| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 640,588 | G→A | intergenic (+143035/‑58755) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 640,588 | 0 | G | A | 100.0% | 193.5 / NA | 70 | intergenic (+143035/‑58755) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (45/25); total (45/25) | |||||||||||
TTCCGGCAGCCGTGATTTCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTGAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTGTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCTTTAGCCTTATTGGGCGCGGG > 1/640341‑640833 | ttCCGGCAGCCGTGATTTCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAAc < 1:246499/251‑1 (MQ=255)ttCCGGCAGCCGTGATTTCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAAc < 1:588800/251‑1 (MQ=255)ttCCGGCAGCCGTGATTTCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAAc < 1:154287/251‑1 (MQ=255)ttCCGGCAGCCGTGATTTCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGCGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAAc < 1:673907/251‑1 (MQ=255) cAGCCGTGATTTCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGa < 1:413440/250‑1 (MQ=255) ttCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTTCCTTGGGGGTATTATTTACTATTTCGTTACGTTGTGCCATGGTAGCAAAAAGTGAttttccctat > 1:360740/1‑243 (MQ=255) tCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATcc < 1:429606/251‑1 (MQ=255) tCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATcc < 1:440453/251‑1 (MQ=255) tCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATcc < 1:236461/251‑1 (MQ=255) cGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAggg < 1:137121/250‑1 (MQ=255) cGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAggg < 1:721109/250‑1 (MQ=255) cGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAggg < 1:267894/250‑1 (MQ=255) gATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCCAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAAtttt > 1:843752/1‑251 (MQ=255) aTTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAAc > 1:345802/1‑198 (MQ=255) aaaTAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCTGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATcc < 1:402755/207‑1 (MQ=255) aaaTAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAAc < 1:104227/190‑1 (MQ=255) aaaTAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATcc < 1:428617/207‑1 (MQ=255) aaaTAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGc > 1:558388/1‑219 (MQ=255) aaaTAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATcaca > 1:103713/1‑251 (MQ=255) aaaTAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATcaca > 1:346084/1‑251 (MQ=255) ataataTGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATcaca > 1:471003/1‑249 (MQ=255) ataataTGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATcaca > 1:1407/1‑249 (MQ=255) atatGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGAt > 1:722974/1‑251 (MQ=255) gTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAg < 1:371438/201‑1 (MQ=255) cccAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCggg > 1:582744/1‑250 (MQ=255) aGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGc < 1:892018/198‑1 (MQ=255) aGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGa > 1:369480/1‑251 (MQ=255) aGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGa > 1:264227/1‑251 (MQ=255) ccTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGGGTGaaa > 1:164095/1‑251 (MQ=255) cttctGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAAc < 1:271713/164‑1 (MQ=255) acTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATcc > 1:711521/1‑168 (MQ=255) acTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTAcggcg > 1:468676/1‑251 (MQ=255) cTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAg > 1:692514/1‑152 (MQ=255) cttcCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTg > 1:891118/1‑251 (MQ=255) tcCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAggg < 1:455108/167‑1 (MQ=255) ttGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGGGCTGGCGAGTATAGTGGCGTTTTTaa > 1:258187/1‑250 (MQ=255) gTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCa > 1:740936/1‑251 (MQ=255) gggCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGGGTTTTTAACCAATGGTCTg > 1:782067/1‑250 (MQ=255) gCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGGTTTTAAcc > 1:771484/1‑239 (MQ=255) gCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGGGGCGTTTTTAACCAATGGTCTgcg > 1:175131/1‑250 (MQ=255) aTTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGGATAGTGGCGGTTTTAACCAATGGTCTGCGCGTg > 1:790664/1‑251 (MQ=255) gTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCg > 1:551570/1‑251 (MQ=255) gTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGc > 1:854302/1‑205 (MQ=255) gTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTtggtg < 1:646455/240‑1 (MQ=255) gTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGt > 1:663616/1‑250 (MQ=255) aCTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTgg > 1:102712/1‑172 (MQ=255) tGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAg < 1:263763/251‑1 (MQ=255) gggTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGGGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCg > 1:519118/1‑155 (MQ=255) attattTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATcc < 1:136564/57‑1 (MQ=255) attattTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCgg > 1:749262/1‑117 (MQ=255) attattTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGa > 1:219105/1‑251 (MQ=255) ttattTACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGAt > 1:75235/1‑251 (MQ=255) tttACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGAc > 1:703506/1‑108 (MQ=255) ttACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATcc < 1:538127/52‑1 (MQ=255) ttACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATcc < 1:555902/52‑1 (MQ=255) ttACTATTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGAt > 1:239733/1‑191 (MQ=255) aTTCCGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGAtttt > 1:483721/1‑250 (MQ=255) ccGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTgg > 1:102883/1‑148 (MQ=255) ccGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAAcc > 1:492077/1‑159 (MQ=255) ccGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAg > 1:685927/1‑185 (MQ=255) ccGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCttt > 1:47308/1‑251 (MQ=255) ccGTTACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTAACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCttt > 1:9226/1‑251 (MQ=255) tACGTCGTGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCTTTAGcc < 1:267874/251‑1 (MQ=255) gtGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCTTTAGCCTTATTg > 1:489752/1‑251 (MQ=255) tGCCATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCTTTAGCCTTATTg < 1:615888/250‑1 (MQ=255) ccATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGAc > 1:277131/1‑86 (MQ=255) ccATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTtggt > 1:208438/1‑200 (MQ=255) ccATGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGCGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATTACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCg > 1:661401/1‑137 (MQ=255) tGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGt > 1:81568/1‑217 (MQ=255) tGGTAGTAAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGGACCGATGGGATTTTCTTTAGCCTTATTGGGcgcg > 1:36652/1‑251 (MQ=255) gtagtaAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGc > 1:302083/1‑115 (MQ=255) gtagtaAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTc > 1:117593/1‑148 (MQ=255) gtagtaAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTc > 1:459893/1‑230 (MQ=255) gtagtaAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCTTTAGCCTTATTGGGCGCggg > 1:787535/1‑251 (MQ=255) gtagtaAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCTTTAGCCTTATTGGGCGCggg > 1:851837/1‑251 (MQ=255) gtagtaAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCTTTAGCCTTATTGGGCGCggg > 1:402488/1‑251 (MQ=255) gtagtaAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTTTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGGGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCt > 1:808192/1‑231 (MQ=255) | TTCCGGCAGCCGTGATTTCCATGGCGGTACTGAAATTCTACAAGGATTCCAGTATTTTAGAAAATAATATGGTGCAAACCCAAGCCTCTTCTGCGGGGACACTTTCTTCCGTGATTTTCGTATTGCCGGGTTTGTTAATGATGGGCTATTGGCAGGATTTTCCGTTTTGGCAAACCATGTTGATTTGTGCGGCGGGCGGTACTTTGGGGGTATTATTTACTATTCCGTTACGTCGTGCCATGGTAGTGAACAGTGATTTGCCTTATCCTGAGGGTGTGGCAGCGGCAGAAATTTTAAAAGCCGGTAATCACACTGATGGTGACAGCGGTGTGAAAGACATTGTTTACGGCGGCGTGCTGGCGAGTATAGTGGCGTTTTTAACCAATGGTCTGCGCGTGATGGCAGATAGCGCCAGCGGCTGGTTCACCGGATTTGGTGGCAAAGCCGTCTTTCAGGTACCGATGGGATTTTCTTTAGCCTTATTGGGCGCGGG > 1/640341‑640833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |