Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,681,397 A→C intergenic (+38/‑392) unknown → / → unknown hypothetical protein/Permease of the drug/metabolite transporter (DMT) superfamily

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,681,3970AC100.0% 134.8 / NA 41intergenic (+38/‑392)unknown/unknownhypothetical protein/Permease of the drug/metabolite transporter (DMT) superfamily
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (23/18);  total (23/18)

AAACTCCGATATGGATTTTGAGAAAAATCCTTTATTTAGACCAACGGCAACATTAATTTGGTACAACCTAGATTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTAGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATGAAACCTATGCTAAAGAAGCAACGATTGAAAGCTATGAAAATCAACTAAAATCTGAATTACAGTCAGATCC  >  1/1681155‑1681641
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                    
aaaCTCCGATATGGATTTTGAGAAAAATCCTTTATTTAGACCAACGGCAACATTAATTTGGTACAACCTAGATTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCtat                                                                                                                                                                                                                                              <  1:441031/251‑1 (MQ=255)
        atatGGATTTTGAGAAAAATCCTTTATTTAGACCAACGGCAACATTAATTTGGTACAACCTAGATTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTc                                                                                                                                                                                                                                       <  1:119793/250‑1 (MQ=255)
        atatGGATTTTGAGAAAAATCCTTTATTTAGACCAACGGCAACATTAATTTGGTACAACCTAGATTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTc                                                                                                                                                                                                                                       <  1:879897/250‑1 (MQ=255)
                                            cGGCAACATTAATTTGGTACAACCTAGATTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAAcc                                                                                                                                                                                                   >  1:296151/1‑250 (MQ=255)
                                                       aTTTGGTACAACCTAGATTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTatat                                                                                                                                                                                                                                            >  1:307157/1‑198 (MQ=255)
                                                            gTACAACCTAGATTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGc                                                                                                                                                                                   <  1:891544/250‑1 (MQ=255)
                                                                 aCCTAGATTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCa                                                                                                                                                                             >  1:525125/1‑251 (MQ=255)
                                                                       aTTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTatat                                                                                                                                                                                                                                            >  1:181215/1‑182 (MQ=255)
                                                                       aTTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAatat                                                                                                                                                                         <  1:896178/249‑1 (MQ=255)
                                                                       aTTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAatat                                                                                                                                                                         <  1:404243/249‑1 (MQ=255)
                                                                          cAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAaac                                                                                                                                                                                                       <  1:132835/216‑1 (MQ=255)
                                                                            aaTGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTa                                                                                                                                                                  >  1:615027/1‑251 (MQ=255)
                                                                                        gCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAaac                                                                                                                                                                                                       >  1:853590/1‑202 (MQ=255)
                                                                                                   ttCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTatat                                                                                                                                                                                                                                            >  1:93530/1‑154 (MQ=255)
                                                                                                         aGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGaaaa                                                                                                                                         <  1:521316/247‑1 (MQ=255)
                                                                                                                 ttGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAAc                                                                                                                             <  1:446825/251‑1 (MQ=255)
                                                                                                                       gCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCaa                                                                                                                                                                                                          >  1:101018/1‑168 (MQ=255)
                                                                                                                         gTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTatat                                                                                                                                                                                                                                            >  1:617083/1‑132 (MQ=255)
                                                                                                                                          ggCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCaaaa                                                                                                    >  1:463638/1‑251 (MQ=255)
                                                                                                                                                  atGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAg                                                                                                                                                                                                                          >  1:85238/1‑125 (MQ=255)
                                                                                                                                                  atGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAAc                                                                                                                                                    <  1:492129/195‑1 (MQ=255)
                                                                                                                                                  atGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGa                                                                                            >  1:340796/1‑251 (MQ=255)
                                                                                                                                                          gTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAg                                                                                                                                                                                                                          >  1:637017/1‑117 (MQ=255)
                                                                                                                                                          gTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAatat                                                                                                                                                                         >  1:128852/1‑166 (MQ=255)
                                                                                                                                                          gTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGt                                                                                                                                                          <  1:308810/181‑1 (MQ=255)
                                                                                                                                                          gTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCtt                                                                                    >  1:690727/1‑251 (MQ=255)
                                                                                                                                                           ttttAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCtt                                                                                    >  1:306423/1‑250 (MQ=255)
                                                                                                                                                            tttAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCa                                                                                  >  1:231468/1‑251 (MQ=255)
                                                                                                                                                                     tGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGatat                                                                         <  1:459405/251‑1 (MQ=255)
                                                                                                                                                                      gCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATg                                                                        >  1:688155/1‑251 (MQ=255)
                                                                                                                                                                      gCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATg                                                                        >  1:778770/1‑251 (MQ=255)
                                                                                                                                                                       cATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATGa                                                                       >  1:253707/1‑251 (MQ=255)
                                                                                                                                                                             gagTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATg                                                                                                                                                                                             <  1:507030/127‑1 (MQ=255)
                                                                                                                                                                                            aatctgaaaGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAAc                                                                                                                             <  1:469634/176‑1 (MQ=255)
                                                                                                                                                                                                             aTTTACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCAtt                                                                                                                                                                                <  1:660759/108‑1 (MQ=255)
                                                                                                                                                                                                                tACACCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATGAAACCTATGCTAAAGAAGCAACGATTGAAAGCTATGAAAATc                              <  1:529996/251‑1 (MQ=255)
                                                                                                                                                                                                                  cacCTGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATGAAACCTATGc                                                              >  1:517159/1‑217 (MQ=255)
                                                                                                                                                                                                                      tGAACAAATAGAAGAAAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATGAAACCTATGCTAAAGAAGCAACGATTGAAAGCTATGAAAATCAACTaa                        >  1:679344/1‑251 (MQ=255)
                                                                                                                                                                                                                                   gaaAATGACCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACAt                                                                                                                                                  >  1:263524/1‑116 (MQ=255)
                                                                                                                                                                                                                                          aCCTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATGAAACCTATGCTAAAGAAGCAACGATTGAAAGCTATGAAAATCAACTAAAATCTGAATTACAGTCAGAt    <  1:461472/251‑1 (MQ=255)
                                                                                                                                                                                                                                            cTCGGTCGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATGAAACCTATGCTAAAGAAGCAACGATTGAAAGCTATGAAAATCAACTAAAATCTGAATTACAGTCAGATcc  <  1:47652/251‑1 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                    
AAACTCCGATATGGATTTTGAGAAAAATCCTTTATTTAGACCAACGGCAACATTAATTTGGTACAACCTAGATTCAAATGAATTGGTTGCAATTGGTGATTCAAAAGCCAGAATTGATGGCGTGAATTACAATGATGAGGCTAAATATGTAGATGTTTTAAATAGTGCATTAAGAGTAAAAATTCTGAAATCTGAAAGATCTTAAATTTACACCTGAACAAATAGAAGAAAATGACCTCGGTAGTTTCTATATTATTCCATTATTACAAAGACAATCAGAATTTCAAAACAACCCAAATGCGCCAAAAGCATTTCAATATTGGGCTATCGATGGTTTTAACATCTCTGAAAATGAACTAAAAACTTGGAAGTTTGATAAAAAACCAAAAGTAATTGAATTATCTTCAGATGGATATGAAACCTATGCTAAAGAAGCAACGATTGAAAGCTATGAAAATCAACTAAAATCTGAATTACAGTCAGATCC  >  1/1681155‑1681641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑