Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 754,910 T→C intergenic (+17788/+65383) unknown → / ← unknown tRNA‑Asn‑GTT/tRNA‑Thr‑GGT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1754,9100TC100.0% 199.5 / NA 72intergenic (+17788/+65383)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Thr‑GGT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (28/44);  total (28/44)

CCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAATCTTATCCGTAATGGAATTAACATCCGATTTCAGTAATTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCGGAATATTTCTCGCCGAACAACGCCATCGCACCTTTCG  >  1/754669‑755154
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                    
ccGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCt                                                                                                                                                                                                                                              <  1:267319/250‑1 (MQ=255)
    aCCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGAt                                                                                                                                                                                                                                         >  1:191963/1‑251 (MQ=255)
           tGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTtaataa                                                                                                                                                                                                                                  <  1:623406/251‑1 (MQ=255)
               ttttCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGAt                                                                                                                                                                                                                              <  1:609645/251‑1 (MQ=255)
                     ggCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTgg                                                                                                                                                                                                                        >  1:469889/1‑251 (MQ=255)
                         aTCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTtaataa                                                                                                                                                                                                                                  >  1:233828/1‑237 (MQ=255)
                             aCCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTaa                                                                                                                                                                                                                <  1:842009/251‑1 (MQ=255)
                               cATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAAcc                                                                                                                                                                                                              <  1:479209/251‑1 (MQ=255)
                                    aaCGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGt                                                                                                                                                                                                                       <  1:787268/237‑1 (MQ=255)
                                     aCGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGa                                                                                                                                                                                                        >  1:666745/1‑251 (MQ=255)
                                        tAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTtaataa                                                                                                                                                                                                                                  <  1:410962/222‑1 (MQ=255)
                                                 cGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGGATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCAc                                                                                                                                                                                            <  1:33940/251‑1 (MQ=255)
                                                   cTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAg                                                                                                                                                                                                  <  1:350212/243‑1 (MQ=255)
                                                   cTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCg                                                                                                                                                                                          >  1:51237/1‑251 (MQ=255)
                                                         tACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGGAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAGCCATTCGATTGCAGTTTCACCGGTAATc                                                                                                                                                                                    <  1:746062/251‑1 (MQ=255)
                                                            cATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGt                                                                                                                                                                                                                       <  1:303300/213‑1 (MQ=255)
                                                            cATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGc                                                                                                                                                                                  >  1:509939/1‑250 (MQ=255)
                                                             aTCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGc                                                                                                                                                                                  >  1:867213/1‑249 (MQ=255)
                                                                      ttgCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATacgac                                                                                                                                                                       <  1:171706/251‑1 (MQ=255)
                                                                           cAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATac                                                                                                                                                                          <  1:324498/243‑1 (MQ=255)
                                                                             aTGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGAAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAAtgc                                                                                                                                                                 >  1:350966/1‑250 (MQ=255)
                                                                                    aaaCACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTTTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTgccgcc                                                                                                                                                         <  1:451614/251‑1 (MQ=255)
                                                                                       cacCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCa                                                                                                                                                        >  1:37596/1‑249 (MQ=255)
                                                                                         ccATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGc                                                                                                                                                    <  1:833957/251‑1 (MQ=255)
                                                                                           aTTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCg                                                                                                                                                  <  1:688713/251‑1 (MQ=255)
                                                                                                 tttCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCg                                                                                                                                            <  1:154792/251‑1 (MQ=255)
                                                                                                  ttCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGt                                                                                                                                           >  1:396857/1‑251 (MQ=255)
                                                                                                      ccGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTa                                                                                                                                         >  1:314855/1‑249 (MQ=255)
                                                                                                        gCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTATTGTTTGTCGCCCTTTTTCAACTTTCTTAATTTTATCTTTCAACAGAGAAACCTTATCCGAAAGGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGTTTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGAAATCGCCTCAATACGACGAATGCCTGCCGCCACTCCCGTTTCCGTTACTAt                                                                                                                                     >  1:574235/1‑251 (MQ=255)
                                                                                                                      gTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGa                                                                                                                       >  1:670506/1‑251 (MQ=255)
                                                                                                                         aTTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGt                                                                                                                    <  1:399947/251‑1 (MQ=255)
                                                                                                                             ccGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAAc                                                                                                                              >  1:773747/1‑237 (MQ=255)
                                                                                                                              cGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCg                                                                                                               <  1:246682/251‑1 (MQ=255)
                                                                                                                               ggCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCgg                                                                                                              >  1:153561/1‑251 (MQ=255)
                                                                                                                                  ttGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTa                                                                                                            >  1:228341/1‑250 (MQ=255)
                                                                                                                                     cagcgcagcTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGt                                                                                                         <  1:176130/250‑1 (MQ=255)
                                                                                                                                                   cTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAAc                                                                                                                              >  1:647786/1‑215 (MQ=255)
                                                                                                                                                     tttAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCccacc                                                                                        <  1:766407/251‑1 (MQ=255)
                                                                                                                                                     tttAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCccacc                                                                                        <  1:134406/251‑1 (MQ=255)
                                                                                                                                                        aaTGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACcaca                                                                                     >  1:218069/1‑251 (MQ=255)
                                                                                                                                                         aTGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTCCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACAt                                                                                    <  1:450945/251‑1 (MQ=255)
                                                                                                                                                            tttGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGt                                                                                                                    <  1:14172/216‑1 (MQ=255)
                                                                                                                                                             ttGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGAt                                                                                                                                                                                                                              >  1:492452/1‑109 (MQ=255)
                                                                                                                                                              tGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTc                                                                               <  1:539031/251‑1 (MQ=255)
                                                                                                                                                              tGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTc                                                                               <  1:847847/251‑1 (MQ=255)
                                                                                                                                                                   ctctTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATgg                                                                          <  1:19069/251‑1 (MQ=255)
                                                                                                                                                                                ttCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGAt                                                                                                                                                                                                                                         <  1:590576/79‑1 (MQ=255)
                                                                                                                                                                                ttCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAAtgcctg                                                                                                                                                              <  1:707785/154‑1 (MQ=255)
                                                                                                                                                                                ttCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTAt                                                                                                                                     <  1:130614/179‑1 (MQ=255)
                                                                                                                                                                                ttCTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAAc                                                                                                                              >  1:89647/1‑186 (MQ=255)
                                                                                                                                                                                  cTTAAATTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCAtag                                                           <  1:114479/251‑1 (MQ=255)
                                                                                                                                                                                     aaaTTTATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAAc                                                                                                                              <  1:527060/181‑1 (MQ=255)
                                                                                                                                                                                          tATCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTAcg                                                   <  1:520729/251‑1 (MQ=255)
                                                                                                                                                                                            tCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGt                                                                                                                    <  1:820480/184‑1 (MQ=255)
                                                                                                                                                                                            tCTTGCAACAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCAtag                                                           <  1:247725/241‑1 (MQ=255)
                                                                                                                                                                                                  aaCAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTg                                           <  1:236098/251‑1 (MQ=255)
                                                                                                                                                                                                    cAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTtaataa                                                                                                                                                                                                                                  >  1:743977/1‑66 (MQ=255)
                                                                                                                                                                                                    cAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCAt                                                                                                  >  1:836511/1‑194 (MQ=255)
                                                                                                                                                                                                    cAGAGAAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACAt                                                                                    <  1:376625/208‑1 (MQ=255)
                                                                                                                                                                                                      gagaAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCg                                       >  1:34293/1‑251 (MQ=255)
                                                                                                                                                                                                       agaAACCTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATc                                        <  1:532973/249‑1 (MQ=255)
                                                                                                                                                                                                         aaaccTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCgg                                      <  1:266177/245‑1 (MQ=255)
                                                                                                                                                                                                         aaaccTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCgg                                      <  1:762805/245‑1 (MQ=255)
                                                                                                                                                                                                           accTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCGGAata                                  >  1:174665/3‑251 (MQ=255)
                                                                                                                                                                                                            ccTTATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCAtagtt                                                         <  1:56339/226‑1 (MQ=255)
                                                                                                                                                                                                               tATCCGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCGGAATATTtc                              <  1:35832/251‑1 (MQ=255)
                                                                                                                                                                                                                  ccGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCGCCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTa                                                                                                                                      <  1:765616/144‑1 (MQ=255)
                                                                                                                                                                                                                  ccGTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCGGAATATTTCTCg                           >  1:665031/1‑251 (MQ=255)
                                                                                                                                                                                                                    gTAATGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGt                                                                                                                    <  1:874416/160‑1 (MQ=255)
                                                                                                                                                                                                                        tGGAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTCTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCGGAATATTTCTCGCCGaa                      >  1:857054/1‑250 (MQ=255)
                                                                                                                                                                                                                         ggAATTAACATCCGATTTCAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCGGAATATTTCTCGCCGaaca                    >  1:785362/1‑251 (MQ=255)
                                                                                                                                                                                                                                           cAGTAACTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATCATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCGGAATATTTCTCGCCGAACAACGCCATCGCACCTTTCg  >  1:454114/1‑251 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                    
CCGAACCTAATTGATTTTTCAGGCTATCGACCATTGAACGTAAAGACTTCGCTTCAATACCATCAAGTTGTTGCGCAATGACAGAAACACCATTAATTTTCACCGCACTTTGTGCCAGGTCATTACCGGCTTGCAGCGCAGCTTTTTCTTTTAATGTTTGTAGCTCTTTTTCAACTTTCTTAAATTTATCTTGCAACAGAGAAATCTTATCCGTAATGGAATTAACATCCGATTTCAGTAATTCGGCGCTTTGATTTAATAAAGATTGTTGGTTTTGTAACCATTCGATTGCAGTTTCACCGGTAATCGCCTCAATACGACGAATGCCTGCCGCCACTGCCGTTTCCGTTACTATTTTAAACAGCCCGATGTCGCCGGTACGTTTCGCATGGATCCCACCACATAATTCAATGGAAAAATCTCCCATAGTTAGTACGCGTACTTGATCGGAATATTTCTCGCCGAACAACGCCATCGCACCTTTCG  >  1/754669‑755154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑