| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 224,559 | T→C | L754L (CTT→CTC) | unknown → | DNA‑directed RNA polymerase beta subunit (EC 2.7.7.6) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 224,559 | 0 | T | C | 100.0% | 242.4 / NA | 70 | L754L (CTT→CTC) | unknown | DNA‑directed RNA polymerase beta subunit (EC 2.7.7.6) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (29/41); total (29/41) | |||||||||||
CATGACGATGCGAACCGTGCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTTATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTCAACAAGATCGCTTCACCACGATTCACATCCAAGA > 1/224317‑224804 | cATGACGATGCGAACCGTGCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAata < 1:326972/251‑1 (MQ=255)cATGACGATGCGAACCGTGCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTC‑GTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAata < 1:79134/250‑1 (MQ=255) aCGATGCGAACCGTGCTTTGATGGGGGCGAACATGCAGCGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATAcc < 1:361970/251‑1 (MQ=255) aCGATGCGAACCGTGCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAGAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATAcc < 1:177281/251‑1 (MQ=255) aCGATGCGAACCGTGCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATAcc < 1:396069/251‑1 (MQ=255) aCGATGCGAACCGTGCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATAcc < 1:287783/251‑1 (MQ=255) gATGCGAACCGTGCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAAAGCGGCGGGACCATCCCATATGTGGATGCTTCCCGCCTCGTGGGGGAAGGCAATGAAGAAGAAAATGGCGCGGGGGGAGCCGGGGTTGGTATTTATAAAATCATTAAATATACCCg > 1:515215/1‑251 (MQ=255) ccGTGCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AAcc < 1:725936/251‑1 (MQ=255) gCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGGAAAAAGCGGCGGGACCATCCAAAATGTGGGTGGTTCCCGCCTCGTGGGGGAAGGCAAAGAAAAAGAAAATGTCGCGGGGGAAGGCGGGATTGATATTTATAAACTCATTAAAAATAACCCTTCG‑AACCaaaa > 1:96009/1‑251 (MQ=255) cTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGGAAAAAGCGGCGGGACCATCCCAAATGTGGGTGGTTCCCCCCTCGGGGGGGAAGGCAATGAAGACGAAAATGTCGCGGGGGGAGCCGGGGTTGGTATTTTTTAACTCCTTAAATATAACCGCTCG‑AACCaaaaa > 1:172568/1‑250 (MQ=255) cTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAAt < 1:587268/251‑1 (MQ=255) gggCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTAt < 1:587853/250‑1 (MQ=255) aTGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGGAAAAAGCGGCGGGACCATCCAAAATGTGGATGTTTCCCGCCTCGTGGGGAAAGACAATGAAAAAGAAAAAGTCGCGGGCGGAGCCGGGATTGATATTTTTAAAATCATTAAAAATACCCCCTCG‑AACCAAAAAAACTGTATCAACCaaaa > 1:735946/1‑250 (MQ=255) cGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGGAAAACGCGGCGGGACCATCCCAAATGTGGGTGCTTCCCGCCTCCTGGGGGAAGTCAAAGAAGACGAAACTGTCGCGGGCGGAGCCGGGATTGATATTTTTAAACTCCTTTAATATACCCCTTCGAAACCAAAAAACC‑GTATTAACCCAAATCCttt > 1:200141/1‑250 (MQ=255) aaGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTtgtgtg < 1:198/251‑1 (MQ=255) cGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATATCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAAc < 1:290374/251‑1 (MQ=255) cGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAAc < 1:553312/251‑1 (MQ=255) tGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAAAGCGGCGGGACCATCCAATATTTGGATGCTTCCCCCCCCGTGGGGAAAATCAAAGAAAACGAAGCTGTCGCGGGGGGAGCCGGGATTGATATTTTTAAACTCATTAAAAATACCCCTTCG‑AACCAAAAAAACCGTATCAACCAAAATCCTTTTGTGGaaatg > 1:89345/1‑248 (MQ=255) cGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGc < 1:15059/251‑1 (MQ=255) gcgtgcgGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAAc < 1:163694/239‑1 (MQ=255) gTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AAcc < 1:300284/180‑1 (MQ=255) tACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAg < 1:324361/251‑1 (MQ=255) aTCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTcc < 1:635989/251‑1 (MQ=255) cGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATAcc < 1:867435/152‑1 (MQ=255) cccTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAgg < 1:553598/250‑1 (MQ=255) ccGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTAt < 1:322917/160‑1 (MQ=255) gtgGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTgg > 1:59791/1‑193 (MQ=255) ttGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAAc < 1:794970/251‑1 (MQ=255) tgtgGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACa > 1:584013/1‑251 (MQ=255) gTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCAc > 1:881177/1‑202 (MQ=255) gTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGt > 1:46563/1‑212 (MQ=255) aTCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAAc < 1:377655/148‑1 (MQ=255) aTCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGA‑ATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTAt < 1:840457/124‑1 (MQ=255) tCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTgg > 1:47377/1‑251 (MQ=255) atatGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAAc > 1:872582/1‑143 (MQ=255) atatGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCAcc < 1:782610/193‑1 (MQ=255) atatGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACg > 1:60257/1‑251 (MQ=255) atatGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACg > 1:280575/1‑251 (MQ=255) atGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAgg > 1:812181/1‑199 (MQ=255) tgtgGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGtt > 1:104189/1‑251 (MQ=255) aTGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCAc > 1:220831/1‑184 (MQ=255) aTGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAAc < 1:356034/251‑1 (MQ=255) aTGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAAc < 1:487827/251‑1 (MQ=255) aTGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAAc < 1:619759/251‑1 (MQ=255) aTGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAAc < 1:806017/251‑1 (MQ=255) cTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTc > 1:13979/1‑120 (MQ=255) cTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAAc < 1:713750/132‑1 (MQ=255) cTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAAc < 1:316780/248‑1 (MQ=255) ttCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACtt < 1:622826/249‑1 (MQ=255) cATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGAc < 1:62352/250‑1 (MQ=255) tggtgAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATg > 1:761434/1‑251 (MQ=255) gtgAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGtt > 1:602970/1‑251 (MQ=255) gtgAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGtt > 1:822355/1‑251 (MQ=255) tgAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGtt < 1:831237/250‑1 (MQ=255) aaGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGtc < 1:378801/251‑1 (MQ=255) tCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGtctc > 1:241151/1‑250 (MQ=255) aTGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGaa < 1:720635/251‑1 (MQ=255) aTGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCATTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGaa > 1:264661/1‑251 (MQ=255) aaGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACgt < 1:603253/251‑1 (MQ=255) gTCGCGGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTcaaca > 1:554073/1‑251 (MQ=255) cgGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTCAACAAGAt < 1:444629/251‑1 (MQ=255) cgGGCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTCAACAAGAt < 1:106180/251‑1 (MQ=255) ggCGAAGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTCAACAAGATCg > 1:101878/1‑251 (MQ=255) aGCCGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGCGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAAc > 1:625198/1‑199 (MQ=255) ccGGTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTCAACAAGATCGCTTcac > 1:186951/1‑250 (MQ=255) gTATTGATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGt > 1:769660/1‑166 (MQ=255) gATATTTATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAg > 1:69746/1‑196 (MQ=255) tttATAACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTCAACAAGATCGCTTCACCACGATTCACATc < 1:74941/251‑1 (MQ=255) tataACCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTCAACAAGAt < 1:306081/228‑1 (MQ=255) aaCCTCATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTCAACAAGATCGCTTCACCACGATTCACATCCAAGa < 1:319313/251‑1 (MQ=255) | CATGACGATGCGAACCGTGCTTTGATGGGGGCGAACATGCAACGTCAAGCCGTGCCGACATTGCGTGCGGACAAACCGTTAGTCGGTACAGGTATCGAAAAAGCGGTTGCCCTTGACTCCGGTGTGGCGGTTGTGGCAAAACGCGGCGGTACCATCCAATATGTGGATGCTTCCCGCATCGTGGTGAAAGTCAATGAAGACGAAACTGTCGCGGGCGAAGCCGGTATTGATATTTATAACCTTATTAAATATACCCGTTCG‑AACCAAAATACCTGTATCAACCAAATTCCTTGTGTGGAACTGGGCGATCCGGTGGAACGCGGTGAAATCTTGGCAGACGGTCCTTCCACCGATTTAGGTGAATTGGCATTAGGTCAAAACATTCGCGTGGCGTTCATGCCGTGGAACGGTTATAACTTCGAAGACTCCATGTTAGTCTCCGAACGTGTGGTTCAACAAGATCGCTTCACCACGATTCACATCCAAGA > 1/224317‑224804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |