| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,269,532 | 2 bp→GA | intergenic (+109952/+151404) | unknown → / ← unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,269,532 | 0 | C | G | 98.2% | 132.9 / ‑6.1 | 54 | intergenic (+109952/+151405) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (28/25); minor base T (1/0); total (29/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | 1 | 1,269,533 | 0 | C | A | 100.0% | 146.5 / NA | 54 | intergenic (+109953/+151404) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (29/25); total (29/25) | |||||||||||
TAAATATTGATTTATCAAGACTTATTTAGAAGTGTAAGCATAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGCCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAAATCATCAG‑CGCGCAACAAATAAAAATGCCCGAATAACATCGAGCATTATTTACCGGGCTGCAAGCCTTCGCCCTGCA‑TTTTCCGCAAGC‑GGAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTCGCGTTTTATAAGTGT > 1/1269317‑1269746 || taaataTTGATTTATCAAGACTTATTTAAAAATGTAAGCATAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACtt < 1:844796/251‑1 (MQ=255) aTTTATCAAGACTTATTTAAAAATGTAAGCATAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTaaaa < 1:784907/251‑1 (MQ=255) tttATCAAGACTTATTTAAAAATGTAAGCATAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAAt > 1:268366/1‑251 (MQ=255) tATCAAGACTTATTTAAAAATGTAAGCATAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGTAAATTTTTATTTCTTGATT‑AAATTTTGGGACGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTATCGGGCTGCAACCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCa > 1:711642/1‑251 (MQ=255) gACTTATTTAAAAATGTAAGCATAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAAt > 1:426022/1‑243 (MQ=255) aaaaatgtAAGCATAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAg < 1:756241/246‑1 (MQ=255) aaaatgtAAGCATAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGt < 1:739068/247‑1 (MQ=255) tAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTc < 1:791023/234‑1 (MQ=255) ttCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGAtttt > 1:341661/1‑251 (MQ=255) cGTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTa > 1:613501/1‑228 (MQ=255) gTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTa < 1:303813/227‑1 (MQ=255) gTATCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCAATTCTCGATTTAATTTATGGA‑CGCGGAAAAAATAAAAATGCCCGAATAACATTCTGCCTGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGGAAAATCACTATATCTg > 1:226758/1‑219 (MQ=255) aTCGCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCAatttcgttaaaaaactatcaaac < 1:297496/251‑20 (MQ=255) gCATTATCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTa > 1:531319/1‑222 (MQ=255) aTCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTatat > 1:171824/1‑206 (MQ=255) aTCTAATCAGCAGTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAg > 1:790901/1‑251 (MQ=255) gcagTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATg > 1:498703/1‑251 (MQ=255) gTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAAt < 1:799159/186‑1 (MQ=255) gTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCa < 1:400230/208‑1 (MQ=255) gTTATTACGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGaaa > 1:41444/1‑251 (MQ=255) ttattaCGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGaaa < 1:521567/250‑1 (MQ=255) ttaCGTGGCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAAcc < 1:875811/251‑1 (MQ=255) gcTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTTAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCa > 1:484113/2‑251 (MQ=255) gcTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACCAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCa > 1:575145/2‑251 (MQ=255) ttAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTc > 1:723725/1‑185 (MQ=255) ttGCAGGGGCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGttattt > 1:689263/1‑251 (MQ=255) gggCGGGAAATTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTtattttattt < 1:712035/250‑1 (MQ=255) aTTTTCATTTCTCGATTAAATTTAGGTA‑CGCGCAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGac < 1:850041/251‑1 (MQ=255) ttctcgattaaatttaggtacgcgcAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGa < 1:203027/231‑1 (MQ=255) ctcgattaaatttaggtacgcgcAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAAc < 1:322230/233‑1 (MQ=255) ctcgattaaatttaggtacgcgcAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAAc < 1:717953/233‑1 (MQ=255) attaaatttaggtacgcgcAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTc < 1:89368/132‑1 (MQ=255) ttaaatttaggtacgcgcAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATca < 1:137407/238‑1 (MQ=255) aatttaggtacgcgcAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACAt < 1:212832/241‑1 (MQ=255) atttaggtacgcgcAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAAc > 1:275550/10‑242 (MQ=255) ggtacgcgcAAAAAATAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATca > 1:57031/5‑242 (MQ=255) aaaaaTAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATc > 1:524522/3‑114 (MQ=255) aaaTAAAAATGCCCGAATAACATCGAGCATGGCTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTa > 1:721810/1‑251 (MQ=255) tAAAAATGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACAt < 1:18069/251‑1 (MQ=255) aaaaTGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATc < 1:791560/250‑1 (MQ=255) tGCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGa < 1:321878/251‑1 (MQ=255) gCCCGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGa > 1:251811/1‑250 (MQ=255) cccGAATAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGAc < 1:315815/250‑1 (MQ=255) tAACATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTcg > 1:624089/1‑251 (MQ=255) aCATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGa > 1:92661/1‑241 (MQ=255) aCATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTcgcg > 1:796521/1‑251 (MQ=255) cATCGAGCATGGTTTACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTCGCGt > 1:871823/1‑251 (MQ=255) gagcatggtttACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTCGCGTTTta > 1:21991/9‑251 (MQ=255) tggtttACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTCGCGTTTTATAAgt > 1:283417/4‑251 (MQ=255) ggtttACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTCGCGTTTTATAAgtg > 1:119271/3‑251 (MQ=255) gtttACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAGACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTCGCGTTTTATAAgtgt > 1:639394/2‑251 (MQ=255) gtttACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTtattttattt < 1:587545/173‑1 (MQ=255) gtttACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTCGCGttt < 1:882242/241‑1 (MQ=255) gtttACCGGGCTGCAAGCCTTCGCCCTACATTTTTGAGCTTGCTCAAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTCGCGTTTTATAAgtgt > 1:828510/2‑251 (MQ=255) || TAAATATTGATTTATCAAGACTTATTTAGAAGTGTAAGCATAAATTCAAGCACGTATCGCATTATCTAATCAGCAGTTATTACGTGCCTTTAGGGGTATTTGCAGGGGCGGGAAATTTTCATTTCTCGATTAAAATCATCAG‑CGCGCAACAAATAAAAATGCCCGAATAACATCGAGCATTATTTACCGGGCTGCAAGCCTTCGCCCTGCA‑TTTTCCGCAAGC‑GGAAAATAGTTAGACAAGTTTCACTTGGAGTAAAATCACTATATCTGTCTTAGTATCATTTTTGGATTTTCCCGTTAAAAAACCTTTAGGAAGAAATGAAAAACCTGTTTCACCTTCCGTTATTTTATTTTCAGCCAGACCACCAAGAACAATCACATCGCCATTTTTTACACTTACATCTGTGACAATGTCGCGTTTTATAAGTGT > 1/1269317‑1269746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |