| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 627,729 | T→G | intergenic (+130176/‑71614) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 627,729 | 0 | T | G | 100.0% | 243.0 / NA | 85 | intergenic (+130176/‑71614) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (37/48); total (37/48) | |||||||||||
GCTGGCGCTCACATAAAGTGCGGTTGGAAATCCAAGTGTTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAATTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTAAAAATGCTCGGTTTCGACCCGACCCAGAACGACATTCGTT > 1/627491‑627972 | gCTGGCGCTCACATAAAGTGCGGTTGGAAATCCAAGTGTTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGc < 1:97487/250‑1 (MQ=255) cacaTAAAGTGCGGTTGGAAATCCAAGTGTTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCAc > 1:748139/1‑250 (MQ=255) cacaTAAAGTGCGGTTGGAAATCCAAGTGTTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCAc > 1:567457/1‑250 (MQ=255) cacaTAAAGTGCGGTTGGAAATCCAAGTGTTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCAc > 1:91524/1‑250 (MQ=255) aaaGTGCGGTTGGAAATCCAAGTGTTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATg < 1:722199/251‑1 (MQ=255) aTCCAAGTGTTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTcgcgcg < 1:250367/251‑1 (MQ=255) tgtTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGc < 1:531745/251‑1 (MQ=255) tgtTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGc < 1:255351/251‑1 (MQ=255) ccccACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGaa > 1:585424/1‑250 (MQ=255) aCCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGAt > 1:208188/1‑251 (MQ=255) cACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCg < 1:878270/251‑1 (MQ=255) cctttcctttATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTAtgt < 1:538227/250‑1 (MQ=255) ctttcctttATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGc < 1:618680/251‑1 (MQ=255) tcctttATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGc < 1:36380/251‑1 (MQ=255) cctttATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTc < 1:789293/188‑1 (MQ=255) cctttATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGc < 1:157387/247‑1 (MQ=255) cctttATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGc > 1:23109/1‑250 (MQ=255) cctttATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGc > 1:708576/1‑250 (MQ=255) cccGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGc < 1:637028/251‑1 (MQ=255) cccGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGc < 1:670375/251‑1 (MQ=255) gtTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAg > 1:13345/1‑251 (MQ=255) tttCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTCCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCg > 1:828500/1‑203 (MQ=255) cAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGc < 1:137171/198‑1 (MQ=255) cAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGt > 1:18610/1‑251 (MQ=255) gTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGc < 1:848590/223‑1 (MQ=255) gTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGcc > 1:847317/1‑227 (MQ=255) gTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGc > 1:299109/1‑234 (MQ=255) gTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGAc < 1:349778/242‑1 (MQ=255) gTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCg > 1:507975/1‑251 (MQ=255) gTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCg > 1:381969/1‑251 (MQ=255) gTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGACATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGCTGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGTTCg > 1:443003/1‑251 (MQ=255) gTATAATGGCACGCATTTTCCACCCTTCAATTCATAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGc < 1:506619/223‑1 (MQ=255) taATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTa > 1:197723/1‑251 (MQ=255) ggCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATgg > 1:603832/1‑250 (MQ=255) ccACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAAc < 1:285282/251‑1 (MQ=255) cTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGc < 1:684069/172‑1 (MQ=255) cTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGttt > 1:840482/1‑251 (MQ=255) cAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCa < 1:497159/251‑1 (MQ=255) aTTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCTGAACCGTTTGCAAc < 1:281876/251‑1 (MQ=255) tCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCt > 1:252801/1‑197 (MQ=255) tCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACat > 1:136462/1‑251 (MQ=255) gTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACatta > 1:781463/1‑251 (MQ=255) aCTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATc < 1:462782/251‑1 (MQ=255) ttATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAAc < 1:749274/227‑1 (MQ=255) ttATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTc < 1:297777/251‑1 (MQ=255) caTTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGcc < 1:12043/164‑1 (MQ=255) caTTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTctgtcggacggcgtgaaggc < 1:558708/205‑20 (MQ=255) tttCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACAttatta < 1:637852/218‑1 (MQ=255) aGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAg < 1:628550/151‑1 (MQ=255) gCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACAtt > 1:627271/1‑251 (MQ=255) gCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACAtt > 1:327115/1‑251 (MQ=255) gCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACAtt > 1:662146/1‑251 (MQ=255) tGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAg > 1:547075/1‑251 (MQ=255) aTTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAAc < 1:44920/199‑1 (MQ=255) aTTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAgg < 1:137181/217‑1 (MQ=255) ccTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAAt < 1:891601/204‑1 (MQ=255) ccTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTAt < 1:848079/251‑1 (MQ=255) aCAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCg > 1:301085/1‑180 (MQ=255) cAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGc < 1:800365/141‑1 (MQ=255) cAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGa > 1:288987/1‑251 (MQ=255) gAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGa < 1:615183/248‑1 (MQ=255) gAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGa < 1:446790/248‑1 (MQ=255) aTACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTg > 1:806090/1‑244 (MQ=255) gCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTaaaaa < 1:641472/250‑1 (MQ=255) gCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTaaaaa < 1:33331/250‑1 (MQ=255) aaCCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGc < 1:319260/126‑1 (MQ=255) aaCCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCa < 1:129473/182‑1 (MQ=255) aaCCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAggt > 1:108272/1‑191 (MQ=255) aaCCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGa < 1:668831/236‑1 (MQ=255) aaCCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTaaaaa < 1:384056/247‑1 (MQ=255) aGGTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTAAAAATGCTCGGtt > 1:236185/1‑251 (MQ=255) gTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAg < 1:354465/129‑1 (MQ=255) gTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAgg < 1:476770/216‑1 (MQ=255) gTTGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGa < 1:662760/217‑1 (MQ=255) ttGTACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCAc > 1:347032/1‑200 (MQ=255) tACGGTGGTGCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTAAAAATGCTCGGTTTcgac < 1:572357/250‑1 (MQ=255) gtggtgCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAAcc > 1:473335/1‑188 (MQ=255) ggtgCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAgg < 1:191115/206‑1 (MQ=255) gtgCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGa < 1:121939/218‑1 (MQ=255) gtgCAGCCGTTTGATATGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTAAAAATGCTCGGTTTCGACCCGACCCa > 1:538832/1‑251 (MQ=255) atatGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGc > 1:456528/1‑84 (MQ=255) atatGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAAcc > 1:489028/1‑172 (MQ=255) atatGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAgg > 1:118305/1‑192 (MQ=255) atatGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTAAAAATGCTCGGTTTCGACCCGACCCAGAACGACATTCGt > 1:208866/1‑251 (MQ=255) tatGGAAGTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTAAAAATGCTCGGTTTCGACCCGACCCAGAACGACATTCGtt < 1:746806/251‑1 (MQ=255) | GCTGGCGCTCACATAAAGTGCGGTTGGAAATCCAAGTGTTTTCCCCACCGCACTTTTTTCCGCCTTTCCTTTATCCCGCCTTGTGTTTTCAGTATAATGGCACGCATTTTCCACCCTTCAATTCGTAGAACTGATTATGACAACATTTAATGTAAAAACTTTTCAAGGCATGATTCTTGCCTTACAGGAATACTGGGCGAACCAAGGTTGTACGGTGGTGCAGCCGTTTGATATGGAATTGGGCGCGGGCACTTCGCACCCGATGACGGCACTTCGCGCGTTAGGGCCGGAACCGATGGCGTTTGCCTATGTGCAGCCTTCACGCCGTCCGACAGACGGTCGTTATGGCGAAAATCCGAACCGTTTGCAACATTATTATCAATTCCAGGTGGTGATCAAACCTTCACCGGACAACATTCAGGAACTGTATTTGGATTCCTTAAAAATGCTCGGTTTCGACCCGACCCAGAACGACATTCGTT > 1/627491‑627972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |