| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 635,786 | G→A | intergenic (+138233/‑63557) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 635,786 | 0 | G | A | 98.3% | 144.7 / NA | 59 | intergenic (+138233/‑63557) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (6/52); total (6/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAACGATATTGCATAAAAATTGACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAACGTTCTTGCGAGCAACCACAGTGGAAGCTTACTGTTTGCGGCAGGAAGAGTTCGACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAGC > 1/635544‑636030 | cAACGATATTGCATAAAAATTGACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAccg < 1:70957/250‑3 (MQ=255)cAACGATATTGCATAAAAATTGACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAccg > 1:394738/1‑248 (MQ=255)cAACGATATTGCATAAAAATTGACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAc < 1:649088/248‑1 (MQ=255) aaCGATATTGCATAAAAATTGACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAccgct < 1:570074/251‑5 (MQ=255) cGATATTGCATAAAAATTGACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGG‑AATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAccgcttgt > 1:521073/1‑244 (MQ=255) ttGCATAAAAATTGACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAccgcttgtggcg < 1:113202/251‑12 (MQ=255) aaaaTTGACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAccgcttgtggcg < 1:222518/244‑12 (MQ=255) gACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAccgcttgtggcggggaggggttca > 1:578483/1‑227 (MQ=255) gCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGTATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAag < 1:887247/232‑1 (MQ=255) aTTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAAc < 1:58008/250‑1 (MQ=255) aaaTTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGtat < 1:467549/250‑1 (MQ=255) ttCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AAc < 1:238204/251‑1 (MQ=255) cGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGTATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:433478/251‑1 (MQ=255) cGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:726706/251‑1 (MQ=255) cGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:659612/251‑1 (MQ=255) cGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:14724/251‑1 (MQ=255) cGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAAttc < 1:649633/251‑1 (MQ=255) ccGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAAc < 1:11487/249‑1 (MQ=255) cGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATgg < 1:193732/251‑1 (MQ=255) cGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATgg < 1:3216/251‑1 (MQ=255) ccTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:218447/208‑1 (MQ=255) ccTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGGTCCACGCCTTCTTTTTGATATAAAAGGGATAAAAAATTTTTCTCCCTTTAAA‑CGAAAAAttctttttcttttattgtt > 1:760916/1‑244 (MQ=255) tATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGtt < 1:370980/251‑1 (MQ=255) tATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGtt < 1:494499/251‑1 (MQ=255) gAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGtt < 1:37248/247‑1 (MQ=255) aaCAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCg < 1:210798/250‑1 (MQ=255) aaCAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCGTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCg < 1:434637/250‑1 (MQ=255) cAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTaa < 1:104653/210‑1 (MQ=255) cAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATg < 1:777609/235‑1 (MQ=255) aataatGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAccgcttgtggcg > 1:159921/1‑139 (MQ=255) aataatGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:587459/193‑1 (MQ=255) gcaTTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACaa < 1:140040/177‑1 (MQ=255) tCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCgg < 1:834870/251‑1 (MQ=255) cGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGt < 1:828565/251‑1 (MQ=255) ttGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAcc > 1:730855/1‑114 (MQ=255) gCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTAccg < 1:189800/114‑3 (MQ=255) gCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACg < 1:546976/157‑1 (MQ=255) gCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCgg < 1:838897/244‑1 (MQ=255) atCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTgaaccggaac < 1:8157/251‑1 (MQ=255) gCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCgg < 1:245482/231‑1 (MQ=255) tGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAAc < 1:641554/139‑1 (MQ=255) gCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATgg < 1:675847/181‑1 (MQ=255) gCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCg < 1:19343/187‑1 (MQ=255) aTTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGcc < 1:682309/251‑1 (MQ=255) aTTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGcc < 1:777509/251‑1 (MQ=255) ttCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGAAACCGCAGTGAAAACTTCCCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCgcgc < 1:381989/251‑1 (MQ=255) aTTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGAc < 1:518737/251‑1 (MQ=255) tttCTCCTTCGGAATTCAATAACAGCGCGGCGCCGGAGCGTTTTTGCGAGCAACCGCATTGAAAACTTACCGCTTGTGGCGGGAAGATTTCCACGCTTTCTTCGTGATATAAACGTTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGAcc < 1:663190/251‑1 (MQ=255) gAAATCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGt < 1:490088/250‑1 (MQ=255) aTCAATAACAGCGCGGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATgg < 1:612844/151‑1 (MQ=255) cgcgGCGCCGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTg < 1:449607/250‑1 (MQ=255) ccccGGAGCGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAatg < 1:31606/249‑1 (MQ=255) gcGTTCTTGCGAGCAACCGCAGTGAAAACTTACCGCTTGGGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGc < 1:289226/249‑1 (MQ=255) cAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTTCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGc < 1:427845/249‑1 (MQ=255) cAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGc < 1:724829/249‑1 (MQ=255) cAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGc < 1:626191/249‑1 (MQ=255) cAACCGCAGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTg < 1:189749/251‑1 (MQ=255) ccgcaGTGAAAACTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTc < 1:149220/248‑1 (MQ=255) tgaaaGCTTACCGCTTGTGGCGGGAAGAGTTCCACGCTTTCTTCTGGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAGCCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAgc < 1:646568/247‑1 (MQ=255) | CAACGATATTGCATAAAAATTGACCGTACTTTGCTTAACCGGATTAGAATTCGGCGTTAACCTTAAGAAGCCGATTGCTTCAACTTCTCAATCGCCTCTTTATTGAACAAATAATGAGTGCCGCAGCATTCGCATTGCATATCGATGGTGCCTTGGTGTTCTGCCAGAATTTGTTCGATTTCTCCTTCGGAAATCAATAACAGCGCGGCGCCGGAACGTTCTTGCGAGCAACCACAGTGGAAGCTTACTGTTTGCGGCAGGAAGAGTTCGACGCTTTCTTCGTGATATAAACGGTAT‑AACAATTCTTCCGCCGTTAAACCGAAAATTTCTTCTTCTTTAATGGTTGCCGTTAGCGTTGCCAAATGTTCGAAATCTTCCGGTGAACCGGAACCGTCCGGCACGATTTGCAACAACACGCCCGCGCTGACCGGTCTGCCGTCATATTCGCCGGTGCGAATGATGAGCTGGGTTTGTAGCTGTTCGGAGC > 1/635544‑636030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |