| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | 1 | 696418–701896 | 702018–701900 | 5–5601 | 25 [18] | [22] 24 | unknown–unknown | unknown,unknown,unknown,unknown |
GGAAGTAAGAAGGGAAAGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTC > 1/701918‑702268 | ggaaGTAAGAAGGGAAAGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAg > 1:291507/1‑251 (MQ=31) gaaGTAAGAAGGGAAAGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGAGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAg > 1:455386/1‑250 (MQ=14) aagaagGGAAAGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGAc < 1:718081/251‑1 (MQ=32) aagaagGGAAAGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGAc < 1:506630/251‑1 (MQ=32) aaaGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGtat < 1:64173/250‑1 (MQ=35) aaaGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGtat < 1:310331/250‑1 (MQ=35) aaCGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGc < 1:658941/249‑1 (MQ=37) aaCGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGc < 1:215043/249‑1 (MQ=37) aaCGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGAGAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTc < 1:437185/251‑1 (MQ=38) gagaAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAgaga > 1:874561/1‑251 (MQ=40) gAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAAc > 1:596511/1‑222 (MQ=34) gAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAAt < 1:861181/244‑1 (MQ=255) aaagcgaaagcgCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTAc < 1:862751/251‑1 (MQ=255) cagagagaGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGa > 1:126365/3‑251 (MQ=255) ggAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTc < 1:639473/206‑1 (MQ=40) agagGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATGCCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGataata < 1:190116/212‑1 (MQ=255) agagGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGAc > 1:648124/1‑190 (MQ=33) ggATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTAc < 1:356047/226‑1 (MQ=255) gAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAgaga < 1:554253/190‑1 (MQ=255) atatTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGt < 1:604548/251‑1 (MQ=255) gcggcgATAGTGCGGTGGTACCACCTGAAACCATGCCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGAc < 1:131053/250‑1 (MQ=255) aTAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGtat < 1:546963/166‑1 (MQ=39) gTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTaa < 1:393878/246‑1 (MQ=255) gTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTc > 1:793347/1‑250 (MQ=255) | GGAAGTAAGAAGGGAAAGAACGAGAGAAGCGAAGAGCGGAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTTATAGCTAGACAACGTATAGCTCAGAGATAATAAATTCAGACACAGGTACTTTATTATGAACTTGGATTGTAAATTCAAGCCCATAAAAGTAAGACATTAAATTC > 1/701918‑702268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |