| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 632,112 | T→G | intergenic (+134559/‑67231) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 632,112 | 0 | T | G | 100.0% | 231.9 / NA | 84 | intergenic (+134559/‑67231) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (50/34); total (50/34) | |||||||||||
GATTTTGACGCCCGCGTGCGTGCCGTATCGCATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCTCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAGTGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGTTAAAATCACTTATGGTTCGACAAGT > 1/631866‑632352 | gATTTTGACGCCCGCGTGCGTGCCGTATCGCATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGaa > 1:587358/1‑251 (MQ=255) ccGCGTGCGTGCCGTATCGCATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTc < 1:461486/251‑1 (MQ=255) ccGTATCGCATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAAc < 1:613255/251‑1 (MQ=255) cGTATCGCATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAAct < 1:248400/251‑1 (MQ=255) gTATCGCATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAActt > 1:505571/1‑251 (MQ=255) tATCGCATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAActt < 1:762909/250‑1 (MQ=255) aTCGCATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAAc < 1:893232/247‑1 (MQ=255) cATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGa > 1:27685/1‑251 (MQ=255) cACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAACCCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATAC‑CCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGAt < 1:217521/251‑1 (MQ=255) aCCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGAt > 1:59949/1‑251 (MQ=255) ccTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGt > 1:676346/1‑218 (MQ=255) ccTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTc > 1:54970/1‑222 (MQ=255) ccTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATg > 1:335285/1‑251 (MQ=255) ccTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATg > 1:824988/1‑251 (MQ=255) cTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATgg < 1:380632/251‑1 (MQ=255) aTTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGaa > 1:84322/1‑250 (MQ=255) aTTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAAc < 1:4771/251‑1 (MQ=255) tCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGc < 1:786617/251‑1 (MQ=255) tCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGc < 1:73535/251‑1 (MQ=255) gCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGAc > 1:70047/1‑231 (MQ=255) gCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATc > 1:669330/1‑250 (MQ=255) ccTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATc < 1:614973/249‑1 (MQ=255) ttAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAac < 1:599018/251‑1 (MQ=255) ccGCAGCAAACAAGCGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAacac < 1:826845/249‑1 (MQ=255) ccGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAacac < 1:826961/249‑1 (MQ=255) gcagcaAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAGCCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATcc > 1:703176/1‑242 (MQ=255) cagcaAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGGGAACGCAGAAGATCCAacac > 1:889410/1‑246 (MQ=255) aaacaaacGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAacac > 1:89996/1‑242 (MQ=255) aaacaaacGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCaaa > 1:649359/1‑251 (MQ=255) acaaacGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAAc < 1:861649/251‑1 (MQ=255) gCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGAt > 1:805904/1‑251 (MQ=255) aTTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAAc < 1:141650/162‑1 (MQ=255) aaGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTg < 1:713168/239‑1 (MQ=255) gCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATGCACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAg < 1:207443/250‑1 (MQ=255) aTGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCTGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGt < 1:456944/248‑1 (MQ=255) aTGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAgg < 1:515105/247‑1 (MQ=255) gTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTAtt > 1:276454/1‑251 (MQ=255) gCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAAc < 1:406857/213‑1 (MQ=255) tCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAg > 1:68879/1‑251 (MQ=255) gTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGt < 1:289768/250‑1 (MQ=255) gTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGt < 1:527685/250‑1 (MQ=255) gaTTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGt > 1:115664/1‑232 (MQ=255) gaTTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCgg > 1:701328/1‑251 (MQ=255) gaTTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCgg > 1:421092/1‑251 (MQ=255) gaTTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCgg > 1:482999/1‑251 (MQ=255) tAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCTGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACTACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGata > 1:146809/1‑251 (MQ=255) tAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGata > 1:487651/1‑251 (MQ=255) aaTTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGt > 1:540492/1‑228 (MQ=255) aTCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCgtt < 1:396352/251‑1 (MQ=255) cGCCTGCGTTGAGTCGGCAGAAAAAAACCACGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCATGTTGGATAACCTCGCGAACTTACGAACCCTGGTGGATAACTTCTTCGACCACATGATGGTGAACGAAGAAGTACCAACACTCCGCTAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCgttgt > 1:3690/1‑251 (MQ=255) ccTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGttgttg > 1:507129/1‑251 (MQ=255) gCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCaa > 1:387975/1‑251 (MQ=255) gAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGt < 1:775913/210‑1 (MQ=255) gAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCaaaaatg > 1:751372/1‑248 (MQ=255) cTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGc < 1:242192/251‑1 (MQ=255) cGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCaga > 1:517751/1‑138 (MQ=255) cGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCaga > 1:348282/1‑138 (MQ=255) aaGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACgg < 1:799245/251‑1 (MQ=255) gTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTg > 1:151548/1‑249 (MQ=255) gtTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGAc > 1:402086/1‑226 (MQ=255) gtTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAg > 1:539333/1‑246 (MQ=255) aaaCGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGAc < 1:3477/95‑1 (MQ=255) cGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCAt > 1:603576/1‑251 (MQ=255) gAAGTGCAACCACTTATCGAGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTAc > 1:841737/1‑172 (MQ=255) ccACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGcgt < 1:779508/251‑1 (MQ=255) cACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGcgt > 1:136998/1‑250 (MQ=255) cTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGcgtcgt > 1:377918/1‑251 (MQ=255) tCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAA‑ACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTa > 1:557363/1‑251 (MQ=255) cgAAAGGCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGt < 1:527162/251‑1 (MQ=255) ggCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGt > 1:226963/1‑42 (MQ=255) ggCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGc > 1:813283/1‑180 (MQ=255) ggCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGc > 1:229539/1‑213 (MQ=255) gCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAacac > 1:308258/1‑96 (MQ=255) gCGAATACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGTTAAAAt > 1:50242/1‑251 (MQ=255) aaTACACCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGAc < 1:226183/198‑1 (MQ=255) acacCGCCGTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGTTAAAATCACTTa > 1:731289/1‑251 (MQ=255) ccgccgTGTTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGTTAAAATCACTTATgg < 1:652757/251‑1 (MQ=255) gtgtTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGt < 1:826559/62‑1 (MQ=255) gtgtTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGt > 1:571488/1‑231 (MQ=255) gtgtTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGTTAAAATCACTTATGGTTCGa > 1:113506/1‑251 (MQ=255) gtTGGATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGAc > 1:549929/1‑185 (MQ=255) ggATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGTTAAAATCACTTATGGTTCGACAAGt > 1:44130/1‑251 (MQ=255) ggATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGTTAAAATCACTTATGGTTCGACAAGt > 1:617629/1‑251 (MQ=255) ggATAAACTCGCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAATGTGACAATGCAAGACGGTTGCTGAGCTTGACGAAGCATGAATCTTGCGTCGTTCTTAGtt < 1:838509/227‑1 (MQ=255) | GATTTTGACGCCCGCGTGCGTGCCGTATCGCATTTCCGCACCTTAGATTCTGCAGAAGCCTTAGCCGCAGCAAACAAACGCGTGGCGAACATTCTTGCCAAAGCAGATGTTGCAATCGGTGAGATTAATTTGATCGCCTGCGTTGAGTCGGCAGAAAAAAACCTCGCCGAAGCCGTGCTTGTGTTACAAACGGAAGTGCAACCACTTATCGCGAAAGGCGAATACACCGCCGTGTTGGATAAACTCTCGAACTTACGTACTCCGGTGGATAACTTCTTCGACAACGTGATGGTGAACGCAGAAGATCCAACACTCCGCCAAAACCGCTTGGCGATTTTGAATACGCTACAAGGTTTATTCTTACAGGTGGCGGATATTTCGTTGTTGCAATAAAGCCAAAAGTGTGACAATGCAAGACGGTTGCTGAGCTTGTCGAAGCATGAATCTTGCGTCGTTCTTAGTTAAAATCACTTATGGTTCGACAAGT > 1/631866‑632352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |