Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 668,636 T→C intergenic (+50279/‑27947) unknown → / → unknown tRNA‑Arg‑ACG/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1668,6360TC100.0% 287.8 / NA 84intergenic (+50279/‑27947)unknown/unknowntRNA‑Arg‑ACG/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/48);  total (36/48)

AAAATGCTCTAATCTACAATCGCCAGAGTTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGTTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCTTATTAAAGGTCAAGCGA  >  1/668407‑668880
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
aaaaTGCTCTAATCTACAATCGCCAGAGTTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTgccgc                                                                                                                                                                                                                                  >  1:417583/1‑250 (MQ=255)
      ctctAATCTACAATCGCCAGAGTTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGAt                                                                                                                                                                                                                           <  1:399383/251‑1 (MQ=255)
      ctctAATCTACAATCGCCAGAGTTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGAt                                                                                                                                                                                                                           <  1:23627/251‑1 (MQ=255)
       tctAATCTACAATCGCCAGAGTTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGAtt                                                                                                                                                                                                                          <  1:652063/251‑1 (MQ=255)
          aaTCTACAATCGCCAGAGTTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGAt                                                                                                                                                                                                                           >  1:254352/1‑247 (MQ=255)
          aaTCTACAATCGCCAGAGTTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATtgtg                                                                                                                                                                                                                       >  1:494114/1‑251 (MQ=255)
                   tCGCCAGAGTTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGc                                                                                                                                                                                                              <  1:380631/251‑1 (MQ=255)
                            ttAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTACGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACAt                                                                                                                                                                                                     <  1:250189/251‑1 (MQ=255)
                                                gATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTAc                                                                                                                                                                                                       <  1:599331/229‑1 (MQ=255)
                                                 aTTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGAt                                                                                                                                                                                                                           >  1:68134/1‑208 (MQ=255)
                                                 aTTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGc                                                                                                                                                                                                              <  1:341739/221‑1 (MQ=255)
                                                 aTTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATa                                                                                                                                                                                >  1:366088/1‑251 (MQ=255)
                                                    tCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATCAGt                                                                                                                                                                             <  1:267585/251‑1 (MQ=255)
                                                    tCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGt                                                                                                                                                                             <  1:73096/251‑1 (MQ=255)
                                                         gggTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGAt                                                                                                                                                                                                                           <  1:700745/200‑1 (MQ=255)
                                                         gggTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTAt                                                                                                                                                                                       <  1:697901/236‑1 (MQ=255)
                                                                     gAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGatata                                                                                                                                                             <  1:611268/250‑1 (MQ=255)
                                                                       aTGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGat                                                                                                                                                                >  1:9578/1‑245 (MQ=255)
                                                                        tGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGAt                                                                                                                                                         <  1:341208/251‑1 (MQ=255)
                                                                         gTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTAc                                                                                                                                                                                                                   >  1:275427/1‑192 (MQ=255)
                                                                                gTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTAc                                                                                                                                                                                                                   >  1:228946/1‑185 (MQ=255)
                                                                                gTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGAc                                                                                                                                                                       <  1:339304/229‑1 (MQ=255)
                                                                                gTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGatata                                                                                                                                                             >  1:697876/1‑239 (MQ=255)
                                                                                gTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTtagatag                                                                                                                                                 >  1:629132/1‑251 (MQ=255)
                                                                                 tttATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTtagataga                                                                                                                                                >  1:646505/1‑251 (MQ=255)
                                                                                   tattaACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGAt                                                                                                                                                                                                                           <  1:857901/174‑1 (MQ=255)
                                                                                   tattaACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTg                                                                                                                                                                                               >  1:26933/1‑202 (MQ=255)
                                                                                   tattaACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGa                                                                                                                                                          >  1:510887/1‑239 (MQ=255)
                                                                                    attaACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTATGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAggg                                                                                                                                             <  1:444956/251‑1 (MQ=255)
                                                                                                    gAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCa                                                                                                                              >  1:174822/1‑250 (MQ=255)
                                                                                                              aaTTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTa                                                                                                                   <  1:72406/251‑1 (MQ=255)
                                                                                                                  aCATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACag                                                                                                                                                                                                                 >  1:191534/1‑153 (MQ=255)
                                                                                                                   cATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAg                                                                                                              >  1:534033/1‑251 (MQ=255)
                                                                                                                       aGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTAc                                                                                                                                                                                                                   >  1:882857/1‑146 (MQ=255)
                                                                                                                       aGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTgg                                                                                                                                                                           <  1:246444/186‑1 (MQ=255)
                                                                                                                       aGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATg                                                                                                                                                           <  1:395594/202‑1 (MQ=255)
                                                                                                                       aGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTtagat                                                                                                                                                   <  1:221205/210‑1 (MQ=255)
                                                                                                                       aGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAAc                                                                                                                                      >  1:640360/1‑223 (MQ=255)
                                                                                                                       aGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAg                                                                                                              >  1:422054/1‑247 (MQ=255)
                                                                                                                       aGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGatat                                                                                                          >  1:50083/1‑251 (MQ=255)
                                                                                                                        gATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGAt                                                                                                                                                                                 >  1:204914/1‑179 (MQ=255)
                                                                                                                         atatTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTa                                                                                                        >  1:565024/1‑251 (MQ=255)
                                                                                                                         atatTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTa                                                                                                        >  1:508514/1‑251 (MQ=255)
                                                                                                                            ttatCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAggg                                                                                                     <  1:857754/251‑1 (MQ=255)
                                                                                                                              atCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCg                                                                                                   <  1:39529/251‑1 (MQ=255)
                                                                                                                                   gCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTtagat                                                                                                                                                   >  1:168737/1‑198 (MQ=255)
                                                                                                                                   gCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTAt                                                                                               >  1:406148/1‑250 (MQ=255)
                                                                                                                                    cATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATc                                                                                              <  1:772198/250‑1 (MQ=255)
                                                                                                                                      tAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTgg                                                                                                                                                                           >  1:816379/1‑171 (MQ=255)
                                                                                                                                      tAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTtagat                                                                                                                                                   >  1:53919/1‑195 (MQ=255)
                                                                                                                                      tAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCg                                                                                                   >  1:422518/1‑243 (MQ=255)
                                                                                                                                        aTTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATg                                                                                                                                                           <  1:781280/185‑1 (MQ=255)
                                                                                                                                        aTTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGc                                                                                                                          >  1:848514/1‑218 (MQ=255)
                                                                                                                                        aTTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAggg                                                                                                     >  1:106534/1‑239 (MQ=255)
                                                                                                                                        aTTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTa                                                                                         >  1:490475/1‑251 (MQ=255)
                                                                                                                                           cATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATc                                                                                      <  1:202992/251‑1 (MQ=255)
                                                                                                                                               ggTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACAttt                                                                                                                                                                                                   <  1:59361/138‑1 (MQ=255)
                                                                                                                                               ggTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGa                                                                                                                                                          <  1:547024/179‑1 (MQ=255)
                                                                                                                                                       caacGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACt                                                                          <  1:53761/251‑1 (MQ=255)
                                                                                                                                                        aacGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACtt                                                                         <  1:561567/251‑1 (MQ=255)
                                                                                                                                                         acGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACt                                                                                                                                                                      <  1:172745/157‑1 (MQ=255)
                                                                                                                                                         acGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGata                                                                                                                                                               <  1:485720/164‑1 (MQ=255)
                                                                                                                                                         acGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATg                                                                                                                                                           <  1:864382/168‑1 (MQ=255)
                                                                                                                                                                             tATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTc                                                    <  1:167495/251‑1 (MQ=255)
                                                                                                                                                                             tATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTc                                                    <  1:686532/251‑1 (MQ=255)
                                                                                                                                                                             tATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTc                                                    <  1:893862/251‑1 (MQ=255)
                                                                                                                                                                                        aTCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTtagat                                                                                                                                                   <  1:409992/145‑1 (MQ=255)
                                                                                                                                                                                        aTCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTg                                             <  1:231133/247‑1 (MQ=255)
                                                                                                                                                                                        aTCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGAc                                         <  1:37871/251‑1 (MQ=255)
                                                                                                                                                                                                      gAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACtt                                                                         <  1:413994/205‑1 (MQ=255)
                                                                                                                                                                                                      gAACACCGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGaa                           >  1:187303/1‑251 (MQ=255)
                                                                                                                                                                                                           ccGCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCa                       >  1:543946/1‑250 (MQ=255)
                                                                                                                                                                                                             gCTTTACCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGAc                                         <  1:828840/230‑1 (MQ=255)
                                                                                                                                                                                                                  aCCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTGTCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCttatt               >  1:449529/1‑251 (MQ=255)
                                                                                                                                                                                                                  aCCTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCttatt               >  1:764550/1‑251 (MQ=255)
                                                                                                                                                                                                                   ccTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCttatta              <  1:314749/251‑1 (MQ=255)
                                                                                                                                                                                                                   ccTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCttatta              <  1:822142/251‑1 (MQ=255)
                                                                                                                                                                                                                   ccTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTAGTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCttatta              <  1:446734/251‑1 (MQ=255)
                                                                                                                                                                                                                    cTCAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCTTATTaa             <  1:319279/251‑1 (MQ=255)
                                                                                                                                                                                                                      cAATGAAAGCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTAt                                                                                               <  1:461631/167‑1 (MQ=255)
                                                                                                                                                                                                                              gCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTc                                                    <  1:286413/202‑1 (MQ=255)
                                                                                                                                                                                                                              gCATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCt                   <  1:514702/235‑1 (MQ=255)
                                                                                                                                                                                                                               cATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCTTATTAAAGGTCAAGCGa  >  1:860435/1‑251 (MQ=255)
                                                                                                                                                                                                                               cATCAGCTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCAACCTTATTAAAGGTCAAGCGa  <  1:11421/251‑1 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
AAAATGCTCTAATCTACAATCGCCAGAGTTAGCGACAAAAATTCATACGATTTCAGGGGGTAATTTAGGGAATGTACATCGTTTATTAACCGCGTGCGAGGAACAGAGCAAATTACATTAGATATTATCGAGCATAATTCATGGGTACAACCAACGCAGGGCTTACGAAAAATTATCGGATAAAATCAAGGATTATTCGAACACCGCTTTACCTCAATGAAAGCATCAGTTCGTGGCTCATTCGTGCCGCCTTAGATTGTGGTACAGAGCCGATTACATTTACTGGATTTTATTGGGATAAGTGGCGACTATGGATATATGATTTAGATAGAGGGTTTGAACCGATTGCACCGCAGATTTATGAAGATATTAGGGCGTTATCGTTTAATCAACAGGTAAACTTAGTCAACCATTCGCTTTATTCCGTATTGAGACCGATTAATGGCGAAAGCACCCTTATTAAAGGTCAAGCGA  >  1/668407‑668880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑