Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 860,343 2 bp→GA intergenic (‑10686/‑61874) unknown ← / → unknown tRNA‑Met‑CAT/tRNA‑Leu‑GAG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1860,3430TG100.0% 165.2 / NA 60intergenic (‑10686/‑61875)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (21/39);  total (21/39)
*1860,3440GA100.0% 166.0 / NA 60intergenic (‑10687/‑61874)unknown/unknowntRNA‑Met‑CAT/tRNA‑Leu‑GAG
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (21/39);  total (21/39)

ATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACTAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATATAATCATCTGCCTGTAATAAATGACCTTTGCTTACGTCATTCTTTAACTCGGCAGTTAAAATTAGCTTTTCCGGTTTTTTCTCAGCTTCCGGAACCTGCTGATTATTTATTATTGTTTGTTGATTTTCAGTATTGTCAAATGTTGGCATAAACATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTCTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGT  >  1/860101‑860580
                                                                                                                                                                                                                                                  ||                                                                                                                                                                                                                                            
aTTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGatta                                                                                                                                                                                                                                       <  1:485190/251‑1 (MQ=255)
aTTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGatt                                                                                                                                                                                                                                        <  1:11954/250‑1 (MQ=255)
     ttgGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATtta                                                                                                                                                                                                                                   <  1:100097‑M1/250‑4 (MQ=255)
     ttgGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATtta                                                                                                                                                                                                                                   <  1:90435‑M1/250‑4 (MQ=255)
             aaaaGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattg                                                                                                                                                                                                                          <  1:133137‑M1/251‑13 (MQ=255)
             aaaaGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattg                                                                                                                                                                                                                          <  1:732558‑M1/251‑13 (MQ=255)
                 gAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttg                                                                                                                                                                                                                      >  1:828673‑M1/1‑235 (MQ=255)
                       gCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgatt                                                                                                                                                                                                                >  1:376894‑M1/1‑229 (MQ=255)
                       gCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATtta                                                                                                                                                                                                                                   <  1:242615‑M1/232‑4 (MQ=255)
                               aTTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtat                                                                                                                                                                                                        <  1:873148‑M1/251‑31 (MQ=255)
                                          ttAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATtta                                                                                                                                                                                                                                   <  1:106041‑M1/213‑4 (MQ=255)
                                                 gCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattg                                                                                                                                                                                                                          <  1:641245‑M1/215‑13 (MQ=255)
                                                   cTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaac                                                                                                                                                                                    <  1:150762‑M1/251‑51 (MQ=255)
                                                      gTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattg                                                                                                                                                                                                                          <  1:504269‑M1/210‑13 (MQ=255)
                                                         aTCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatg                                                                                                                                                                              <  1:481173‑M1/251‑57 (MQ=255)
                                                            ccTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcag                                                                                                                                                                                                           <  1:37633‑M1/219‑28 (MQ=255)
                                                                        ttttAGTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaacc                                                                                                                                                               <  1:235054‑M1/251‑72 (MQ=255)
                                                                             gTCGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtt                                                                                                                                                                                                                        >  1:502241‑M1/1‑175 (MQ=255)
                                                                             gTCGTAGCCTCTCTTAGGTCATGGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgt                                                                                                                                                                                                                     <  1:433360‑M1/192‑18 (MQ=255)
                                                                               cGTAGCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcg                                                                                                                                                        <  1:178130‑M1/251‑79 (MQ=255)
                                                                                   gCCTCTCTTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaacc                                                                                                                                                               <  1:674694‑M1/240‑72 (MQ=255)
                                                                                       ctctTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGatta                                                                                                                                                                                                                                       >  1:232937/1‑164 (MQ=255)
                                                                                       ctctTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaac                                                                                                                                                                >  1:237051‑M1/1‑165 (MQ=255)
                                                                                       ctctTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATtta                                                                                                                                                                                                                                   >  1:286945‑M1/1‑165 (MQ=255)
                                                                                       ctctTAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATtta                                                                                                                                                                                                                                   <  1:159570‑M1/168‑4 (MQ=255)
                                                                                           tAGGTCATTGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaa                                                                                                                                            <  1:10872‑M1/251‑91 (MQ=255)
                                                                                                  ttGTCGACCAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaa                                                                                                                                     >  1:774508‑M1/1‑154 (MQ=255)
                                                                                                            gTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatg                                                                                                                                                                              <  1:562842‑M1/200‑57 (MQ=255)
                                                                                                             tGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttc                                                                                                                             <  1:399151‑M1/248‑106 (MQ=255)
                                                                                                              gCACTGTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgc                                                                                                                                                                    <  1:471454‑M1/208‑67 (MQ=255)
                                                                                                                   gTCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTCTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattca                                                                                                                    >  1:212368‑M1/1‑137 (MQ=255)
                                                                                                                    tCTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcat                                                                                                                   <  1:497831‑M1/251‑116 (MQ=255)
                                                                                                                     cTTCAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGCAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcatt                                                                                                                  >  1:232269‑M1/1‑135 (MQ=255)
                                                                                                                        cAGGGACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATTTattattattg                                                                                                                                                                                                                          <  1:41512/144‑5 (MQ=255)
                                                                                                                            gACAGAAATCTCATTTAAAATGTAATCATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttac                                                                                                            <  1:623529‑M1/250‑123 (MQ=255)
                                                                                                                                               atgtaatcATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaa                                                                                        >  1:12302‑M1/4‑109 (MQ=255)
                                                                                                                                               atgtaatcATCTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaa                                                                                                                        >  1:789563‑M1/4‑109 (MQ=255)
                                                                                                                                                      catcTGCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaa                                                                                                                        <  1:565284‑M1/212‑111 (MQ=255)
                                                                                                                                                           gCCTGTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatg                                                                                                                                                                              >  1:278403‑M1/1‑97 (MQ=255)
                                                                                                                                                               gTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgct                                                                         >  1:707386‑M1/1‑93 (MQ=255)
                                                                                                                                                               gTAATAAATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattc                                                                                                                     <  1:578539‑M1/206‑114 (MQ=255)
                                                                                                                                                                  ataaATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccg                                                                                                                                                              >  1:186333‑M1/1‑90 (MQ=255)
                                                                                                                                                                   taaATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaggcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaat                                                                     >  1:436300‑M1/1‑89 (MQ=255)
                                                                                                                                                                   taaATGACCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatg                                                                                                                                                                              >  1:883051‑M1/1‑89 (MQ=255)
                                                                                                                                                                         aCCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaatt                                                              <  1:545283‑M1/251‑169 (MQ=255)
                                                                                                                                                                         aCCTTTGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaat                                                               <  1:166806‑M1/250‑168 (MQ=255)
                                                                                                                                                                             ttGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaattaatt                                                          <  1:750939‑M1/251‑173 (MQ=255)
                                                                                                                                                                             ttGCTCACGTCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaa                                                                                                                                            >  1:460218‑M1/1‑79 (MQ=255)
                                                                                                                                                                                      tCATTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaattaatttgatagagc                                                 <  1:146274‑M1/251‑182 (MQ=255)
                                                                                                                                                                                        aTTCTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaat                                                                                                                       >  1:378179‑M1/1‑68 (MQ=255)
                                                                                                                                                                                           cTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaattaatttgatagagccatgt                                            <  1:369374‑M1/251‑187 (MQ=255)
                                                                                                                                                                                           cTTTAATTCGGCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagc                                                                                                                                                   >  1:380861‑M1/1‑65 (MQ=255)
                                                                                                                                                                                                     gCAGTTAAAATTAGCTTTTCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaattaatttgatagagccatgtttatcataa                                   <  1:31455‑M1/250‑196 (MQ=255)
                                                                                                                                                                                                                    ttttCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaattaatttgatagagccatgtttatcataaagccaaggcttattgc                   <  1:807160‑M1/251‑212 (MQ=255)
                                                                                                                                                                                                                     tttCCGGCTTTTTCTCAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacc                                                                                                           <  1:465431‑M1/162‑124 (MQ=255)
                                                                                                                                                                                                                                 tctcAGTTTCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaattaatttgatagagccatgtttatcataaagccaaggcttattgctacgccataaggc      <  1:896131‑M1/251‑225 (MQ=255)
                                                                                                                                                                                                                                      gtttccGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaattaatttgatagagccatgtttatcataaagccaaggcttattgctacgccataaggcaatc  >  1:147695‑M1/3‑22 (MQ=255)
                                                                                                                                                                                                                                      gtttccGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaattaatttgatagagccatgtttatcataaagccaaggcttattgctacgccataaggc      >  1:48559‑M1/3‑22 (MQ=255)
                                                                                                                                                                                                                                        ttCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttacccttaattaaattttaacaaagtaaagtttccgctcaatcaaaattaatttgatagagccatgtttatcat                                     <  1:564812‑M1/213‑194 (MQ=255)
                                                                                                                                                                                                                                        ttCCGGAACCGACTGATTATttattattattgtttgttgattttcagtattgtcaaatgctggcataaacataatgccaccaatgccaaccgctagcgtaagcactgaaatgatcaagagcgttctgtaattcattttttaccctaattaaattttaacaaagtaaagtttccgctcaatcaaaat                                                                <  1:651670‑M1/186‑167 (MQ=255)
                                                                                                                                                                                                                                                  ||                                                                                                                                                                                                                                            
ATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTTAGGTCATTGTCGACTAGTGCACTGTCTTCAGGGACAGAAATCTCATTTAAAATATAATCATCTGCCTGTAATAAATGACCTTTGCTTACGTCATTCTTTAACTCGGCAGTTAAAATTAGCTTTTCCGGTTTTTTCTCAGCTTCCGGAACCTGCTGATTATTTATTATTGTTTGTTGATTTTCAGTATTGTCAAATGTTGGCATAAACATAATGCCACCAATGCCAACCGCTAGCGTAAGCACTGAAATGATCAAGAGCGTTCTGTAATTCATTTTTTACCCTTAATTAAATTTTAACAAAGTAAAGTCTCCGCTCAATCAAAATTAATTTGATAGAGCCATGTTTATCATAAAGCCAAGGCTTATTGCTACGCCATAAGGCAATCCGT  >  1/860101‑860580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑