Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 762,009 T→C intergenic (+24887/+58284) unknown → / ← unknown tRNA‑Asn‑GTT/tRNA‑Thr‑GGT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1762,0090TC100.0% 191.1 / NA 68intergenic (+24887/+58284)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Thr‑GGT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (29/39);  total (29/39)

TCGTATTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGTATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACAAGTACTGACAATCACGCCGGAAGTAGAACAAATGATGT  >  1/761765‑762243
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                          
tcgtATTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCatatat                                                                                                                                                                                                                                      <  1:872084/251‑1 (MQ=255)
tcgtATTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCatatat                                                                                                                                                                                                                                      <  1:281796/251‑1 (MQ=255)
  gtATTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGAGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTa                                                                                                                                                                                                                                    >  1:581443/1‑251 (MQ=255)
   tATTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTaa                                                                                                                                                                                                                                   >  1:410480/1‑251 (MQ=255)
   tATTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTaa                                                                                                                                                                                                                                   >  1:261346/1‑251 (MQ=255)
   tATTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTaa                                                                                                                                                                                                                                   >  1:199037/1‑251 (MQ=255)
    aTTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAAc                                                                                                                                                                                                                                  <  1:235179/251‑1 (MQ=255)
    aTTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAAc                                                                                                                                                                                                                                  <  1:631875/251‑1 (MQ=255)
                           cGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACa                                                                                                                                                                                                           <  1:770313/251‑1 (MQ=255)
                            ggAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACat                                                                                                                                                                                                          >  1:531007/1‑251 (MQ=255)
                             gagaAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACat                                                                                                                                                                                                          <  1:857244/250‑1 (MQ=255)
                                        tGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATc                                                                                                                                                                                                                 >  1:196255/1‑232 (MQ=255)
                                        tGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGtt                                                                                                                                                                                              >  1:506865/1‑251 (MQ=255)
                                                    tCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGTTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAg                                                                                                                                                                                   <  1:427866/250‑1 (MQ=255)
                                                    tCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAg                                                                                                                                                                                   <  1:825337/250‑1 (MQ=255)
                                                                    acacTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTTGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGAc                                                                                                                                                                   <  1:254034/250‑1 (MQ=255)
                                                                    acacTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGAc                                                                                                                                                                   <  1:837167/250‑1 (MQ=255)
                                                                    acacTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGAc                                                                                                                                                                   <  1:288483/250‑1 (MQ=255)
                                                                              gCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGAc                                                                                                                                                                   >  1:259537/1‑240 (MQ=255)
                                                                                 gTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAgg                                                                                                                                                     >  1:271229/1‑251 (MQ=255)
                                                                                 gTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAgg                                                                                                                                                     >  1:465950/1‑251 (MQ=255)
                                                                                             tCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATg                                                                                                                                          <  1:764403/250‑1 (MQ=255)
                                                                                              cATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATc                                                                                                                                                                                                                 <  1:94489/178‑1 (MQ=255)
                                                                                               atatTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAg                                                                                                                                        >  1:408569/1‑250 (MQ=255)
                                                                                                     ccTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTAc                                                                                                                                  <  1:647318/250‑1 (MQ=255)
                                                                                                     ccTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTAc                                                                                                                                  <  1:387643/250‑1 (MQ=255)
                                                                                                      cTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAg                                                                                                                                <  1:331847/251‑1 (MQ=255)
                                                                                                       tAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGAc                                                                                                                                                                   <  1:143600/215‑1 (MQ=255)
                                                                                                              aTTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACaa                                                                                                                        >  1:204454/1‑251 (MQ=255)
                                                                                                                  aGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAAc                                                                                                                                                                                                            >  1:793737/1‑163 (MQ=255)
                                                                                                                   ggATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGcatata                                                                                                                                                                                                                                       <  1:763053/135‑1 (MQ=255)
                                                                                                                    gATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACat                                                                                                                                                                                                          <  1:857988/163‑1 (MQ=255)
                                                                                                                    gATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAattatt                                                                                                                  >  1:185749/1‑251 (MQ=255)
                                                                                                                                  cgcTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTAt                                                                                                    <  1:54898/251‑1 (MQ=255)
                                                                                                                                         tgtTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATc                                                                                              <  1:623941/250‑1 (MQ=255)
                                                                                                                                              ttCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCa                                                                                        >  1:524440/1‑251 (MQ=255)
                                                                                                                                                      cTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGTGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAaaccgaa                                                                                 >  1:398899/1‑250 (MQ=255)
                                                                                                                                                      cTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTaa                                                                                                                                                       <  1:46395/180‑1 (MQ=255)
                                                                                                                                                      cTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAaaccgaa                                                                                 >  1:36084/1‑250 (MQ=255)
                                                                                                                                                        gCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCatatat                                                                                                                                                                                                                                      >  1:486047/1‑99 (MQ=255)
                                                                                                                                                        gCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTataat                                                                                                                                                                       >  1:586633/1‑162 (MQ=255)
                                                                                                                                                           aTCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGAc                                                                                                                                                                   >  1:542016/1‑163 (MQ=255)
                                                                                                                                                                   gTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGtg                                                                     >  1:260848/1‑249 (MQ=255)
                                                                                                                                                                      gagaATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGAc                                                                                                                                                                   <  1:296919/152‑1 (MQ=255)
                                                                                                                                                                             tCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAATCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAAt                                                         <  1:444502/251‑1 (MQ=255)
                                                                                                                                                                               aTCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTataa                                                                                                                                                                        >  1:379860/1‑138 (MQ=255)
                                                                                                                                                                               aTCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAg                                                       <  1:255055/251‑1 (MQ=255)
                                                                                                                                                                                   aTTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTaa                                                                                                                                                       >  1:143376/1‑151 (MQ=255)
                                                                                                                                                                                   aTTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTg                                                   >  1:366333/1‑251 (MQ=255)
                                                                                                                                                                                      tGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAAc                                                                                                                                                                                                                                  >  1:891316/1‑73 (MQ=255)
                                                                                                                                                                                      tGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGAc                                                                                                                                                                   >  1:818784/1‑136 (MQ=255)
                                                                                                                                                                                           aTCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAg                                                       >  1:39383/1‑239 (MQ=255)
                                                                                                                                                                                           aTCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTaa                                           >  1:146007/1‑251 (MQ=255)
                                                                                                                                                                                             cTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTAc                                                                                                                                  <  1:408841/162‑1 (MQ=255)
                                                                                                                                                                                              ttGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACa                                        <  1:532917/251‑1 (MQ=255)
                                                                                                                                                                                              ttGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACa                                        <  1:901611/251‑1 (MQ=255)
                                                                                                                                                                                                 atatTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAAt                                                                                                                                                                                                                           <  1:510743/69‑1 (MQ=255)
                                                                                                                                                                                                     tttGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACAAGTACTg                                 <  1:791589/251‑1 (MQ=255)
                                                                                                                                                                                                       tgattgaATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACAAGTACTGAc                               <  1:627289/251‑1 (MQ=255)
                                                                                                                                                                                                             aaTTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACAAGTACTGACAATCAc                         <  1:846363/251‑1 (MQ=255)
                                                                                                                                                                                                              aTTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATtc                                                                                                                 <  1:725637/162‑1 (MQ=255)
                                                                                                                                                                                                                 gCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAAt                                                         <  1:890397/215‑1 (MQ=255)
                                                                                                                                                                                                                 gCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAg                                                       <  1:164153/217‑1 (MQ=255)
                                                                                                                                                                                                                     tGTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACAAGTACTGACAATCACGCCGGAAg                 <  1:742855/251‑1 (MQ=255)
                                                                                                                                                                                                                      gTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATAtt                                                                                                                                                                                                                                     <  1:187969/38‑1 (MQ=255)
                                                                                                                                                                                                                      gTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAaaccgaac                                                                                <  1:27400/187‑1 (MQ=255)
                                                                                                                                                                                                                      gTTTGGTTGGTCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACAAGTACTGACAATCACGCCGGAAGt                >  1:596894/1‑251 (MQ=255)
                                                                                                                                                                                                                         tggttggtCTGCCGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAAt                                                         <  1:315761/207‑1 (MQ=255)
                                                                                                                                                                                                                                    ccGATTTAAAATGCCGCATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACAAGTACTGACAATCACGCCGGAAGTAGAACAAATGATGt  <  1:587969/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                          
TCGTATTAAGAGAGTTCAGCAAAGCGTCGGAGAAGGCTTTTGCCAGCACTTGTCGTTGCTGTTTTCCGACACTGCCGAGCAGTAAATTGGTGGTCATATTGCCTAACACGATTAAGGATAAATCCAGCGGCGCTTGGTGTTTTTCCAGCACTGCAATCATGTCGTTGAGAATTTCATCTATTTGTTTATCTTGATATTTTGATTGAATTGCCATGTTTGGTTGGTCTGCCGATTTAAAATGCCGTATATATTAACCGATAATTGCGCTAATCCTAACATATTTTGTTAGTTCCGGTAAAAAGTGCGGTTATAATAGACAGAGTTTTTTAAGGACAATTTCATGAGCATTACAGTTAAACAAATTATTCTCCACCAAATTATCAAATCCAATCAAACCGAACCGAAAAGCGTGCTGCAACTGAATAGCGTGCTACGTAAACAAGTACTGACAATCACGCCGGAAGTAGAACAAATGATGT  >  1/761765‑762243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑