| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 660,864 | T→C | intergenic (+42507/‑35719) | unknown → / → unknown | tRNA‑Arg‑ACG/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 660,864 | 0 | T | C | 100.0% | 295.3 / NA | 87 | intergenic (+42507/‑35719) | unknown/unknown | tRNA‑Arg‑ACG/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (25/62); total (25/62) | |||||||||||
TGATTGGTTATGACGGACGTAAAAATTCCGATGTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCTCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTGAGCAAAACCTTGACAAAAGCGGGTTTGCCTCAAC > 1/660619‑661101 | tGATTGGTTATGACGGACGTAAAAATTCCGATGTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCa > 1:334428/1‑251 (MQ=255) gTTATGACGGACGTAAAAATTCCGATGTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATaaa > 1:818007/1‑251 (MQ=255) gTTATGACGGACGTAAAAATTCCGATGTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAAGCGTTTCCCCGGCAGATaaa > 1:793263/1‑251 (MQ=255) gTTATGACGGACGTAAAAATTCCGATGTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAAACGTTTCCCCGGCAGATaaa > 1:106231/1‑251 (MQ=255) ccGATGTATTTGCGCGTGATCCCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGAt < 1:226590/251‑1 (MQ=255) aTGTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATaa < 1:289817/250‑1 (MQ=255) aTGTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCCAATTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGGGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGCGGATAAACCGGTTCCCCGGCAGATAAACAAATCGCCGCACCTATTGCTaaa > 1:107118/1‑251 (MQ=255) gTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGt > 1:596355/1‑251 (MQ=255) gTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAAACGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATaaaag > 1:7090/1‑249 (MQ=255) cgAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAgg < 1:759035/251‑1 (MQ=255) cgAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAgg < 1:628050/251‑1 (MQ=255) aaaTCATGGCAGGCGCGGGCATTAAAGCCTATTTATTCCCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGa < 1:823478/250‑1 (MQ=255) aaaTCATGGCAGGCGCGGGCATTAAAGCCTATTTATTCCCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGAt < 1:410056/251‑1 (MQ=255) aaTCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGAtt > 1:594503/1‑251 (MQ=255) tCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGGGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTa > 1:578311/1‑251 (MQ=255) cATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCAc < 1:406970/212‑1 (MQ=255) cATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGAt < 1:589641/250‑1 (MQ=255) gCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCAc > 1:632424/1‑190 (MQ=255) atttattGCCGCGAAAATTGCAAACGCCGATATTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGAt < 1:674453/239‑1 (MQ=255) atttattACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGAt < 1:5245/194‑1 (MQ=255) atttattACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTa > 1:18512/1‑251 (MQ=255) aattcccGCGCAAATTGCCAAGGCGGGTGTTGCCCTATGCCATTCAATATTTCGACACCGCCGCCGGCGTGATGGTCACCGCCAGCCATAGCCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAgac < 1:12515/246‑1 (MQ=255) cAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGa > 1:392487/1‑207 (MQ=255) cAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGacac < 1:685320/246‑1 (MQ=255) cAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCgtgg < 1:625517/251‑1 (MQ=255) aTTGCCAACGCCGGTGTTGGCCTATGCCATTAAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGtggtgg < 1:860764/251‑1 (MQ=255) ttGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAgac > 1:254402/1‑237 (MQ=255) ccGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTatat < 1:557124/251‑1 (MQ=255) cGGTGTTGGCCTATGCAATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATc < 1:521466/251‑1 (MQ=255) gtgtTGGCCTATGCCATTCAATATTTCGACCCCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCCCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAgacg < 1:316568/226‑1 (MQ=255) gtgtTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAgac < 1:476739/225‑1 (MQ=255) gtgtTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCg > 1:708481/1‑250 (MQ=255) ggCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGAt < 1:410596/160‑1 (MQ=255) ggCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGa < 1:149410/186‑1 (MQ=255) catATGCCATCCAATATTACGACACCGCCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAAc < 1:298270/248‑1 (MQ=255) cATTCAATATTTCGACACCCCCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCAc < 1:92533/251‑1 (MQ=255) atatTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCa > 1:124945/1‑251 (MQ=255) ccgccgGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACg < 1:551927/251‑1 (MQ=255) tGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAAc < 1:498918/251‑1 (MQ=255) tGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAAc < 1:794873/251‑1 (MQ=255) gTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAgac < 1:230070/177‑1 (MQ=255) ccagccaTAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATAc < 1:18645/250‑1 (MQ=255) ccagccaTAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATAc < 1:705355/250‑1 (MQ=255) ccagccaTAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATAc < 1:708056/250‑1 (MQ=255) ccagccaTAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATAc < 1:307217/250‑1 (MQ=255) ccagccaTAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATAc < 1:622176/250‑1 (MQ=255) ccagccaTAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATAc < 1:154732/250‑1 (MQ=255) gccaTAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGCTAAAGTCGCTGCCGGCAGAATTTAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCCCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGACATTAACTATGTTTATACcgc > 1:563471/1‑250 (MQ=255) gccaTAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGAt < 1:810/152‑1 (MQ=255) gccaTAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAgac < 1:703923/167‑1 (MQ=255) ccgccgGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACgg < 1:524913/251‑1 (MQ=255) cgccgGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGgt < 1:756762/251‑1 (MQ=255) ccgGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCaaa < 1:394168/204‑1 (MQ=255) ccgGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGgtgt < 1:568594/251‑1 (MQ=255) ggAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTgg > 1:216494/1‑251 (MQ=255) gAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTgg < 1:720225/250‑1 (MQ=255) gAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGCCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCAc > 1:509072/1‑243 (MQ=255) aaGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTggg < 1:230798/250‑1 (MQ=255) aaGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGt < 1:163799/251‑1 (MQ=255) aGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGgtgt < 1:508451/146‑1 (MQ=255) gATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGcc < 1:410679/168‑1 (MQ=255) aTAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGtt < 1:415035/249‑1 (MQ=255) aTAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGtt < 1:224255/249‑1 (MQ=255) aTAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGtt < 1:503462/249‑1 (MQ=255) aTAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTa < 1:320519/250‑1 (MQ=255) cGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCAc > 1:122640/1‑235 (MQ=255) gTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGAtt < 1:812965/129‑1 (MQ=255) gTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAgac > 1:627629/1‑143 (MQ=255) gTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTggg < 1:534946/241‑1 (MQ=255) gTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAgtg > 1:344293/1‑251 (MQ=255) ttATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGAGAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAgtgt < 1:429766/251‑1 (MQ=255) ataAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTg < 1:647712/251‑1 (MQ=255) gtgtATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGAt < 1:36896/75‑1 (MQ=255) tgtATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTGAGCaa < 1:322801/250‑1 (MQ=255) gtATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATACAGTCGCTGCCGGCAGCATTAAGGATTTACCGAGCAGTCAGGATTATGCGGCGTTAgac > 1:129470/1‑133 (MQ=255) gtATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGtt < 1:454600/233‑1 (MQ=255) tATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTGAGCAAAAc < 1:365155/251‑1 (MQ=255) tATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTGAGCAAAAc < 1:292498/251‑1 (MQ=255) tAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTAt > 1:39809/1‑230 (MQ=255) aGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGa < 1:808620/231‑1 (MQ=255) ggCAAAGCCAACGGCGGTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATAc < 1:719805/206‑1 (MQ=255) gcggTGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATAc > 1:681013/1‑193 (MQ=255) tGGACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTGAGCAAAACCTTGACAAAAGCGGGTTTGCCt < 1:288564/250‑1 (MQ=255) ggACAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTGAGCAAAACCTTGACAAAAGCGGGTTTGCCTCa > 1:783941/1‑251 (MQ=255) aCAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTGAGCAAAACCTTGACAAAAGCGGGTTTGCCTCAAc < 1:525736/251‑1 (MQ=255) aCAAATCGTTTCCCCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTGAGCAAAACCTTGACAAAAGCGGGTTTGCCTCAAc < 1:8261/251‑1 (MQ=255) aaTCGTTTCCCCGGCAGATAAACAAATCGCCGCAc < 1:307787/35‑1 (MQ=255) | TGATTGGTTATGACGGACGTAAAAATTCCGATGTATTTGCGCGTGATACCGCCGAAATCATGGCAGGCGCGGGCATTAAAGCCTATTTATTACCGCGCAAATTGCCAACGCCGGTGTTGGCCTATGCCATTCAATATTTCGACACCACCGCCGGCGTGATGGTCACCGCCAGCCATAACCCGCCGGAAGATAACGGTTATAAAGTGTATTTAGGCAAAGCCAACGGCGGTGGACAAATCGTTTCCTCGGCAGATAAACAAATCGCCGCACTTATTGATAAAGTCGCTGCCGGCAGTATTAAGGATTTACCGCGCAGTCAGGATTATGCGGTGTTAGACGACACCGTGGTGGATGCCTATATCGCCAAAACCGCTTCACTTGCCAAAGAACCGCAAACGGATATTAACTATGTTTATACCGCGATGCACGGTGTGGGTTATGAAGTGTTGAGCAAAACCTTGACAAAAGCGGGTTTGCCTCAAC > 1/660619‑661101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |