Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 762,802 C→T intergenic (+25680/+57491) unknown → / ← unknown tRNA‑Asn‑GTT/tRNA‑Thr‑GGT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1762,8020CT100.0% 186.6 / NA 69intergenic (+25680/+57491)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Thr‑GGT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (30/39);  total (30/39)

ATTTGATGTGGCAGCACGTATTAATTTAACCGACCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTCTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCGGAGTTAATTAATCAACGTATCATTTGGGAT  >  1/762557‑763046
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
aTTTGATGTGGCAGCACGTATTAATTTAACCGACCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAAt                                                                                                                                                                                                                                                 <  1:798803/251‑1 (MQ=255)
  ttGATGTGGCAGCACGTATTAATTTAACCGACCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATAc                                                                                                                                                                                                                                               <  1:463035/251‑1 (MQ=255)
    gATGTGGCAGCACGTATTAATTTAACCGACCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATa                                                                                                                                                                                                                                                >  1:275749/1‑248 (MQ=255)
           cagcaCGTATTAATTTAACCGACCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAgg                                                                                                                                                                                                                                       <  1:59726/250‑1 (MQ=255)
           ataagaggcaaaaattaacccgccTGCAACTTAAAGGCAATTCCAATTGTTTCTTAACCTTCAACCAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGa                                                                                                                                                                                                                                      <  1:479113/229‑1 (MQ=255)
                cGTATTAATTTAACCGACCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAAAAGGGGTTTGAAt                                                                                                                                                                                                                                                 >  1:20330/1‑235 (MQ=255)
                      aaTTTAACCGACCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGataaataa                                                                                                                                                                                                                           <  1:778809/251‑1 (MQ=255)
                      aaTTTAACCGACCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGataaataa                                                                                                                                                                                                                           <  1:378226/251‑1 (MQ=255)
                                aCCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCCCAAGGCGAGCTAAAACGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGa                                                                                                                                                                                                                  >  1:69328/1‑250 (MQ=255)
                                aCCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAAt                                                                                                                                                                                                                                                 <  1:390060/219‑1 (MQ=255)
                                aCCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGGGGTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGa                                                                                                                                                                                                                  >  1:306535/1‑250 (MQ=255)
                                       aCTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTACATCGTGAACAAACCCAAGCGGTAAAAAAACAGGGGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGaa                                                                                                                                                                                                           >  1:453482/1‑250 (MQ=255)
                                                  aTTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGGGTTTGAATACTGCAAAgg                                                                                                                                                                                                                                       >  1:584359/1‑211 (MQ=255)
                                                   ttCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGGGTTTGAATACTGCAAAGGAAAGATAAATAACGGCGAAGACATTGAACTTACGGAACttt                                                                                                                                                                                              >  1:578173/1‑251 (MQ=255)
                                                   ttCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGAGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAAAAGGTGTTTGAAt                                                                                                                                                                                                                                                 >  1:229499/1‑200 (MQ=255)
                                                            ttACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGGGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAg                                                                                                                                                                                      >  1:501341/1‑250 (MQ=255)
                                                               cTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTg                                                                                                                                                                                   >  1:277349/1‑250 (MQ=255)
                                                                   aCCTTCATCAAAGGGCGCGTCGGGCGCAAAGTCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACg                                                                                                                                                                                                     >  1:310030/1‑228 (MQ=255)
                                                                       tcatcaAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAAt                                                                                                                                                                                                                                                 <  1:263760/180‑1 (MQ=255)
                                                                        catcaAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAAc                                                                                                                                                                                                          <  1:320734/218‑1 (MQ=255)
                                                                         atcaAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGataaataa                                                                                                                                                                                                                           <  1:348918/200‑1 (MQ=255)
                                                                         atcaAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGGAAAAAAACAGGGGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTaaa                                                                                                                                                                        >  1:8749/1‑251 (MQ=255)
                                                                               gggCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTTAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACcaaca                                                                                                                                                                  >  1:193560/1‑251 (MQ=255)
                                                                                  cgcgTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGGGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCaacaac                                                                                                                                                                >  1:598793/1‑250 (MQ=255)
                                                                                           cgcAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGAc                                                                                                                                                                                                                                     <  1:833587/172‑1 (MQ=255)
                                                                                           cgcAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCg                                                                                                                                                       <  1:259622/250‑1 (MQ=255)
                                                                                               aaaTCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGataaataa                                                                                                                                                                                                                           <  1:831647/178‑1 (MQ=255)
                                                                                                     cgGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCa                                                                                                                                             <  1:867971/250‑1 (MQ=255)
                                                                                                                       ttCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAAt                                                                                                                                                                                                                                                 <  1:787350/132‑1 (MQ=255)
                                                                                                                             gTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCa                                                                                                                                             <  1:121917/226‑1 (MQ=255)
                                                                                                                                cGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGGGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCCGCGAGCTGCCGACTCTAAACcaac                                                                                                                                                                   >  1:597927/1‑201 (MQ=255)
                                                                                                                                  gaagaaGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAAcc                                                                                                                                                                      >  1:297466/1‑196 (MQ=255)
                                                                                                                                  gaagaaGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTc                                                                                                                                              >  1:206262/1‑220 (MQ=255)
                                                                                                                                  gaagaaGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGGAGAAAataa                                                                                                               >  1:278650/1‑250 (MQ=255)
                                                                                                                                    agaagGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGata                                                                                                                                                                                                                                >  1:848912/1‑136 (MQ=255)
                                                                                                                                               aCCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGGAGAAAAaataaccccgggttc                                                                                                   >  1:239677/1‑239 (MQ=255)
                                                                                                                                                cccGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGaaa                                                                                                                                                                                                          >  1:447172/1‑145 (MQ=255)
                                                                                                                                                 ccGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTcgcac                                                                                                <  1:636143/251‑1 (MQ=255)
                                                                                                                                                 ccGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTcgcac                                                                                                <  1:106324/251‑1 (MQ=255)
                                                                                                                                                           aaaaTCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAg                                                                                      <  1:855871/251‑1 (MQ=255)
                                                                                                                                                           aaaaTCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAg                                                                                      <  1:428004/251‑1 (MQ=255)
                                                                                                                                                            aaaTCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGt                                                                                     <  1:478399/251‑1 (MQ=255)
                                                                                                                                                            aaaTCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGt                                                                                     <  1:228001/251‑1 (MQ=255)
                                                                                                                                                                cAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCt                                                                                 <  1:25011/251‑1 (MQ=255)
                                                                                                                                                                  aTGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGataaataa                                                                                                                                                                                                                           <  1:536894/111‑1 (MQ=255)
                                                                                                                                                                  aTGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACgg                                                                                                                                                                                                                        <  1:565454/114‑1 (MQ=255)
                                                                                                                                                                          taCAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATtc                                                                       <  1:314208/251‑1 (MQ=255)
                                                                                                                                                                                    gagtgaTTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCg                                                             >  1:533034/1‑251 (MQ=255)
                                                                                                                                                                                    gagtgaTTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCg                                                             >  1:718108/1‑251 (MQ=255)
                                                                                                                                                                                     agtgaTTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCaaaa                                                                                                                                    >  1:733503/1‑179 (MQ=255)
                                                                                                                                                                                     agtgaTTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTc                                                               >  1:627541/1‑248 (MQ=255)
                                                                                                                                                                                     agtgaTTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCgg                                                            >  1:621758/1‑251 (MQ=255)
                                                                                                                                                                                      gtgaTTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAAcc                                                                                                                                                               <  1:136239/151‑1 (MQ=255)
                                                                                                                                                                                                 gcACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAAt                                                                                                                                                                                                                                                 <  1:798279/58‑1 (MQ=255)
                                                                                                                                                                                                 gcACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCCCACGGAAATCTCCGGTTCCGGCAAAGGAGTGa                                                 >  1:675553/1‑250 (MQ=255)
                                                                                                                                                                                                      aGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATc                                            >  1:181944/1‑250 (MQ=255)
                                                                                                                                                                                                          gAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATAc                                                                                                             <  1:408098/181‑1 (MQ=255)
                                                                                                                                                                                                            gTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACgg                                                                                                                              <  1:382899/162‑1 (MQ=255)
                                                                                                                                                                                                                  tCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCgg                               <  1:420970/251‑1 (MQ=255)
                                                                                                                                                                                                                       aaCAAACCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCGGAGtta                          <  1:668899/251‑1 (MQ=255)
                                                                                                                                                                                                                           aaCCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCCTCAGTTTTGATGCGGAGttaatta                      >  1:368780/1‑251 (MQ=255)
                                                                                                                                                                                                                           aaCCCAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCGGAGttaatt                       <  1:225300/250‑1 (MQ=255)
                                                                                                                                                                                                                              ccAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGCCAGATAAATAACGGCGAAGACATTGAACTTACGGATCTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCGGAGTTAATTAATc                   <  1:720645/251‑1 (MQ=255)
                                                                                                                                                                                                                              ccAAGCGGTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCGGAGTTAATTAATc                   <  1:95076/251‑1 (MQ=255)
                                                                                                                                                                                                                                     gTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATAccgccg                                                                                                        <  1:261615/159‑1 (MQ=255)
                                                                                                                                                                                                                                     gTAAAAAAACAGGTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCGGAGTTAATTAATCAACGTAt            >  1:844665/1‑251 (MQ=255)
                                                                                                                                                                                                                                                ggTGTTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGAcc                                               <  1:708970/205‑1 (MQ=255)
                                                                                                                                                                                                                                                 gtgtTTGAATCCTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCGGAGTTAATTAATCAACGTATCATTTGGGAt  <  1:487813/249‑1 (MQ=255)
                                                                                                                                                                                                                                                 gtgtTTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCGGAGTTAATTAATCAACGTATCATTTGGGa   <  1:67629/248‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
ATTTGATGTGGCAGCACGTATTAATTTAACCGACCTGCAACTTAATGCCAATTCCAATCGTTACTTAACCTTCATCAAAGGGCGCGTCGGGCGCAAAATCGCGGACTTCTTTATGGATTTTCTGGGTGCGGAAGAAGGGCTTAACCCGCAAGTACAAAATCAATGTTTATTACAGGCGGTGAGTGATTACTGCGCACAAGGCGAGTTAAATCGTGAACAAACCCAAGCGGTAAAAAAACAGGTGTCTGAATACTGCAAAGGACAGATAAATAACGGCGAAGACATTGAACTTACGGAACTTTCCGGCGAGCTGCCGACTCTAAACCAACAACCTTTTGCCGAGTTTACTCAAGCGCAAAATTACGGCTTGGAAGAAAATATACCGCCGGTTCGCACCGCACTTAAGTCGCTCACGAAATTCTCCGGTTCCGGCAAAGGAGTGACCATCAGTTTTGATGCGGAGTTAATTAATCAACGTATCATTTGGGAT  >  1/762557‑763046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑