| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,179,339 | T→C | S128S (AGT→AGC) | unknown → | Multimodular transpeptidase‑transglycosylase (EC 2.4.1.129) (EC 3.4.‑.‑) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,179,339 | 0 | T | C | 100.0% | 243.6 / NA | 72 | S128S (AGT→AGC) | unknown | Multimodular transpeptidase‑transglycosylase (EC 2.4.1.129) (EC 3.4.‑.‑) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (26/46); total (26/46) | |||||||||||
CTGTTACGCCTGACCACGGCAAAGGATCAGAAATATCGTCTTTGGACGCCGTTGGAAGAACTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGTCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACATTCAGCAGAACAATCA > 1/1179097‑1179581 | cTGTTACGCCTGACCACGGCAAAGGATCAGAAATATCGTCTTTGGACGCCGTTGGAAGAACTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACAt > 1:182052/1‑251 (MQ=255) gACCACGGCAAAGGATCAGAAATATCGTCTTTGGACGCCGTTGGAAGAACTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGaaaa > 1:626638/1‑251 (MQ=255) gAAATATCGTCTTTGGACGCCGTTGGAAGAACTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCCGATTCTAcgcg > 1:805005/1‑251 (MQ=255) atatCGTCTTTGGACGCCGTTGGAAGAACTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACAt > 1:396077/1‑219 (MQ=255) tCTTTGGACGCCGTTGGAAGAACTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTC‑GGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGc < 1:276118/250‑1 (MQ=255) ccGTTGGAAGAACTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATc < 1:803316/216‑1 (MQ=255) aaCTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCaa < 1:377955/250‑1 (MQ=255) aaCTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCaa < 1:453442/250‑1 (MQ=255) cTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAg < 1:637610/240‑1 (MQ=255) accacAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGaaa < 1:556276/251‑1 (MQ=255) cacaACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAAtt < 1:863732/251‑1 (MQ=255) cTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACgcgc < 1:154626/209‑1 (MQ=255) tggtggATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGaa < 1:841302/251‑1 (MQ=255) ggtggATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACgcgc < 1:679576/207‑1 (MQ=255) gACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAAACCAGCAGAATCTACGCGCCGCTTAGCTGGAATTACAGTATTCCAAAAGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATgg > 1:632919/1‑251 (MQ=255) gTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAg < 1:811204/193‑1 (MQ=255) gTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAAc < 1:384309/203‑1 (MQ=255) gTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAACTGGAATTACAGTATTCCCAAAGGGAAATTCTGGAAGCCTA‑TTTCAACTTTTCTCCTTTTTGAAGGAACa > 1:673141/1‑251 (MQ=255) gTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAAACGAGCAGATTCTACGCGCCGTTCAGCTGGGATTACAGGATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATgggc > 1:327352/1‑243 (MQ=255) gTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAAACGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAg > 1:726526/1‑193 (MQ=255) tattatCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACTAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGa < 1:26935/251‑1 (MQ=255) tattatCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGa < 1:562784/251‑1 (MQ=255) tattatCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGa < 1:354523/251‑1 (MQ=255) attatCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGaa < 1:463960/251‑1 (MQ=255) ttatCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAg < 1:491650/251‑1 (MQ=255) tatCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAgg < 1:399245/251‑1 (MQ=255) tttCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGGCGGTCAGCTGGAAATACAGTATTCCAAACGGGAAATTACGGAAGCCTA‑TTTTAACTTTGGTCCTTATGGACGGAACAATTAAGgggcgg > 1:289023/1‑251 (MQ=255) gggTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGcac < 1:847315/250‑1 (MQ=255) cAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGa < 1:153470/251‑1 (MQ=255) tCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTTTAAGCGCCGTTCAGCTGGGATTACAGTAttt > 1:780781/1‑173 (MQ=255) tCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAAACGAGCAGATTCTACGCGCCGCTTAGCCGGGATTACAGGATTTCAAAAGGGGAAATCTGGAAGCCTATTTTAAACTTT‑CTCCTTTTGGGCGGAAAATTGAAggggggggggccacgagc > 1:171031/1‑240 (MQ=255) tCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAAACGAGCAGATTCTACGCGCCCTTTAGCTGGGATTACAg > 1:354383/1‑169 (MQ=255) ttACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAAACGAGCAGATTCTACGCGCCGGTCAGCTGGAATTACAGTATTCCAAAAGGGAAAATCTGGAAGCCTA‑TTTCAAATTTGCTCCTTATGGACGGAAAATTGAAGGGGGGGGGACAGCGAG‑cccgg > 1:45362/1‑248 (MQ=255) ggTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAAAGGGAAATTCTGGAAGCCTA‑TTTTAACTTTTCTCCTTATGGACGGAACATTGAAGGGGCGGGGACAACGGG‑CCCGa‑tttt > 1:342854/1‑250 (MQ=255) ttATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGcac < 1:23141/233‑1 (MQ=255) ttATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGa‑tttattt < 1:690304/251‑1 (MQ=255) ttATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGGTCAGCTGGAATTACAGGATTCCAAACGGGGAAATCTGGAAGCCTA‑TTTTAACTTTGCTCCTTATGGACGGAAAATTGAAGGGGCGGGGACAACGGG‑GCTGa‑ttttttt > 1:26354/1‑251 (MQ=255) cgcgGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAAcc < 1:796276/250‑1 (MQ=255) cgcgGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAAcc < 1:38132/250‑1 (MQ=255) gggCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTTTACGCGCCGGTCAGCTGGGATTACCGGATTCCCAAAGGGGAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGGGGGGACAggcaggccggtttttttttaaccggg > 1:655931/1‑225 (MQ=255) gggCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGGAATTCTGGAAGCCTA‑TTTTAACTTTTCTCCTTATTGACGGAACATTTAAGGGGCGGGGACCGCGGG‑CCTGG‑TTTTTTTTTACCGTgg > 1:287051/1‑249 (MQ=255) gggCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGGTCAGCTGGAATTACAGTATTCCAAACGGGAAAATCTGGGAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACAttta > 1:184834/1‑209 (MQ=255) acacAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATa < 1:353232/250‑1 (MQ=255) acacAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAAACGAGCAGATTCTACGCGCCGGTCAGCTGGAATTACAGGATTCCAAAAGGGAAAATCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACgggac > 1:330517/1‑198 (MQ=255) ccTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCaa < 1:798872/145‑1 (MQ=255) ccTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACtt < 1:195733/175‑1 (MQ=255) ttattCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAAttt < 1:103888/251‑1 (MQ=255) ccGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGGAGAGTTTACGCGCCGGTCAGCTGGGATTACAGTATTTCAAACGGGAAATTTTGGGAACCTA‑TTTTAAATTTTTTCCTTATTGACGGAACAATGAAg > 1:806190/1‑181 (MQ=255) ccGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTTCTCCTTATGGACGGAACATTTAAAGGGCGGGCACAGCGGG‑CCTGG‑TTTTTTTTTAACGTGCCAAAAAAAAACCGAATTTGGGGGGAGCCATGa > 1:395564/1‑250 (MQ=255) cGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGa < 1:841958/251‑1 (MQ=255) gACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCg < 1:6646/181‑1 (MQ=255) gACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAAcc < 1:334985/215‑1 (MQ=255) gACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAAACGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAAATCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGG‑TTTTTTTTAAACCCGCCAATAAAAACCTGAAATTTGCGGGAGCCATGAccccgtctcttataa > 1:402031/1‑238 (MQ=255) aCTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAAttt < 1:456731/221‑1 (MQ=255) ccATGCAACTGGCGCGAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAgggg < 1:894492/162‑1 (MQ=255) cgAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACAt < 1:580146/251‑1 (MQ=255) cgAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACAt < 1:801574/251‑1 (MQ=255) cgAATATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACAt < 1:726908/251‑1 (MQ=255) aaTATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACATTc < 1:263681/251‑1 (MQ=255) aaTATTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACATTc < 1:845173/251‑1 (MQ=255) atatTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACATTc < 1:523650/250‑1 (MQ=255) atTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGa < 1:803035/138‑1 (MQ=255) atTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACATTcagc < 1:319768/251‑1 (MQ=255) atTGTGGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAAAGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTTTTTTTAACGTGCCAAAAAAAACCCGAAATTTGCGGAAGCCAAGACCTTTGCGATTTTTCCGAAAAAACCGAACGCTTACATTcag > 1:418291/1‑250 (MQ=255) tgtgGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACATTcagcag < 1:499137/251‑1 (MQ=255) gtgGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACATTcagc < 1:82831/248‑1 (MQ=255) gtgGAGTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCCGGGATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCCCAACGGGCCCTGT‑TTTTTTTTAACC‑TGCCCATAAGAACCTGAATTTTGCGGAAACCAATACCTTTGCGGTTTTTACGaaaaaacccaaccctttaaatccacaga > 1:165511/1‑228 (MQ=255) gTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGGATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGGG‑CCTGATTTTTTTTTAACC‑TGCCAAAAAAAAACTGAATTTTGCGGAAGCCATGACCCTTGCGATTTTACCGGAAAAACCGAACGCTTACATTCAGCAGAACaaa > 1:67688/1‑250 (MQ=255) gTATTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGAcc < 1:320158/203‑1 (MQ=255) aTTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTTCTCCTTATGGACGGAACATTTAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTTTTTTTACCCTGCCCATAAAAAACTGAATTTTGCGGGAGCCATTACCCTGGCGGTTTTATCCAAAAATCCCAACGCCTACATTTAGCAGAACaaaca > 1:106090/1‑248 (MQ=255) aTTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACAt < 1:35830/236‑1 (MQ=255) aTTGATAGCCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACATTcagc < 1:238094/241‑1 (MQ=255) | CTGTTACGCCTGACCACGGCAAAGGATCAGAAATATCGTCTTTGGACGCCGTTGGAAGAACTTTCACCACAACTGGTGGATGCAGTGTTATTTCAGGAAGACGAATGGTTTTATTATCATTTCGGGGTCAATCCTTACGGTTTATTGCGCGGGGCGACACAAACCTATTTATTCGGCGGCTCACCGCAAGGCGGTTCGACTATCACCATGCAACTGGCGCGAATATTGTGGAGTATTGATAGTCGCAACATCGGCGGGAAAATCGAGCAGATTCTACGCGCCGTTCAGCTGGAATTACAGTATTCCAAACGGGAAATTCTGGAAGCCTA‑TTTCAACTTTGCTCCTTATGGACGGAACATTGAAGGGGCGGGCACAGCGAG‑CCTGA‑TTTATTTTAACCGTGCCAATAAGAACCTGAATTTGGCGGAAGCCATGACCTTGGCGATTTTACCGAAAAATCCGAACGCTTACATTCAGCAGAACAATCA > 1/1179097‑1179581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |