Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,003,146	+CT	intergenic (‑12/+49789)	unknown ← / ← unknown	tRNA‑Lys‑TTT/tRNA‑Lys‑TTT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,003,145	1	.	T	100.0%	145.1 / NA	43	intergenic (‑11/+49790)	unknown/unknown	tRNA‑Lys‑TTT/tRNA‑Lys‑TTT
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base T (27/16);  total (27/16)
*	1	1,003,145	2	.	C	100.0%	149.9 / NA	43	intergenic (‑11/+49790)	unknown/unknown	tRNA‑Lys‑TTT/tRNA‑Lys‑TTT
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (27/16);  total (27/16)

CATTAGTGCTTTTGGCATAACCACCTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTT‑‑TTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTAACGTCACGTGGATACTGTCAGTATCTTACACAAATTTACTAGTTTGTAA  >  1/1002903‑1003370                                                                                                                                                                                                                                                    ||                                                                                                                                                                                                                                  caTTAGTGCTTTTGGCATAACCACCTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCAtttt‑‑tcttt                                                                                                                                                                                                                              <  1:161538/248‑5 (MQ=255)         cTTTTGGCATAACCACCTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACt                                                                                                                                                                                                                     <  1:884226/251‑1 (MQ=255)                cATAACCACCTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCTACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTtaat                                                                                                                                                                                                              <  1:549530/251‑1 (MQ=255)                cATAACCACCTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTtaat                                                                                                                                                                                                              <  1:541445/251‑1 (MQ=255)                cATAACCACCTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTtaat                                                                                                                                                                                                              <  1:406744/251‑1 (MQ=255)                  tAACCACCTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTtaataa                                                                                                                                                                                                            >  1:897382/1‑251 (MQ=255)                        ccTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTtaat                                                                                                                                                                                                              >  1:706658/1‑243 (MQ=255)                        ccTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAgg                                                                                                                                                                                                      >  1:647876/1‑251 (MQ=255)                              gTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGtattat                                                                                                                                                                                                >  1:690912/1‑251 (MQ=255)                                    gCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTAttatta                                                                                                                                                                                              <  1:421518/247‑1 (MQ=255)                                    gCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAAt                                                                                                                                                                                           <  1:250192/250‑1 (MQ=255)                                          gTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAAt                                                                                                                                                                                           <  1:321915/244‑1 (MQ=255)                                          gTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGcc                                                                                                                                                                                     >  1:584772/1‑250 (MQ=255)                                               aatGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTtaat                                                                                                                                                                                                              >  1:705864/1‑220 (MQ=255)                                                       gTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCAtttt‑‑tctttgg                                                                                                                                                                                                                            <  1:563138/196‑7 (MQ=255)                                                       gTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTg                                                                                                                                                                       >  1:45451/1‑251 (MQ=255)                                                          ttttAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGaa                                                                                                                                                                     >  1:835417/1‑250 (MQ=255)                                                            ttAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGaa                                                                                                                                                                     >  1:64810/1‑248 (MQ=255)                                                                    gtgGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTGACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCAtttt‑‑tctttgg                                                                                                                                                                                                                            <  1:585791/183‑7 (MQ=255)                                                                      ggTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTtaat                                                                                                                                                                                                              <  1:314197/197‑1 (MQ=255)                                                                                  tatTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGa                                                                                                                                            >  1:2993/1‑251 (MQ=255)                                                                                             cTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTAttatta                                                                                                                                                                                              <  1:235805/190‑1 (MQ=255)                                                                                             cTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATcc                                                                                                                                  >  1:623495/1‑250 (MQ=255)                                                                                                 aCAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTtgt                                                                                                                             >  1:325930/1‑251 (MQ=255)                                                                                                     aagaTTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGc                                                                                                                           <  1:410428/249‑1 (MQ=255)                                                                                                            aCGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTAttatta                                                                                                                                                                                              >  1:185950/1‑175 (MQ=255)                                                                                                            aCGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTa                                                                                                                  >  1:494483/1‑251 (MQ=255)                                                                                                            aCGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTa                                                                                                                  >  1:17315/1‑251 (MQ=255)                                                                                                             cGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAg                                                                                                                 >  1:66560/1‑251 (MQ=255)                                                                                                                 aaGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGaa                                                                                                             >  1:879011/1‑251 (MQ=255)                                                                                                                            aCTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGtt                                                                                                  >  1:708757/1‑251 (MQ=255)                                                                                                                            aCTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGtt                                                                                                  <  1:856735/251‑1 (MQ=255)                                                                                                                                tGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGAc                                                                                              <  1:601404/251‑1 (MQ=255)                                                                                                                                                                   gTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCATACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGAt                                                             >  1:543645/1‑249 (MQ=255)                                                                                                                                                                             aTTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTaa                                                  <  1:747983/250‑1 (MQ=255)                                                                                                                                                                             aTTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTaa                                                  <  1:188678/250‑1 (MQ=255)                                                                                                                                                                                                 gATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTaa                                                  <  1:31338/230‑1 (MQ=255)                                                                                                                                                                                                 gATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTAACGTCACGTGGATACTGTc                                >  1:500534/1‑248 (MQ=255)                                                                                                                                                                                                 gATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTAACGTCACGTGGATACTGTCAGt                             >  1:357005/1‑251 (MQ=255)                                                                                                                                                                                                              ctgctCTACCGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTAACGTCACGTGGATACTGTCAGTATCTTACACAAAt                >  1:112481/1‑251 (MQ=255)                                                                                                                                                                                                                       cGACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACg                                                                                                                      >  1:654805/1‑140 (MQ=255)                                                                                                                                                                                                                        gACTGAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTAACGTCACGTGGATACTGTCAGTATc                          >  1:18558/1‑231 (MQ=255)                                                                                                                                                                                                                            gAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGAc                                                                                              >  1:321717/1‑159 (MQ=255)                                                                                                                                                                                                                            gAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATc                                                            >  1:614091/1‑193 (MQ=255)                                                                                                                                                                                                                            gAGCTAACGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTAACGTCACGTGGATACTGTCAGTATCTTACACAAATTTACTAGTTTGTaa  >  1:328388/1‑251 (MQ=255)                                                                                                                                                                                                                                   cGACCCGTGTGCATTTTTCTTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTAcg                                                                                        <  1:850755/158‑1 (MQ=255)                                                                                                                                                                                                                                                    ||                                                                                                                                                                                                                                  CATTAGTGCTTTTGGCATAACCACCTTTGGTACAGGCGATTGTAATAATGTAAGGTTTTTTAGAAGTGTGGTTAATGCACATATTTTACTCACTTAACAGAAGATTAACGTTAAGGAGTATCGACTTTGGGCAACCGGTCCGGAGCTTTAACTTTTTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACTGAGCTAACGACCCGTGTGCATTTT‑‑TTTGGAGGGTAACTATTTAATAAGAAAGGTATTATTAAATGGTGCCCGAGGCCAGACTTGAACTGGCACGCCTCGAAAGGCGAGGGATTTTAAATCCCTTGTGCACACGATTAGTGAAAAGAAAGAGTTAGACCTTACGCGATGTACCCAGCCAATACATCCAGATCTATCCACTAACGTCACGTGGATACTGTCAGTATCTTACACAAATTTACTAGTTTGTAA  >  1/1002903‑1003370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑