| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,298,171 | T→C | T138T (ACA→ACG) | unknown ← | Ribosomal protein S12p methylthiotransferase accessory factor YcaO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,298,171 | 0 | T | C | 100.0% | 296.9 / NA | 86 | T138T (ACA→ACG) | unknown | Ribosomal protein S12p methylthiotransferase accessory factor YcaO |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (57/29); total (57/29) | |||||||||||
GCGGCAAACTGATGGATTCGGCGATGATTTTGTTTTTTACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGTGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGATGCTAACGCCGCTTTTTTGCTGGCGCCTTTACCGTTGGAAAA > 1/1297930‑1298413 | gCGGCAAACTGATGGATTCGGCGATGATTTTGTTTTTTACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTc > 1:347382/1‑250 (MQ=255) aaaCTGATGGATTCGGCGATGATTTTGTTTTTTACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGAtt > 1:882435/1‑251 (MQ=255) aaaCTGATGGATTCGGCGATGATTTTGTTTTTTACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGAtt < 1:615907/251‑1 (MQ=255) cTGATGGATTCGGCGATGATTTTGTTTTTTACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCgg > 1:133037/1‑251 (MQ=255) atTTTGTTTTTTACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAAt > 1:664222/1‑241 (MQ=255) tGTTTTTTACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGa < 1:376719/251‑1 (MQ=255) ttttttACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGAt < 1:804831/250‑1 (MQ=255) tttttACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCg > 1:729427/1‑251 (MQ=255) tAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAAt < 1:872075/251‑1 (MQ=255) gCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATg > 1:631717/1‑250 (MQ=255) gCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATg > 1:729845/1‑250 (MQ=255) cGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGc < 1:112794/250‑1 (MQ=255) gTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCcg > 1:316026/1‑251 (MQ=255) ttCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCcg < 1:277889/250‑1 (MQ=255) ttCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCcg > 1:272201/1‑250 (MQ=255) acTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTaa < 1:337444/251‑1 (MQ=255) cTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAAc < 1:711628/251‑1 (MQ=255) ccGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTcc > 1:786095/1‑194 (MQ=255) ccGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGAtt < 1:867349/199‑1 (MQ=255) ccGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCaaata > 1:12469/1‑219 (MQ=255) cGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAggg > 1:781745/1‑251 (MQ=255) gCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCa > 1:337483/1‑251 (MQ=255) cgTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATgg < 1:851782/250‑1 (MQ=255) ttGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCAttttt < 1:258414/251‑1 (MQ=255) ttACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAAt > 1:226544/1‑230 (MQ=255) ccGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCaaata < 1:108786/181‑1 (MQ=255) cggACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGc < 1:769730/251‑1 (MQ=255) gcggtgtatattccgcaaaatatcaTGATATTTTGCGGAATATACCCCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACaaa < 1:108118/224‑1 (MQ=255) ccGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAAt > 1:459162/1‑250 (MQ=255) ccGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAAt > 1:47131/1‑250 (MQ=255) gTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCtt < 1:317778/203‑1 (MQ=255) gagaCGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGa > 1:694635/1‑168 (MQ=255) gagaCGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTttc > 1:28338/1‑224 (MQ=255) gTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCaa > 1:356955/1‑251 (MQ=255) gATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATggg > 1:829774/1‑202 (MQ=255) gATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCtt > 1:285005/1‑251 (MQ=255) aTTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGc < 1:96351/248‑1 (MQ=255) ggAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGAAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATc > 1:74604/1‑189 (MQ=255) atatTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGccc > 1:665543/1‑245 (MQ=255) atatTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAAt < 1:676382/250‑1 (MQ=255) ggAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGt > 1:103189/1‑251 (MQ=255) gAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGAt > 1:729989/1‑138 (MQ=255) gAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTaaaa < 1:17599/147‑1 (MQ=255) gAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAAt > 1:187161/1‑148 (MQ=255) gAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATc > 1:844341/1‑172 (MQ=255) gAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTttc < 1:55098/193‑1 (MQ=255) gAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATc < 1:347963/247‑1 (MQ=255) gAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGt > 1:836207/1‑250 (MQ=255) gAATATACACCGCCTGTTGATCCGACTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGt > 1:464962/1‑250 (MQ=255) atatACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATc > 1:734965/1‑170 (MQ=255) atatACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCa > 1:267048/1‑251 (MQ=255) taCACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCaaata > 1:303501/1‑127 (MQ=255) ccGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGccc < 1:778485/226‑1 (MQ=255) ccGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGaaa > 1:809417/1‑248 (MQ=255) cTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATtgg > 1:108196/1‑251 (MQ=255) ggCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGc < 1:275474/179‑1 (MQ=255) ggCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCg > 1:787519/1‑251 (MQ=255) ggCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCg > 1:341623/1‑251 (MQ=255) ggCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCg > 1:362029/1‑251 (MQ=255) ggCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCg > 1:363445/1‑251 (MQ=255) gTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATc > 1:38342/1‑217 (MQ=255) aCATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAAt < 1:840580/116‑1 (MQ=255) aCATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGAt > 1:764412/1‑169 (MQ=255) aCATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAata > 1:615566/1‑251 (MQ=255) aCATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAata > 1:16001/1‑251 (MQ=255) aCATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAata > 1:47386/1‑251 (MQ=255) aCATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAata > 1:76699/1‑251 (MQ=255) cATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAAt > 1:739562/1‑180 (MQ=255) cATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAatat > 1:260190/1‑251 (MQ=255) ggCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGc < 1:83443/250‑1 (MQ=255) ggCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGAGGAAAGTCGCTCGAAATATTCGc > 1:858669/1‑250 (MQ=255) cGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAAt > 1:40171/1‑251 (MQ=255) ggCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATg > 1:272872/1‑251 (MQ=255) gCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATg > 1:126894/1‑250 (MQ=255) cGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAAtt > 1:33549/1‑217 (MQ=255) aCAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGa > 1:515760/1‑251 (MQ=255) cgTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCGGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGATGCTAAcgc < 1:421464/251‑1 (MQ=255) cGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGGTGCTAAcgccg > 1:494941/1‑249 (MQ=255) cGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCAGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAAt < 1:876497/180‑1 (MQ=255) gTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGccc < 1:16312/174‑1 (MQ=255) gATTGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTg < 1:665370/147‑1 (MQ=255) ttGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGATGCTAACGCCGCTTTTTTGCTGgcg > 1:157498/1‑250 (MQ=255) ttGCAAATCCACCAAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGATGCTAACGCCGCTTTTTTGCTGgcg > 1:230982/1‑250 (MQ=255) ccaccaAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGATGCTAACGCCGCTTTTTTGCTGGCGCCTTTACCg < 1:63347/251‑1 (MQ=255) caccaAAAGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGATGCTAACGCCGCTTTTTTGCTGGCGCCTTTACCGt > 1:108511/1‑251 (MQ=255) aGTTCAGGCGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGATGCTAACGCCGCTTTTTTGCTGGCGCCTTTACCGTTGGaaaa > 1:881529/1‑251 (MQ=255) | GCGGCAAACTGATGGATTCGGCGATGATTTTGTTTTTTACATAGCGTTCAAACACTTCCGATAAACCTTGCACGCGTGCTTCAAATTGGCTGTTACCGGCGGACATGCCGTTAGAGACGTACAGATTGGAAATGATATTTTGCGGAATATACACCGCCTGTTGATCCGATTGGCGTACATAGGGCACGGCGACAATGCCGCGTTCGTAATTGCCTGATTGCAAATCCACCAAAAGTTCAGGTGTAAGTTCCTGATTCGGATCGAAATGTTCAAATAAATGATCGTCTAAAATGCCGCGTGGTAACAGGGCTTCATCTTCAATGGGGAACCATTTTTCGTTCGGATAATGCACAAAATCGCTGTTGGCAATGCTTTGCCCTAAATAGAAATCCGTCCAGAAATAATTGGTGGAAAGTCGCTCGAAATATTCGCCCAATGCCGATGCTAACGCCGCTTTTTTGCTGGCGCCTTTACCGTTGGAAAA > 1/1297930‑1298413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |