| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 855,966 | 2 bp→GA | intergenic (‑6309/‑66251) | unknown ← / → unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 855,966 | 0 | A | G | 100.0% | 211.8 / NA | 73 | intergenic (‑6309/‑66252) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (39/34); total (39/34) | |||||||||||
| * | 1 | 855,967 | 0 | G | A | 100.0% | 198.2 / NA | 73 | intergenic (‑6310/‑66251) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Leu‑GAG |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (39/34); total (39/34) | |||||||||||
CTTGTAACATTTGGAATGCTTCTCCACCACGGCATTCGCCCACAATAATACGCTCAGGACGCATACGCAATGCATTTATTACTAAGTCTTGCATAGTAACTTCGCCTGTATGCTCAACGCCGGCTAAACGCGTTTCCAGGCGTACAACATGAGGCTGTTCCAAACGCAGCTCGGCAGTATCTTCTAGTGTGATGACACGTTCGGTATGGGAAATATAGTTAGATAGCGCATTAAGTAAGGTTGTTTTACCAGATCCTGTACCACCTGACACAATTATATTTACCCGGGATCTGGCAGCAATAATTAAGAAATTCGCCATTTCGCGAGTCATAGAACCAAAATTTACAAGCTCTTGCAATGTTTTTTTATTCTTACTGAATTTACGAATAGAAATGGATGTGCCATCTAATGCAATCGGTGCAATAACAACATTTAAACGGCTGCCATCAGGTAGTCGGGAGTCCACTAGTGGAC > 1/855729‑856202 || cTTGTAACATCTGGAATGCTTCTCCACCACGGCATTCACCTACGATAATACGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTAccg > 1:205371/1‑250 (MQ=255) gTAACATCTGGAATGCTTCTCCACCACGGCATTCACCTACGATAATACGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGAt > 1:245260/1‑251 (MQ=255) tctGGAATGCTTCTCCACCACGGCATTCACCTACGATAATACGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTa > 1:494249/3‑251 (MQ=255) ctGGAATGCTTCTCCACCACGGCATTCACCTACGATAATACGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTac < 1:334492/250‑1 (MQ=255) aaTGCTTCTCCACCACGGCATTCACCTACGATAATACGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTaccac < 1:829725/250‑1 (MQ=255) ccacGGCATTCACCTACGATAATACGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATtat > 1:144208/1‑251 (MQ=255) acGGCATTCACCTACGATAATACGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTatat < 1:644994/251‑1 (MQ=255) ggCATTCACCTACGATAATACGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATAttt > 1:493036/1‑251 (MQ=255) gCATTCACCTACGATAATACGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATAttt < 1:889650/250‑1 (MQ=255) acctacgataataCGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTac < 1:361783/217‑1 (MQ=255) ataataCGCTCAGGACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTGCCACCTGACACAATTATATTTACTCGAGATCTGgc < 1:63340/251‑1 (MQ=255) ggACGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTaa > 1:480766/1‑251 (MQ=255) cGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTac > 1:146158/1‑202 (MQ=255) cGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGgc > 1:818038/1‑236 (MQ=255) cGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTaaaaa > 1:608606/1‑248 (MQ=255) cGCATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTaaaaa > 1:389156/1‑248 (MQ=255) cATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTac < 1:794791/200‑1 (MQ=255) cATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGgc < 1:311426/234‑1 (MQ=255) cATACGTAGTGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAAt > 1:241731/1‑251 (MQ=255) tacgtagtGCATTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAAttt > 1:96476/8‑250 (MQ=255) aTTTATTACTAAATCCTGCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATcg > 1:554324/1‑250 (MQ=255) gCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTac > 1:558827/1‑171 (MQ=255) gCATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCgaaa > 1:354902/1‑251 (MQ=255) cATAGTAACCTCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAAt > 1:815454/1‑251 (MQ=255) acctCGCCTGTATGCTCAACGCCGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAg < 1:579715/248‑1 (MQ=255) ccGGCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTac < 1:46410/250‑2 (MQ=255) ggCTAAACGTGTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTactc < 1:628033/250‑4 (MQ=255) tgTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGaac < 1:384333/249‑2 (MQ=255) gTTTCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATAttt > 1:100438/1‑150 (MQ=255) tttCAAGGCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCtttttt > 1:626718/1‑234 (MQ=255) gCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTAct < 1:722098/145‑2 (MQ=255) gCGTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAAtgg > 1:508393/1‑249 (MQ=255) gTACAACATGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTActcg > 1:409918/1‑142 (MQ=255) caacaTGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGa > 1:656595/1‑190 (MQ=255) acaTGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAAc < 1:560235/190‑1 (MQ=255) acaTGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGaatggaaatgga > 1:450213/1‑251 (MQ=255) acaTGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGaatggaaatgga > 1:207061/1‑251 (MQ=255) acaTGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGaatggaaatgga > 1:843206/1‑251 (MQ=255) acaTGAGGTTGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGaatggaaatgga > 1:290863/1‑251 (MQ=255) gttGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGAtgtac < 1:277005/247‑3 (MQ=255) ttGTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCAt < 1:144450/250‑1 (MQ=255) gTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCa < 1:652590/248‑1 (MQ=255) gTTCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCAt > 1:321550/1‑249 (MQ=255) ttCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCt < 1:883240/250‑1 (MQ=255) tCCAAACGCAATTCAGCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTTAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCa < 1:333926/246‑1 (MQ=255) aaacgcaattcagCAGTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTaacgc < 1:437599/239‑4 (MQ=255) gTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAtta > 1:521795/1‑248 (MQ=255) gTATCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAtta > 1:401642/1‑248 (MQ=255) aTCTTCTAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATtacaa > 1:544612/1‑251 (MQ=255) cttctAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTaacgc < 1:595869/232‑4 (MQ=255) cttctAATGTGATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTacaaca > 1:489297/1‑251 (MQ=255) tgtgATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTaaa > 1:516466/1‑250 (MQ=255) gtgATGACACGTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACg > 1:418083/1‑251 (MQ=255) gTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCttttttt < 1:161846/169‑1 (MQ=255) gTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGAt < 1:49684/200‑1 (MQ=255) gTTCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATcg > 1:268674/1‑250 (MQ=255) tCGGTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATcggg < 1:761072/251‑4 (MQ=255) gTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGa < 1:765229/131‑1 (MQ=255) gTATGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAg > 1:235047/1‑251 (MQ=255) aTGGGAAATATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTc < 1:249121/251‑1 (MQ=255) aaaTATAATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGAt < 1:377932/188‑1 (MQ=255) tataATTAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTc > 1:2897/1‑250 (MQ=255) taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATtacaa > 1:571432/4‑214 (MQ=255) taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGt < 1:640523/234‑1 (MQ=255) taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCa > 1:697782/4‑250 (MQ=255) taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCa > 1:422294/4‑250 (MQ=255) taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCAc < 1:408684/248‑1 (MQ=255) taattAGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACAAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCa > 1:448071/4‑250 (MQ=255) taattAGATAGCGCATTAAGGAGAGCTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTaac < 1:429363/192‑2 (MQ=255) aGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAAttac < 1:731078/207‑4 (MQ=255) aGATAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATc < 1:50244/228‑1 (MQ=255) tAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGAc < 1:601913/251‑1 (MQ=255) tAGCGCATTAAGGAGAGTTGTTTTACCGGATCCTGTACCACCTGACACAATTATATTTACTCGAGATCTGGCAGCGATAATTAAAAAATTTGCCATATCGCGGGTCATAGAACCGAAATTTACAAGCTCTTGCAAGCTTTTTTTACTCTTACTGAACTTACGAATGGAAATGGATGTACCATCTAACGCAATCGGTGCAATTACAACATTTAAACGGCTACCATCGGGTAGTCGGGAGTCCACTAGTGGAc < 1:40588/251‑1 (MQ=255) || CTTGTAACATTTGGAATGCTTCTCCACCACGGCATTCGCCCACAATAATACGCTCAGGACGCATACGCAATGCATTTATTACTAAGTCTTGCATAGTAACTTCGCCTGTATGCTCAACGCCGGCTAAACGCGTTTCCAGGCGTACAACATGAGGCTGTTCCAAACGCAGCTCGGCAGTATCTTCTAGTGTGATGACACGTTCGGTATGGGAAATATAGTTAGATAGCGCATTAAGTAAGGTTGTTTTACCAGATCCTGTACCACCTGACACAATTATATTTACCCGGGATCTGGCAGCAATAATTAAGAAATTCGCCATTTCGCGAGTCATAGAACCAAAATTTACAAGCTCTTGCAATGTTTTTTTATTCTTACTGAATTTACGAATAGAAATGGATGTGCCATCTAATGCAATCGGTGCAATAACAACATTTAAACGGCTGCCATCAGGTAGTCGGGAGTCCACTAGTGGAC > 1/855729‑856202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |