                                             <  1:431891/183‑1 (MQ=255)
                                                                                                                         aaGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTaaaa                                                                                                      <  1:253638/251‑1 (MQ=255)
                                                                                                                                    ttCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATAc                                                                                                                                                                                                 >  1:87107/1‑149 (MQ=255)
                                                                                                                                     tCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACtt                                                                                                                                                                             <  1:648153/168‑1 (MQ=255)
                                                                                                                                       tAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGGCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATc                                                                                        <  1:277438/251‑1 (MQ=255)
                                                                                                                                             ctgctgctCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATc                                                                                                                                                                                                                      <  1:630580/119‑1 (MQ=255)
                                                                                                                                             ctgctgctCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCa                                                                                             >  1:473074/1‑240 (MQ=255)
                                                                                                                                                    tCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCg                                                                           <  1:859939/251‑1 (MQ=255)
                                                                                                                                                      cGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATc                                                                                        >  1:889129/1‑236 (MQ=255)
                                                                                                                                                              ccGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAg                                                                 <  1:500328/251‑1 (MQ=255)
                                                                                                                                                                gTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAgtcgtc                                                                                                                                                          <  1:685162/160‑1 (MQ=255)
                                                                                                                                                                gTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCttt                                                                                                                                                       <  1:526093/163‑1 (MQ=255)
                                                                                                                                                                gTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCatat                                                                                                                                   >  1:569025/1‑183 (MQ=255)
                                                                                                                                                                gTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTcc                                                                                                               >  1:863881/1‑203 (MQ=255)
                                                                                                                                                                 tCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCaa                                                              <  1:716382/251‑1 (MQ=255)
                                                                                                                                                                    aaaaaacgaactttttctgTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACt                                                            <  1:723304/232‑1 (MQ=255)
                                                                                                                                                                            gtgtAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCt                                                                                                                                                                                                                     <  1:152055/89‑1 (MQ=255)
                                                                                                                                                                            gtgtAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGAt                                                                                                                                                                 <  1:264357/141‑1 (MQ=255)
                                                                                                                                                                            gtgtAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCataat                                                                                                                      >  1:131669/1‑184 (MQ=255)
                                                                                                                                                                            gtgtAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGAt                                                                                  >  1:624756/1‑220 (MQ=255)
                                                                                                                                                                            gtgtAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAAc                                                     >  1:69249/1‑249 (MQ=255)
                                                                                                                                                                            gtgtAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAACAt                                                   >  1:284637/1‑251 (MQ=255)
                                                                                                                                                                                 aTCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAACATAAata                                              <  1:94911/251‑1 (MQ=255)
                                                                                                                                                                                           aTTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAACATAAATATGCTAATAAg                                    <  1:587518/251‑1 (MQ=255)
                                                                                                                                                                                            ttttAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGc                                                                                                                             <  1:465852/161‑1 (MQ=255)
                                                                                                                                                                                                  gTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACt                                                                                                                                                                              >  1:765036/1‑106 (MQ=255)
                                                                                                                                                                                                  gTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAACATAAATATGCTAATAAGATTAAg                              >  1:752043/1‑250 (MQ=255)
                                                                                                                                                                                                             tctcCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGc                                                                                                                             <  1:415180/144‑1 (MQ=255)
                                                                                                                                                                                                              ctcCAGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGa                                                                                                                                              <  1:179057/126‑1 (MQ=255)
                                                                                                                                                                                                                  aGGTTAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAACATAAATATGCTAATAAGATTAAGCATATaaa                      <  1:654542/242‑1 (MQ=255)
                                                                                                                                                                                                                      tAGCTAACACTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGacaac                                                                      >  1:734837/1‑190 (MQ=255)
                                                                                                                                                                                                                             cacTTCTTCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGCTAAAACCGACAACAATAGCAACTTATTAACATAAATATGCTAATAAGATTAAGCATATAAAAACAAATATGTTTTTATGCg  >  1:441258/1‑251 (MQ=255)
                                                                                                                                                                                                                               cttcttCATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCaa                                                              >  1:779827/1‑189 (MQ=255)
                                                                                                                                                                                                                                ttcttcATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAAc                                                     <  1:651000/197‑1 (MQ=255)
                                                                                                                                                                                                                                    tcATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAgt                                                                                                                                                              >  1:725863/1‑88 (MQ=255)
                                                                                                                                                                                                                                    tcATTAGATTTAACTTTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAAc                                                     >  1:298682/1‑193 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                      
ATAGATATGAAATCGACCATCATTATAAGCGGTTGCTACATAGGATAGTTTTTGGGTCAGTTCTCTAATTTCCTGGTAAAAACGAAAAGAAATTTCCTTGCTTTGACTATCATACAAAATAAAGCGAGCTTTTTCTAAAAGCTGCTGCTCCGCTTCTTCCGTCCAAACCACGGTGTAATCCAGTTTCATTTTAAGTCCAATACTTTCTCCAGGTTAGCTAACACTTCTTCATTGGATTTAATTCTAATTTCTCCGTTATCTAACCGAGCAAAAAACAATACTTCTTCGGAAAGTGTCACTTTCTGCGGTAGATAGTCGTCTTTGCGGTAGGATTCTTGCATATTTAGGCTCATAATAATTTCCTCGCTAAAAAGTTAGTCATAATCATAGATAAAACCGACAACAATAGCAACTTATTAACATAAATATGCTAATAAGATTAAGCATATAAAAACAAATATGTTTTTATGCG  >  1/779077‑779548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑