| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 578,228 | G→A | intergenic (+80675/‑121115) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 578,228 | 0 | G | A | 100.0% | 201.5 / NA | 75 | intergenic (+80675/‑121115) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (35/40); total (35/40) | |||||||||||
TTTTTAGATGTCACCGGTCGCATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACTCGCTAAAAACATCTTTAAAAGAAACCGCACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGATCATTTCGTCCACACCGAAGCCGATGC > 1/577983‑578473 | tttttAGATGTCACCGGTCGCATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACtt < 1:810363/251‑1 (MQ=255) tAGATGTCACCGGTCGCATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATg < 1:98030/251‑1 (MQ=255) tAGATGTCACCGGTCGCATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATg < 1:174244/251‑1 (MQ=255) aaatataaCCGGTCGCATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCCCCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGt < 1:288939/244‑1 (MQ=255) aGATGTCACCGGTCGCATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATg > 1:283471/1‑250 (MQ=255) tCACCGGTCGCATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGAt > 1:573197/1‑250 (MQ=255) gCATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGt > 1:873613/1‑251 (MQ=255) cATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCCCCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTg < 1:40301/251‑1 (MQ=255) aaCCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGtttttt > 1:265973/1‑251 (MQ=255) aaCCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCAAACTTTATg > 1:610877/1‑226 (MQ=255) aCCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATc < 1:586354/231‑1 (MQ=255) aCCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGttttttt > 1:312224/1‑251 (MQ=255) ttGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCtt < 1:486120/251‑1 (MQ=255) cAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCg < 1:541025/251‑1 (MQ=255) aGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTaaa > 1:452243/1‑251 (MQ=255) cGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTg > 1:257254/1‑210 (MQ=255) aTGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACaaa < 1:455779/251‑1 (MQ=255) tGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCacac < 1:120728/185‑1 (MQ=255) gACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGAc < 1:244515/199‑1 (MQ=255) cACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTg > 1:315272/1‑202 (MQ=255) cACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTc < 1:718057/213‑1 (MQ=255) cACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTc > 1:522126/1‑213 (MQ=255) cACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGt > 1:572947/1‑249 (MQ=255) cGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACtt > 1:274324/1‑251 (MQ=255) gTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACttt > 1:151709/1‑250 (MQ=255) gTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACttt > 1:393216/1‑250 (MQ=255) aTGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAg > 1:585642/1‑251 (MQ=255) gCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGa > 1:120285/1‑250 (MQ=255) cAAATTAAAATCCCCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGAcc < 1:683682/251‑1 (MQ=255) cAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGAc < 1:519771/250‑1 (MQ=255) aaaaTTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGAc < 1:485646/249‑1 (MQ=255) aaTTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCtt > 1:386147/1‑251 (MQ=255) tAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTg < 1:788455/251‑1 (MQ=255) aaTCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGttt < 1:458564/251‑1 (MQ=255) tcccccGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATg < 1:770042/158‑1 (MQ=255) ccccGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATc < 1:22602/250‑1 (MQ=255) cccGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCa > 1:284814/1‑251 (MQ=255) ccAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGc < 1:354943/205‑1 (MQ=255) gAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTg < 1:416561/166‑1 (MQ=255) aaaTCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGt < 1:288552/251‑1 (MQ=255) gACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACg > 1:450447/1‑251 (MQ=255) aCAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGc < 1:808554/251‑1 (MQ=255) aTGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATc > 1:397989/1‑144 (MQ=255) ggTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGtt > 1:760038/1‑251 (MQ=255) ggTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGtt > 1:544656/1‑251 (MQ=255) gttCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAgg > 1:797973/1‑190 (MQ=255) gTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGt < 1:394650/115‑1 (MQ=255) ggCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGt < 1:289243/111‑1 (MQ=255) ggCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGt < 1:812499/250‑1 (MQ=255) cTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCa > 1:789455/1‑251 (MQ=255) aaaaTGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACgg < 1:583877/251‑1 (MQ=255) gATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGc < 1:14653/196‑1 (MQ=255) aTCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAAt > 1:518925/1‑250 (MQ=255) ccTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGcc > 1:239248/1‑176 (MQ=255) ccTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTtg > 1:27141/1‑251 (MQ=255) cacGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCAttt < 1:266639/251‑1 (MQ=255) cGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTc < 1:266670/104‑1 (MQ=255) cGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAAc > 1:5934/1‑195 (MQ=255) cGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGaa < 1:259393/226‑1 (MQ=255) cGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTg > 1:699834/1‑251 (MQ=255) cGGCAAAACCATCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTg > 1:635139/1‑251 (MQ=255) aTCGTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAg > 1:142595/1‑251 (MQ=255) tCGTAGTTTACGGCACCCGCTAAAAACAGCTTTAAAAGAAACCACACGTTATGTTGATCGACTCAAGTGCGGTTTTTGTCTTAGGCGTTTTTCTGCCTAATGGCTAGACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGGTTAACGCATCGTTACAAAct < 1:776669/175‑1 (MQ=255) gTAGTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCaa > 1:414208/1‑251 (MQ=255) gTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAAct < 1:853914/170‑1 (MQ=255) gTTTACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAg > 1:416691/1‑250 (MQ=255) ttACGGCACCCGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGc > 1:143004/1‑249 (MQ=255) cacccGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGAt < 1:133357/246‑1 (MQ=255) cacccGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGAt < 1:744884/246‑1 (MQ=255) cacccGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGATc < 1:578984/247‑1 (MQ=255) cacccGCTAAAAACATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGATc < 1:314245/247‑1 (MQ=255) cATCTTTAAAAGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGAt < 1:644449/237‑1 (MQ=255) aGAAACCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGttt < 1:797457/105‑1 (MQ=255) aaaCCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGAt < 1:884271/225‑1 (MQ=255) aaaCCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGATCATTTCGTCCACACCGAAGCCGATg > 1:795735/1‑250 (MQ=255) aaaCCACACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGATCATTTCGTCCACACCGAAGCCGATGc < 1:616431/251‑1 (MQ=255) | TTTTTAGATGTCACCGGTCGCATTGCGCAAACCTTGCTCAATCTGGCAAAAATGCCGGAAGCGATGACTCACCCGGACGGTATGCAAATTAAAATCACCCGCCAGGAAATCGGACAAATGGTCGGTTGTTCGCGGGAAACCGTCGGGCGTATTCTGAAAATGCTGGAAGATCAACACCTCATCTCGGCACACGGCAAAACCATCGTAGTTTACGGCACTCGCTAAAAACATCTTTAAAAGAAACCGCACTTTATGTTGATCGACTCAAGTGCGGTTTTTTTCTTAGGCGTTTTTCTGCCTAATGGCTAAACAAAAGGTCTGAACACTTTCAGACCTTTTGTTTAATCAAGCCATCGTTTAACGCATCGTTACAAACTCTTCCGAACCTGTCGGGTGGATTGCCACGGTGTTGTCGAAATCGGCTTTGGTGGCACCCATTTTGATGGCGACAGCAAAGCCTTGGATCATTTCGTCCACACCGAAGCCGATGC > 1/577983‑578473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |