| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 859,969 | 2 bp→AT | intergenic (‑10312/‑62248) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 859,969 | 0 | C | A | 100.0% | 100.8 / NA | 38 | intergenic (‑10312/‑62249) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (17/21); total (17/21) | |||||||||||
| * | 1 | 859,970 | 0 | A | T | 100.0% | 100.3 / NA | 38 | intergenic (‑10313/‑62248) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (17/21); total (17/21) | |||||||||||
TCTCTATCCAGTGAATAGAATTTTTTTGCTTGTTCAGCAGTTATTTTTAGTGCTACATAACCAGCATATTCTTGATTGTTTGGAATCCCG‑TCTGCTGCCTTTTCAGCTTCAGGAGCACCTTGTTCTGTTGATTGAGTAAAGTTTCTTGCTTGTAAAACCAATACTTTACCTAAAATTTTAACTAAATCTTTACGATCATAAGTGTTGCGCGAATCTGAAGCAATTTGTTGGCTATAGATAGCAACATAGTCTCCACTTAAAATAGTATTTAGAATGTAATCATCACCAGATTTAACATAGATGCGATATGCAACTTCTTGATTCGGATCTAGGCTGGATGTAAAGAATCTAGGATCGTTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTT > 1/859728‑860192 || tctcTATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTACAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGtctc > 1:453155/1‑250 (MQ=255) ctctATCCAGTGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTccg > 1:885580/1‑250 (MQ=255) tGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGATCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAAt < 1:454188/249‑1 (MQ=255) tGAATAGAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGATCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAAt < 1:448427/249‑1 (MQ=255) gAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTa > 1:543537/1‑251 (MQ=255) gAATTTTTTAGCTTGTTCAGCAGTTATTTTTAATGCTACATAACCGGCATATACTTCACTATTTGG‑AGCCAGACCTAACGCTTTCTCAGTTTCA‑GTG‑‑CCTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTa > 1:2960/1‑251 (MQ=255) ttctcagtttcagtgccTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAgg < 1:167761/236‑1 (MQ=255) tgccTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATGGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGgag < 1:54289/247‑1 (MQ=255) tgccTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGgag < 1:91141/247‑1 (MQ=255) gccTTGTTCTGCTACTTGAGCAAAATTCCGTGCTTGTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGgagaga > 1:740715/2‑251 (MQ=255) gttctgctacttgagcaaaattccgtgcttgTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGataata > 1:47873/26‑251 (MQ=255) ctgctacttgagcaaaattccgtgcttgTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGa < 1:154701/228‑1 (MQ=255) ctgctacttgagcaaaattccgtgcttgTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTGGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGAt < 1:87582/229‑1 (MQ=255) aaattccgtgcttgTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGaaa < 1:564018/243‑1 (MQ=255) ccgtgcttgTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAAc < 1:682175/248‑1 (MQ=255) cgtgcttgTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAAcc < 1:412097/249‑1 (MQ=255) cttgTAGAACCACTGCCTTACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAAcc < 1:141345/247‑1 (MQ=255) aaccactgccttACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGAtt < 1:716179/211‑1 (MQ=255) aaccactgccttACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACAt < 1:605186/241‑1 (MQ=255) accactgccttACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAg < 1:639918/180‑1 (MQ=255) gccttACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTg > 1:366099/4‑250 (MQ=255) gccttACCTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATAAGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATttgttg > 1:841199/4‑219 (MQ=255) cTAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTaaa > 1:35820/1‑251 (MQ=255) tAAAACTTTAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAAt < 1:105407/251‑1 (MQ=255) aaactttAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAg < 1:263498/247‑1 (MQ=255) aactttAACTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGc < 1:283197/248‑1 (MQ=255) aaCTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCt > 1:8770/1‑247 (MQ=255) cTAAATCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAAt < 1:553043/251‑1 (MQ=255) tCTTTACGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATcc > 1:667185/1‑248 (MQ=255) aCGATCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATAc < 1:218883/251‑1 (MQ=255) aTCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCAt > 1:10668/1‑251 (MQ=255) aTCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCAt > 1:626647/1‑251 (MQ=255) aTCATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAAAGATAATAGATTTGTTGGATAGAAAAg > 1:432130/1‑197 (MQ=255) cATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATccc > 1:209340/1‑239 (MQ=255) cATAAGTATTGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCAttt > 1:98335/1‑251 (MQ=255) gtattGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCAt < 1:187440/241‑1 (MQ=255) gtattGCGGGAATCTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGt > 1:769804/4‑251 (MQ=255) cTGAAGCGGTTTGCTGGCTATAAACAGATACATAGTCTCCGCTTAAAATAGTATTTAGAATGTAATCATCGCCAGATCTAACATAGATGCGATATGCGACTTCTTGACTTGGATTCAAGCTGGAAGTAAAGAATCTAGGATCATTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCtt < 1:125742/251‑1 (MQ=255) || TCTCTATCCAGTGAATAGAATTTTTTTGCTTGTTCAGCAGTTATTTTTAGTGCTACATAACCAGCATATTCTTGATTGTTTGGAATCCCG‑TCTGCTGCCTTTTCAGCTTCAGGAGCACCTTGTTCTGTTGATTGAGTAAAGTTTCTTGCTTGTAAAACCAATACTTTACCTAAAATTTTAACTAAATCTTTACGATCATAAGTGTTGCGCGAATCTGAAGCAATTTGTTGGCTATAGATAGCAACATAGTCTCCACTTAAAATAGTATTTAGAATGTAATCATCACCAGATTTAACATAGATGCGATATGCAACTTCTTGATTCGGATCTAGGCTGGATGTAAAGAATCTAGGATCGTTCGGAGAGATAATAGATTTGTTGGATAGAAAAGAACCAGCTCTGACATTTTCTGCCATTAAATAGCCTTGTAATCCCTGAATACCATTTTTAGTCGTAGCCTCTCTT > 1/859728‑860192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |