| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 635,813 | G→C | intergenic (+138260/‑63530) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 635,813 | 0 | G | C | 100.0% | 145.9 / NA | 56 | intergenic (+138260/‑63530) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (4/52); total (4/52) | |||||||||||
ATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAACGTTCTTGCGAGCAACCACAGTGGAAGCTTACTGTTTGCGGCAGGAAGAGTTCGACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAGCGCATGAAATAATCTTCCAAACATTCG > 1/635586‑636056 | aTTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAAc < 1:58008/250‑1 (MQ=255) aaaTTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGtat < 1:467549/250‑1 (MQ=255) ttCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AAc < 1:238204/251‑1 (MQ=255) cGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGTATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:433478/251‑1 (MQ=255) cGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:726706/251‑1 (MQ=255) cGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:14724/251‑1 (MQ=255) cGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:659612/251‑1 (MQ=255) cGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAAttc < 1:649633/251‑1 (MQ=255) ccGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAAc < 1:11487/249‑1 (MQ=255) cGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATgg < 1:193732/251‑1 (MQ=255) cGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATgg < 1:3216/251‑1 (MQ=255) ccTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:218447/208‑1 (MQ=255) ccTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGGTCCACGCCTTCTTTTTGATATAAAAGGGATAAAAAATTTTTCTCCCTTTAAA‑CGAAAAAttctttttcttttattgtt > 1:760916/1‑244 (MQ=255) tATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGtt < 1:494499/251‑1 (MQ=255) tATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGtt < 1:370980/251‑1 (MQ=255) gAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGtt < 1:37248/247‑1 (MQ=255) aaCAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCg < 1:210798/250‑1 (MQ=255) aaCAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCGTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCg < 1:434637/250‑1 (MQ=255) cAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTaa < 1:104653/210‑1 (MQ=255) cAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATg < 1:777609/235‑1 (MQ=255) aataatGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:587459/193‑1 (MQ=255) gcaTTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:140040/177‑1 (MQ=255) tCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCgg < 1:834870/251‑1 (MQ=255) cGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGt < 1:828565/251‑1 (MQ=255) gCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACg < 1:546976/157‑1 (MQ=255) gCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCgg < 1:838897/244‑1 (MQ=255) atCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTgaaccggaac < 1:8157/251‑1 (MQ=255) gCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCgg < 1:245482/231‑1 (MQ=255) tGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAAc < 1:641554/139‑1 (MQ=255) gCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATgg < 1:675847/181‑1 (MQ=255) gCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCg < 1:19343/187‑1 (MQ=255) aTTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGcc < 1:777509/251‑1 (MQ=255) aTTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGcc < 1:682309/251‑1 (MQ=255) ttCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGAAACCGCAGTGAAAACTTCCCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCgcgc < 1:381989/251‑1 (MQ=255) aTTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGAc < 1:518737/251‑1 (MQ=255) tttCTCCTTCGGAATTCAATAACAGCGCGGCGCCGGAGCGTTTTTGCGAGCAACCGCATTGAAAACTTACCGCTTGTGGCGGGAAGATTTCCACGCTTTCTTCGTGATATAAACGTTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGAcc < 1:663190/251‑1 (MQ=255) gAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGt < 1:490088/250‑1 (MQ=255) aTCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATgg < 1:612844/151‑1 (MQ=255) cgcgGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTg < 1:449607/250‑1 (MQ=255) ccccGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAatg < 1:31606/249‑1 (MQ=255) gcGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGGGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGc < 1:289226/249‑1 (MQ=255) cAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTTCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGc < 1:427845/249‑1 (MQ=255) cAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGc < 1:626191/249‑1 (MQ=255) cAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGc < 1:724829/249‑1 (MQ=255) cAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTg < 1:189749/251‑1 (MQ=255) ccgcaGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTc < 1:149220/248‑1 (MQ=255) cagtgaaaccttcccgcttgtggcgggAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑ACCAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCgg < 1:901760/225‑1 (MQ=255) tgaaaGCTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCTGGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAGCCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAgc < 1:646568/247‑1 (MQ=255) taccgcttgtggcgggAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGc < 1:490698/218‑1 (MQ=255) gcttgtggcgggAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGc < 1:45500/218‑1 (MQ=255) ggcgggAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTg > 1:468046/5‑224 (MQ=255) cgggAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAGCGCATGAAATAATCTTCCaaa < 1:398352/248‑1 (MQ=255) ggAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAGCGCATGAAATAATCTTCCAAACa < 1:327771/250‑1 (MQ=255) gTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGcc < 1:690463/184‑1 (MQ=255) gTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAGCGCATGAAATAATCTTCCAAACATTCg > 1:451/1‑248 (MQ=255) gTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAGCGCATGAAATAATCTTCCAAACATTCg > 1:375342/1‑248 (MQ=255) | ATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAACGTTCTTGCGAGCAACCACAGTGGAAGCTTACTGTTTGCGGCAGGAAGAGTTCGACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAGCGCATGAAATAATCTTCCAAACATTCG > 1/635586‑636056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |