| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,165,798 | T→C | intergenic (+37/+267) | unknown → / ← unknown | Multidrug efflux transporter MdtK/NorM (MATE family)/Cys‑tRNA(Pro) deacylase YbaK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,165,798 | 0 | T | C | 100.0% | 176.0 / NA | 53 | intergenic (+37/+267) | unknown/unknown | Multidrug efflux transporter MdtK/NorM (MATE family)/Cys‑tRNA(Pro) deacylase YbaK |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (20/33); total (20/33) | |||||||||||
ATTTTGTTATTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTTGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGAAACTTTTCAGCTATACTGACGCGATTTTTTTGACTCG > 1/1165554‑1166013 | aTTTTGTTATTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGAACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACg > 1:437777/1‑251 (MQ=255) tATTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtc < 1:763314/251‑1 (MQ=255) aTTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtcc < 1:338704/251‑1 (MQ=255) ggTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtccctc < 1:570935/250‑1 (MQ=255) gTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCcgcg > 1:885334/1‑251 (MQ=255) aGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTa > 1:391715/1‑251 (MQ=255) tGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATaa < 1:806658/251‑1 (MQ=255) tGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATaa < 1:562445/251‑1 (MQ=255) gCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtcc > 1:118418/1‑235 (MQ=255) cTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTg < 1:277332/250‑1 (MQ=255) cTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTg < 1:259095/250‑1 (MQ=255) cTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTg < 1:58434/250‑1 (MQ=255) cacgGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCcgcg > 1:376939/1‑219 (MQ=255) cgGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtcc < 1:662622/209‑1 (MQ=255) gATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGAt > 1:530818/1‑196 (MQ=255) gATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTc > 1:387527/1‑242 (MQ=255) gATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTg > 1:818466/1‑251 (MQ=255) gATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTg > 1:676078/1‑251 (MQ=255) gTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAAt > 1:108555/1‑231 (MQ=255) ttCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCt < 1:485627/251‑1 (MQ=255) gcggcATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGcc < 1:293325/250‑1 (MQ=255) aTTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGc < 1:579283/251‑1 (MQ=255) gCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAg < 1:756964/197‑1 (MQ=255) cAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAg < 1:527091/251‑1 (MQ=255) tCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATa < 1:129087/251‑1 (MQ=255) ggATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGc < 1:450584/232‑1 (MQ=255) aTTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATc < 1:466710/250‑1 (MQ=255) aTTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATc < 1:860544/250‑1 (MQ=255) aTTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATc < 1:498871/250‑1 (MQ=255) gCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACtt > 1:375477/1‑251 (MQ=255) cTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACtt > 1:691035/1‑250 (MQ=255) ttCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAAtccctcc < 1:149791/163‑1 (MQ=255) ttCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAAt < 1:215003/239‑1 (MQ=255) tCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAgggg < 1:427524/233‑1 (MQ=255) tggtgAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGa < 1:878030/250‑1 (MQ=255) tggtgAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGa < 1:69247/250‑1 (MQ=255) gACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGc > 1:799395/1‑210 (MQ=255) gTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGATGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATaa < 1:446079/214‑1 (MQ=255) gTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAg < 1:689311/224‑1 (MQ=255) aaaaaCACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAagag < 1:832891/251‑1 (MQ=255) acacAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAg > 1:536613/1‑122 (MQ=255) gCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTatat < 1:503373/250‑1 (MQ=255) atatTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATAtt < 1:197627/193‑1 (MQ=255) atatTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTAc < 1:178023/244‑1 (MQ=255) atatTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGaa > 1:759628/1‑251 (MQ=255) atTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGcc > 1:59546/1‑143 (MQ=255) aGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTg < 1:587407/196‑1 (MQ=255) ggCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATaa > 1:640669/1‑67 (MQ=255) ggAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAg > 1:760573/1‑139 (MQ=255) aaTTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATaaa < 1:540257/145‑1 (MQ=255) atCCTGTAGGTGGGCTTGTCCCACC‑TTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGa < 1:549716/146‑1 (MQ=255) ccTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGAAACTTTTCAGCTATACTGACGCGATTTTTTTGACTCg > 1:535821/1‑251 (MQ=255) cACCTTTTTTGTCTTTCGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGAAACTTTTCAGCTATAc > 1:682517/1‑211 (MQ=255) | ATTTTGTTATTGGGTTGTAGGAATGCCGCTCGGTTACGTTCTGGCACGCACGGATCTCATCGTTCCCGGCGGCATTGCGGCAAAAGGCTTCTGGATTGCTTTCGTGGTGAGCCTGACGATTGCGGCAGTTTTACTGTTTTTCCGTCTGCGAAAAACACAAGGGCAGCCGGACGATATTTTATTGGCAAGGCTGGAGAAATTGAAATAATCCTGTAGGTGGGCTTGTCCCACCTTTTTTGTCTTTTGATACGATAAATCCCTCCCGCGTACATAAAGTGCGGTCACAAAAAATTCTGTTTTTTGAACGTTGGCTATGCCAACGGCCCCGAAGGGGTGAATAAATCACTTCAGTGATTTATGAATATTTTTACAAATGTTTTTTGTTAGCTCAGAAAAAAGAGAATGATTATATTTTACGCCTGAAACTTTTCAGCTATACTGACGCGATTTTTTTGACTCG > 1/1165554‑1166013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |