| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 698,631 | A→G | intergenic (+201078/‑712) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 698,631 | 0 | A | G | 100.0% | 227.6 / NA | 83 | intergenic (+201078/‑712) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (52/31); total (52/31) | |||||||||||
TGGCATCCCTGATAGCGCAAAATGGATCCTGACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCACATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACAGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCG > 1/698390‑698871 | tgGCATCCCTGATAGCGCAAAATGGATCCTGACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATtattat < 1:719249/251‑1 (MQ=255) gCATCCCTGATAGCGCAAAATGGATCCTGACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCg > 1:327295/1‑251 (MQ=255) aTCCCTGATAGCGCAAAATGGATCCTGACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGa > 1:58700/1‑251 (MQ=255) aTAGCGCAAAATGGATCCTGACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGTATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGa < 1:455430/251‑1 (MQ=255) aaaTGGATCCTGACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTa > 1:152447/1‑250 (MQ=255) tCCTGACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGa > 1:839125/1‑229 (MQ=255) cTGACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTc < 1:641918/251‑1 (MQ=255) gACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAGTGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCgg < 1:535865/224‑1 (MQ=255) ggTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAAc < 1:643171/244‑1 (MQ=255) tCGTTTGGAAAATTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGc < 1:256300/250‑1 (MQ=255) cGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACg > 1:172625/1‑248 (MQ=255) ccTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCa > 1:750597/1‑250 (MQ=255) cTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACt < 1:432978/251‑1 (MQ=255) tATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACttt > 1:634746/1‑251 (MQ=255) tATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACttt > 1:489726/1‑251 (MQ=255) ggTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATaa > 1:197412/1‑221 (MQ=255) gTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATaa > 1:256902/1‑220 (MQ=255) ttattCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGAc > 1:391473/1‑195 (MQ=255) attCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGGCATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCaaaa > 1:222791/1‑251 (MQ=255) attCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCaaaa > 1:800449/1‑251 (MQ=255) cTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGacca > 1:94140/1‑251 (MQ=255) cTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATaa > 1:139251/1‑195 (MQ=255) tGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAGAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCtttttt < 1:584674/251‑1 (MQ=255) ccTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAacac < 1:529184/208‑1 (MQ=255) cacTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGacc < 1:537846/221‑1 (MQ=255) cacTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGgcg > 1:686994/1‑251 (MQ=255) cacTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGgcg > 1:45507/1‑251 (MQ=255) ttttATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGc > 1:635207/1‑180 (MQ=255) tttATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGacc < 1:217167/214‑1 (MQ=255) tttATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAg < 1:80289/251‑1 (MQ=255) atatTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGc < 1:214439/164‑1 (MQ=255) atTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACgg < 1:156573/145‑1 (MQ=255) atTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGa > 1:799365/1‑250 (MQ=255) cAACTCATGATGGACAGACCAAGAAAATAGCCGACGATATTGCCGAACTAATCACCGCCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAg < 1:456619/251‑1 (MQ=255) aCTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGAcgg < 1:580038/232‑3 (MQ=255) aCTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAgg > 1:529489/1‑250 (MQ=255) cTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCa > 1:797237/1‑251 (MQ=255) cATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATtattat > 1:430060/1‑116 (MQ=255) cATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCaa > 1:709559/1‑250 (MQ=255) cATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCaa > 1:333971/1‑250 (MQ=255) atgatgGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGAc < 1:402591/226‑1 (MQ=255) atgatgGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACg > 1:515132/1‑251 (MQ=255) atgatgGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACg > 1:527583/1‑251 (MQ=255) atgatgGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACg > 1:312450/1‑251 (MQ=255) ggACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAacac < 1:294715/171‑1 (MQ=255) gACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTtat > 1:681004/1‑148 (MQ=255) gACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAAACGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGa > 1:626985/1‑251 (MQ=255) aCCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGaaa < 1:300153/247‑1 (MQ=255) aaGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGt < 1:201662/251‑1 (MQ=255) gAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGttt > 1:819207/1‑251 (MQ=255) gAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGttt > 1:651837/1‑251 (MQ=255) aaTAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTAtg < 1:859612/251‑1 (MQ=255) tAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATaa > 1:165086/1‑127 (MQ=255) tAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTAtgtg < 1:132923/251‑1 (MQ=255) cGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTa > 1:195031/1‑251 (MQ=255) cTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGcc > 1:383868/1‑225 (MQ=255) cTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAAt > 1:316537/1‑251 (MQ=255) atatTGCCGAACTGATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGAc < 1:722729/108‑1 (MQ=255) ttGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTg > 1:706681/1‑251 (MQ=255) ttGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTg > 1:510192/1‑251 (MQ=255) aCTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGaaa < 1:464555/218‑1 (MQ=255) aCTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTa > 1:13712/1‑251 (MQ=255) cTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTAt > 1:559756/1‑251 (MQ=255) aaTCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAAcc < 1:592532/179‑1 (MQ=255) aaTCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCa > 1:360429/1‑251 (MQ=255) tCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACt < 1:38910/251‑1 (MQ=255) ccaccaATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAg > 1:243454/1‑197 (MQ=255) ccaccaATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTgg > 1:510876/1‑251 (MQ=255) ccaccaATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTgg > 1:804714/1‑251 (MQ=255) accaATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTAtg < 1:296622/220‑1 (MQ=255) ccaATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAAc > 1:385493/1‑99 (MQ=255) ccaATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGaa > 1:491471/1‑119 (MQ=255) ccaATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACttt < 1:415824/135‑1 (MQ=255) ccaATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCAc > 1:732862/1‑244 (MQ=255) ccaATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTGGCaa > 1:501985/1‑251 (MQ=255) aaaTCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACg < 1:545643/195‑1 (MQ=255) aaaTCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAAtt > 1:841167/1‑215 (MQ=255) aCGCAGAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAAtt < 1:411402/205‑1 (MQ=255) gAAGTGAATTTTGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTg > 1:183359/1‑250 (MQ=255) tGCCGATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATc < 1:679485/251‑1 (MQ=255) gATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATcc > 1:44257/1‑248 (MQ=255) gATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCcgcg > 1:612614/1‑251 (MQ=255) gATTACGAGCGCATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACGGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCcgcg > 1:593956/1‑251 (MQ=255) | TGGCATCCCTGATAGCGCAAAATGGATCCTGACCTTAGCCATGGTTTGCGGTCGTTTGGAAATTTTCTCCTTATTGGTATTATTCACTCCTGCATTTTGGAAATCCTAATGAAAACACTTATTTTATATTCAACTCATGATGGACAGACCAAGAAAATAGCCGACTATATTGCCGAACTAATCACCACCAATGTGGAGGTGAAATCGATTAACGCAGAAGTGAATTTTGCCGATTACGAGCACATTATTATCGGAGCTTCGATCCGCTACGGACATTTCAATAAACAGCTTTATAAAACGCTGGAAAAACACACCGCACTTTTGAATCAAAAGACCACCGCCTTTTTTGGCGTGAACCTGACAGCGCGAAAAGCCGACAAGGCAACGCCTGAAACGAATGTTTATGTGCGTAAATTTTTGCAACGTATCACTTGGCAACCGACGATCTCCGCGGTGTTTGCCGGTGCATTGCTTTATCCGCG > 1/698390‑698871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |