Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 675,833 T→C intergenic (+178280/‑23510) unknown → / → unknown tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1675,8330TC100.0% 199.8 / NA 72intergenic (+178280/‑23510)unknown/unknowntRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (35/37);  total (35/37)

TTTTTCAAGGTGCCGGCGTCTTTACCGCCGAATGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCATGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAATTTCTCATGCCCGTTGCCCATGGCGACGCCGACACCCACG  >  1/675597‑676076
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                   
tttttCAAGGTGCCGGCGTCTTTACCGCCGAATGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGc                                                                                                                                                                                                                                           >  1:782575/1‑247 (MQ=255)
tttttCAAGGTGCCGGCGTCTTTACCGCCGAATGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGt                                                                                                                                                                                                                                       <  1:521495/251‑1 (MQ=255)
  tttCAAGGTGCCGGCGTCTTTACCGCCGAATGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCATAAAAGCAAGTAt                                                                                                                                                                                                                                     <  1:78309/251‑1 (MQ=255)
         gTGCCGGCGTCTTTACCGCCGAATGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCg                                                                                                                                                                                                                               <  1:769900/250‑1 (MQ=255)
         gTGCCGGCGTCTTTACCGCCGAATGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCg                                                                                                                                                                                                                               <  1:770455/250‑1 (MQ=255)
         gTGCCGGCGTCTTTACCGCCGAATGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATGCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTAttt                                                                                                                                                                                                                                   <  1:437831/246‑1 (MQ=255)
                             gAATGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTaaaaa                                                                                                                                                                                                          >  1:615170/1‑251 (MQ=255)
                               aTGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAaat                                                                                                                                                                                                        <  1:194904/251‑1 (MQ=255)
                                                 cTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACca                                                                                                                                                                                       >  1:824864/1‑250 (MQ=255)
                                                   gCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACcaca                                                                                                                                                                                     >  1:742397/1‑250 (MQ=255)
                                                   gCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACcaca                                                                                                                                                                                     >  1:682061/1‑250 (MQ=255)
                                                    cTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACcaca                                                                                                                                                                                     >  1:288651/1‑249 (MQ=255)
                                                            gTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCGTAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGc                                                                                                                                                                                                                   >  1:694152/1‑211 (MQ=255)
                                                            gTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTaaa                                                                                                                                                                           >  1:858149/1‑251 (MQ=255)
                                                            gTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTaaa                                                                                                                                                                           >  1:2107/1‑251 (MQ=255)
                                                             tGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTaaa                                                                                                                                                                           <  1:185596/250‑1 (MQ=255)
                                                             tGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTaaa                                                                                                                                                                           <  1:876885/250‑1 (MQ=255)
                                                               gTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATg                                                                                                                                                                         <  1:509495/250‑1 (MQ=255)
                                                               gTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATg                                                                                                                                                                         >  1:517470/1‑250 (MQ=255)
                                                                      agaTCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCAtt                                                                                                                                                                 >  1:107592/1‑251 (MQ=255)
                                                                           ggATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTtcat                                                                                                                                                            >  1:155604/1‑251 (MQ=255)
                                                                            gATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGc                                                                                                                                                                                                                                           <  1:186527/171‑1 (MQ=255)
                                                                                 atatTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGt                                                                                                                                                      <  1:220679/251‑1 (MQ=255)
                                                                                 atatTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGt                                                                                                                                                      <  1:222181/251‑1 (MQ=255)
                                                                                 atatTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGt                                                                                                                                                      <  1:861590/251‑1 (MQ=255)
                                                                                             tCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGAt                                                                                                                                          <  1:419021/251‑1 (MQ=255)
                                                                                                    ccTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAg                                                                                                                                   <  1:396007/251‑1 (MQ=255)
                                                                                                       gctgcATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAgg                                                                                                                                  >  1:712343/1‑249 (MQ=255)
                                                                                                       gctgcATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGc                                                                                                                                 <  1:364334/250‑1 (MQ=255)
                                                                                                            aTACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTaatc                                                                                                                           <  1:557133/251‑1 (MQ=255)
                                                                                                              aCGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTaatcaa                                                                                                                         <  1:109769/251‑1 (MQ=255)
                                                                                                                 aTCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGt                                                                                                                                                      >  1:483885/1‑219 (MQ=255)
                                                                                                                 aTCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTaatcaatc                                                                                                                       <  1:833046/250‑1 (MQ=255)
                                                                                                                   ccATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGa                                                                                                                                           >  1:788469/1‑228 (MQ=255)
                                                                                                                    cATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAg                                                                                                                                   <  1:554051/235‑1 (MQ=255)
                                                                                                                     aTTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAAccc                                                                                                                  <  1:753322/251‑1 (MQ=255)
                                                                                                                                aCCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGc                                                                                                                                                                                                                                           <  1:341918/119‑1 (MQ=255)
                                                                                                                                aCCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCa                                                                                                       >  1:210631/1‑251 (MQ=255)
                                                                                                                                  ccaccaTTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGAt                                                                                                                                          >  1:337169/1‑214 (MQ=255)
                                                                                                                                          ccGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATa                                                                                             <  1:212199/251‑1 (MQ=255)
                                                                                                                                                    cGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCt                                                                                   <  1:40977/251‑1 (MQ=255)
                                                                                                                                                     gATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGc                                                                                                                                 <  1:289312/204‑1 (MQ=255)
                                                                                                                                                     gATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCtt                                                                                  >  1:725991/1‑251 (MQ=255)
                                                                                                                                                            ccAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCt                                                                                   >  1:274524/1‑243 (MQ=255)
                                                                                                                                                               aCGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAgg                                                                        <  1:674420/251‑1 (MQ=255)
                                                                                                                                                                    tttCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTaaa                                                                                                                                                                           >  1:443388/1‑147 (MQ=255)
                                                                                                                                                                    tttCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCt                                                                                                             <  1:889143/209‑1 (MQ=255)
                                                                                                                                                                           aGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATg                                                            >  1:116420/1‑251 (MQ=255)
                                                                                                                                                                                    ttCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAg                                                                                                                                                                                                                                            >  1:479623/1‑66 (MQ=255)
                                                                                                                                                                                    ttCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGAt                                                          <  1:818334/244‑1 (MQ=255)
                                                                                                                                                                                    ttCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGAt                                                   >  1:288094/1‑251 (MQ=255)
                                                                                                                                                                                        aGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATgg                                                 >  1:649413/1‑249 (MQ=255)
                                                                                                                                                                                         gATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACtttttt                                                                                                                                                                              >  1:43181/1‑123 (MQ=255)
                                                                                                                                                                                              gaTTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTaatc                                                                                                                           >  1:464731/1‑169 (MQ=255)
                                                                                                                                                                                              gaTTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAAt                                         >  1:585907/1‑251 (MQ=255)
                                                                                                                                                                                               aTTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAAt                                         <  1:496525/250‑1 (MQ=255)
                                                                                                                                                                                                  gAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAAt                                         <  1:262088/247‑1 (MQ=255)
                                                                                                                                                                                                        aTGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAATTTCTCATGcc                               <  1:871329/251‑1 (MQ=255)
                                                                                                                                                                                                          gttgtGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAAt                                         >  1:673868/1‑239 (MQ=255)
                                                                                                                                                                                                          gttgtGTAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAATTTCTCATGCCCg                             >  1:453295/1‑251 (MQ=255)
                                                                                                                                                                                                             gtgtAAAGGCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAATTTCTCATGCCCGTTg                          >  1:152096/1‑251 (MQ=255)
                                                                                                                                                                                                                    ggCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACt                                                                                                                                                                                   >  1:144609/1‑91 (MQ=255)
                                                                                                                                                                                                                    ggCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTaatc                                                                                                                           <  1:205225/147‑1 (MQ=255)
                                                                                                                                                                                                                    ggCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTaatc                                                                                                                           <  1:863531/147‑1 (MQ=255)
                                                                                                                                                                                                                    ggCTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAAccc                                                                                                                  <  1:169644/156‑1 (MQ=255)
                                                                                                                                                                                                                      cTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAATTTCTCATGCCCGTTGCCCATGGc                  <  1:119069/250‑1 (MQ=255)
                                                                                                                                                                                                                      cTTAATTAATAGCAAGAGATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAATTTCTCATGCCCGTTGCCCATGGCg                 >  1:204786/1‑251 (MQ=255)
                                                                                                                                                                                                                                    agagATCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGt                                                                                                                                                      >  1:739926/1‑104 (MQ=255)
                                                                                                                                                                                                                                      agaTCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAAt                                                                                          <  1:722477/162‑1 (MQ=255)
                                                                                                                                                                                                                                      agaTCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAATTTCTCATGCCCGTTGCCCATGGCGACGCCGACACCCAcg  >  1:306398/1‑250 (MQ=255)
                                                                                                                                                                                                                                       gaTCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAAc                                                                                                  <  1:772656/153‑1 (MQ=255)
                                                                                                                                                                                                                                       gaTCACGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGc                                                      >  1:849007/1‑197 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                   
TTTTTCAAGGTGCCGGCGTCTTTACCGCCGAATGTCGGTGCAGCTTGTCCTGCTTGAGAAGTGGTAAAGAAGATCGGATTGATATTCGTAAAATCATTTTCCTGCTGCATACGATCCATTAAAACGGAACCCACCATTCCGCGCCAACCGATAAAACCAACGTTTTTCATAAGTTTGTCCTTCTAGATGAGATTGAAAAGATGTTGTGTAAAGGCTTAATTAATAGCAAGAGATCATGCACAAAAGCAAGTATTTTTCGATATTTTTTTGCTTTTAAAAAATAATCGAAAAAACGACCACACTTTTTTAAATGCTCGCATTTTCATCAATGTCGGTGCCACGATCGTAAAGGCTTAATCAATCAACCCTGCCTTCACCAGAAACCGATAAATGCCGTCTTGGTCGATAGGATCCGCCACATGATCGGCGATGGCTTTTAATTTCTCATGCCCGTTGCCCATGGCGACGCCGACACCCACG  >  1/675597‑676076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑