| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 5609 | NA (NA) | 8 (0.090) | 7/420 | 5.5 | NA | coding (10/762 nt) | unknown | Mobile element protein |
| ? | 1 | = 5819 | NA (NA) | coding (220/762 nt) | unknown | Mobile element protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CCTCAACGCCCTAAAATAGTGAAGCCAAAGATGAAAAAGAAAGCGATTGAAATCCCGGAACAAACAGACTTTTCCCCAAAAGCGTTTAAAAAGCTGCAACGAGAGCTGGCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/5355‑5609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgttTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGGTAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACG < 1/5819‑5571 CCTCAACGCCCTAAAATAGTGAAGCCAAAGATGAAAAAGAAAGCGATTGAAATCCCGGAACAAACAGACTTTTCCCCAAAAGCGTTTAAAAAGCTGCAACGAGAGCTGGCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCT < 1:101510/251‑1CCTCAACGCCCTAAAATAGTGAAGCCAAAGATGAAAAAGAAAGCGATTGAAATCCCGGAACAAACAGACTTTTCCCCAAAAGCGTTTAAAAAGCTGCAACGAGAGCTGGCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCT < 1:20198/251‑1CCTCAACGCCCTAAAATAGTGAAGCCAAAGACGAAAAAGAAAGCGATTGAAATCCCGGAACAAACAGACTTTTCCCCAAAAGCGTTTAAAAAGCTGCAACGAGAGCTGGCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCT < 1:821345/251‑1 GATGAAAAAGAAAGCGATTGAAATCCCGGAACAAACAGACTTTTCCCCAAAAGCGTTTAAAAAGCTGCAGCGAGAGCTGGCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTT < 1:824205/226‑1 GCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCA > 1:338931/1‑234 CGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCG‑‑TTCTA‑‑TCTTTTATTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGAT > 1:562345/1‑251 GTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCT > 1:817342/1‑133 CCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCG‑‑TTCTA‑‑CCTTTTATTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTT > 1:46346/1‑248 AAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACT < 1:709404/251‑1 gtttTGCCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGC > 1:456071/5‑239 GCCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCAT > 1:847494/1‑251 CCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATT > 1:734988/1‑251 CCTCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCAT < 1:215071/250‑1 TCGTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTG < 1:838348/106‑1 TCGTTTTCCATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGat < 1:131697/213‑3 GTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGGTAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAA > 1:382834/1‑250 GTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGGTAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAA > 1:856710/1‑250 GTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAAC > 1:308548/1‑193 GTTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACAC < 1:425020/64‑1 TTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGGTAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACG < 1:217231/251‑1 TTTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGATAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACG > 1:491060/1‑251 CCTCAACGCCCTAAAATAGTGAAGCCAAAGATGAAAAAGAAAGCGATTGAAATCCCGGAACAAACAGACTTTTCCCCAAAAGCGTTTAAAAAGCTGCAACGAGAGCTGGCATTAGCACGTGCACAGATTGCTTACCTAAAGGAGTTGGAGGCACTCGACCGTCAAAAACAGCGACAGAAAAAAGAAAAATCATTGAAAGATTGAAGCCAAATCACGCGTTAAATGACTTACTTCGTGTGGCTAAAATGCCTCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/5355‑5609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgttTTCTATGTCTTTTCTTGCGTAAAATAGAATGAATACCTAACGCATTCATCAGTTTTAACACCGTTTTATGATTCAAATGGAAACCCATTTGACGTAATTTGAGTGTCATTGGGCGATAGCCATCTCGTTTTCTGTTCTTTTTATACCGCAACAAGATAGTTTCTTTTATCTCACGATAATCGTGTTTAACTTGCTGATAATAAAAGGTAGAACGAGGCATTTTAGCCACACGAAGTAAGTCATTTAACG < 1/5819‑5571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |