Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	1	960,296	(AGTTACAATGT)2→1	intergenic (+299/‑94)	unknown → / → unknown	Magnesium and cobalt efflux protein CorC/Apolipoprotein N‑acyltransferase / Copper homeostasis protein CutE

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	960294 =	2 (0.020)	52 (0.630)	40/404	0.8	96.4%	intergenic (+297/‑106)	unknown/unknown	Magnesium and cobalt efflux protein CorC/Apolipoprotein N‑acyltransferase / Copper homeostasis protein CutE
	?	1	= 960282	2 (0.020)					intergenic (+285/‑118)	unknown/unknown	Magnesium and cobalt efflux protein CorC/Apolipoprotein N‑acyltransferase / Copper homeostasis protein CutE

GACAAAAGTGCGGTGGATTTTTGCGGTGTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/960554‑960294 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acattgtaactacTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGACGCGCGCCACCGTTATCGTTCAACTC  <  1/960282‑960037                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACAAAAGTGCGGTGGATTTTTGCGGTGTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAAC                                                                                                                                                                                                                                                                       >  1:359931/1‑250   CAAAAGTGCGGTGGATTTTTGCGGTGTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATT                                                                                                                                                                                                                                                                    >  1:814903/1‑251         TGCGGTGGATTTTTGCGGTGTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAAC                                                                                                                                                                                                                                                               <  1:196696/250‑1           CGGTGGATTTTTGCGGTGTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTA                                                                                                                                                                                                                                                             <  1:383782/250‑1             GTGGATTTTTGCGGTGTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACT                                                                                                                                                                                                                                                           <  1:200132/250‑1                   TTTTGCGGTGTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAA                                                                                                                                                                                                                                                    <  1:404618/251‑1                            GTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAAC                                                                                                                                                                                                                                                                       >  1:520733/1‑223                            GTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCACCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGGAACATTGTAACTACTTATATAAAAAGAAAAA                                                                                                                                                                                                                                           >  1:862372/1‑251                                                      CAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCAC                                                                                                                                                                                                                     >  1:754766/1‑247                                                        GGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGG                                                                                                                                                                                                               >  1:57734/1‑251                                                         GGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGG                                                                                                                                                                                                                 <  1:57367/248‑1                                                            GATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAG                                                                                                                                                                                                             >  1:770874/1‑249                                                            GATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATA                                                                                                                                                                                                                                                       <  1:544275/207‑1                                                             ATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGC                                                                                                                                                                                                            <  1:489518/249‑1                                                             ATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAG                                                                                                                                                                                                             >  1:226601/1‑248                                                             ATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAG                                                                                                                                                                                                                   >  1:274470/1‑242                                                             ATGTAAGACAAGCCCCAATAATAAAAGGGCGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGG                                                                                                                                                                                                                  >  1:176288/1‑243                                                              TGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGG                                                                                                                                                                                                         >  1:641776/1‑251                                                                   GACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCA                                                                                                                                                                                                    >  1:264036/1‑251                                                                         cccaAATAATAAAAGGGTGCAAAGGAAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCC                                                                                                                                                                                                <  1:324663/245‑1                                                                         CCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAG                                                                                                                                                                                                                                                >  1:237942/1‑201                                                                         CCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTA                                                                                                                                                                                                                                                             <  1:710272/188‑1                                                                            CAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑G                                                                                                                                                                                        <  1:770048/251‑1                                                                              ATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAA                                                                                                                                                                                                                                                    >  1:227293/1‑192                                                                               TAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑G                                                                                                                                                                                        >  1:250302/1‑248                                                                               TAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑G                                                                                                                                                                                        >  1:667157/1‑248                                                                               TAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGG                                                                                                                                                                                                                  >  1:485156/1‑225                                                                               TAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAA                                                                                                                                                                                                                                                    <  1:36347/191‑1                                                                                 ATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCT                                                                                                                                                                                                           <  1:734099/230‑1                                                                                                GGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATA                                                                                                                                                                                                                                                     <  1:505071/173‑1                                                                                                      CACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGC                                                                                                                                                                                                       >  1:77912/1‑213                                                                                                                                CGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGC                                                                                                                                                                                                       <  1:204118/187‑1                                                                                                                                     AGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCC                                                                                                                                >  1:242776/1‑250                                                                                                                                     AGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑G                                                                                                                                                                                        <  1:392493/194‑1                                                                                                                                           GTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCT                                                                                                                                                                                                           >  1:686322/1‑172                                                                                                                                           GTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTC                                                                                                                                                                                                                       <  1:646620/160‑1                                                                                                                                           GTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTC                                                                                                                                                                                                                                >  1:611909/1‑151                                                                                                                                             GAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGG                                                                                                                                                                                                                  <  1:397531/163‑1                                                                                                                                                ATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTA                                                                                                                                                                                                                                                             <  1:472263/117‑1                                                                                                                                                 TATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAGGG‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATC                                                                                                                                 <  1:207560/238‑1                                                                                                                                                           TAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAAC                                                                                                                                                                                                                                                               >  1:261741/1‑104                                                                                                                                                              GCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑G                                                                                                                                                                                        >  1:401754/1‑169                                                                                                                                                              GCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATA                                                                                                                                                                                                                                                       <  1:854488/109‑1                                                                                                                                                                      GCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGAT                                                                                                                                      <  1:20837/211‑1                                                                                                                                                                                TCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGC                                                                                    <  1:3273/251‑1                                                                                                                                                                                         ATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCAC                                                                                                           >  1:500474/1‑219                                                                                                                                                                                         ATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGAT                                                                                                                                      <  1:459356/192‑1                                                                                                                                                                                                                 GAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑GG                                                                                                                                                                                       >  1:128512/1‑119                                                                                                                                                                                                                                  tctcccgACCACAGCCGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATG                                                    <  1:894417/226‑1                                                                                                                                                                                                                                   ctcccgACCACAGCCGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAAT                                                     >  1:149800/7‑231                                                                                                                                                                                                                                   ctcccgACCACAGCCGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAAT                                                                     <  1:805056/209‑1                                                                                                                                                                                                                                      GAAACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGG                               <  1:351018/250‑1                                                                                                                                                                                                                                        AACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGA                            <  1:314580/251‑1                                                                                                                                                                                                                                        AACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGA                            >  1:876185/1‑251                                                                                                                                                                                                                                        AACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTAT                                                        <  1:624899/223‑1                                                                                                                                                                                                                                        AACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTAT                                                        <  1:497779/223‑1                                                                                                                                                                                                                                        AACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATT                                                          <  1:140671/221‑1                                                                                                                                                                                                                                        AACCACAGCTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑G                                                                                                                                                                                        <  1:627409/95‑1                                                                                                                                                                                                                                                CTGTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTT                                                 <  1:570037/222‑1                                                                                                                                                                                                                                                  GTTCGAAACATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑GGGGAGGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGCAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATG                                                    >  1:40340/1‑217                                                                                                                                                                                                                                                          CATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGACGCGCGCCACCGTTATCG          >  1:41699/1‑251                                                                                                                                                                                                                                                          CATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGACGCGCGCCACCGTTATCG          >  1:81856/1‑251                                                                                                                                                                                                                                                          CATTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑GCGGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCAC                                                                                                           >  1:233502/1‑154                                                                                                                                                                                                                                                            TTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGACGCGCGCCACCGTTATCGTT        >  1:553490/1‑251                                                                                                                                                                                                                                                            TTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGC                                                                                    <  1:170041/175‑1                                                                                                                                                                                                                                                            TTGTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑GGG                                                                                                                                                                                      >  1:48814/1‑77                                                                                                                                                                                                                                                              GTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGACGCGCGCCACCGTTATCGTTC       >  1:52326/1‑250                                                                                                                                                                                                                                                              GTAACTACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACAGCTG                                       >  1:729028/1‑218                                                                                                                                                                                                                                                                   TACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAA                                                      <  1:309034/198‑1                                                                                                                                                                                                                                                                    ACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGACGCGCGCCACCGTTATCGTTCAACTC  >  1:63233/1‑249                                                                                                                                                                                                                                                                    ACTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATG                                                    >  1:803778/1‑199                                                                                                                                                                                                                                                                     CTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGAG‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGACGCGCGCCACCGTTATCGTTCAACTC  <  1:657752/248‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACAAAAGTGCGGTGGATTTTTGCGGTGTTTTTATCACCCAAATCAAACCGAACAGGGAGATGTAAGACAAGCCCCAATAATAAAAGGGTGCAAAGGCAAACACGCCGGCAGCGCCGAAAATGAGTGCGATAAGATAAGTGAAATATTTGTTCATAAGCGGGATAGCGCGCGTTTTCTCACGCAATTCCTAAATTTTCGTTATTTAATGAAATAAACGGCACGCGTCGGGAAACCACAGCTGTTCGAAACATTGTAACTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/960554‑960294 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acattgtaactacTTATATAAAAAGAAAAAAAACTTGGCTCCCCTCGTTCACAGGGGGAGCTGGGCGCAGCCCTGA‑‑G‑GGGG‑GGGAAAATCTCAATTTTTAAGCATGATCTTGTGAAAAAATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACCTTGCCCGTAAACGGAGGAAGGCAAGATATTTAAAAATATCAATGAATTATAATGTTTCGAACGGCTGTGGTCGGGAGACGCGCGCCACCGTTATCGTTCAACTC  <  1/960282‑960037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.