| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 575,771 | G→A | intergenic (+78218/‑123572) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 575,771 | 0 | G | A | 100.0% | 204.0 / NA | 76 | intergenic (+78218/‑123572) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (35/41); total (35/41) | |||||||||||
GGCATAAATGTTGCCATTACCGCCGGTCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACGTCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACAACGCAAAAATCTCGATATGATTTGCGCCAATGACG > 1/575525‑576017 | ggCATAAATGTTGCCATTACCGCCGGTCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCtt > 1:547800/1‑251 (MQ=255) aTAAATGTTGCCATTACCGCCGGTCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTAt < 1:126924/251‑1 (MQ=255) aaaTGTTGCCATTACCGCCGGTCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTg < 1:489270/251‑1 (MQ=255) aTGTTGCCATTACCGCCGGTCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGc < 1:852666/251‑1 (MQ=255) gCCATTACCGCCGGTCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTgcg > 1:599511/1‑250 (MQ=255) tttcaagcaggtaagACCCGCGAAGCCATCGATAAAGTGCGTTATATTTACAATCACAGCTAAGGAAAAATGGGATTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCAAATTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGcgacgc < 1:130777/237‑1 (MQ=255) ccgccgGTCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGc > 1:766901/1‑239 (MQ=255) ccgccgGTCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGtt > 1:389255/1‑251 (MQ=255) tCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAGGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGAt < 1:697831/250‑1 (MQ=255) tCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGAt < 1:825690/250‑1 (MQ=255) cATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACTTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACa > 1:512581/1‑251 (MQ=255) cATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTg > 1:611024/1‑215 (MQ=255) cATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACa > 1:716711/1‑251 (MQ=255) aTCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACAt < 1:194456/251‑1 (MQ=255) aTCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGc > 1:192282/1‑212 (MQ=255) aTCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGC‑‑TTGCGGAtccaataaggattgtgccacagc < 1:626711/250‑23 (MQ=255) gCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCt < 1:872662/197‑1 (MQ=255) ttATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTAt < 1:75640/223‑1 (MQ=255) cAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATg < 1:19977/250‑1 (MQ=255) cAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATg < 1:391900/250‑1 (MQ=255) cAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATg < 1:387038/250‑1 (MQ=255) cTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAAc < 1:583917/251‑1 (MQ=255) cTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAAc < 1:238405/251‑1 (MQ=255) ttGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTc < 1:854811/251‑1 (MQ=255) cGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATcg < 1:336944/171‑1 (MQ=255) cGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACatta < 1:751732/251‑1 (MQ=255) aaaCGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTAc < 1:555513/251‑1 (MQ=255) aaaCGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTAc < 1:369186/251‑1 (MQ=255) aCGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCg < 1:352732/251‑1 (MQ=255) tGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACg < 1:422210/251‑1 (MQ=255) tGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACg < 1:826139/251‑1 (MQ=255) gggCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGcgcc < 1:817598/143‑1 (MQ=255) gggCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAAc > 1:376590/1‑219 (MQ=255) aaTGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGc < 1:192453/132‑1 (MQ=255) aaTGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAGAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCt < 1:363604/250‑1 (MQ=255) cACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATc > 1:21308/1‑186 (MQ=255) ccTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCt < 1:661593/247‑1 (MQ=255) cTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCt > 1:64259/1‑246 (MQ=255) cTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCg < 1:712047/251‑1 (MQ=255) tCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTGGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAAt < 1:97670/251‑1 (MQ=255) cTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAAc < 1:93850/203‑1 (MQ=255) gTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTtgt > 1:487765/1‑251 (MQ=255) aTCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCt > 1:865758/1‑222 (MQ=255) aTCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCg < 1:533290/231‑1 (MQ=255) cTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGAGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTctggtcgg > 1:405528/1‑248 (MQ=255) ttGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGCGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTggg > 1:715759/1‑250 (MQ=255) ccGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTg > 1:200619/1‑250 (MQ=255) aaaaCACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGaa > 1:777121/1‑251 (MQ=255) aaaCACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGaaa < 1:281999/251‑1 (MQ=255) cATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCg > 1:47833/1‑251 (MQ=255) gATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTgtggtg > 1:262289/1‑219 (MQ=255) gATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCg < 1:628164/232‑1 (MQ=255) gATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGaaa > 1:228522/1‑235 (MQ=255) gATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGa > 1:863493/1‑251 (MQ=255) gATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGa > 1:43682/1‑251 (MQ=255) gATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGa > 1:785513/1‑251 (MQ=255) gATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGa > 1:302172/1‑251 (MQ=255) gATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCCGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTgtgg < 1:444883/217‑1 (MQ=255) tgtgACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGAtt > 1:358864/1‑251 (MQ=255) tgtgACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGAtt > 1:270855/1‑251 (MQ=255) cGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGc > 1:661938/1‑250 (MQ=255) cagcaAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATc < 1:644529/178‑1 (MQ=255) aaTGTGGCAAGCCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTAc < 1:34850/251‑1 (MQ=255) tgtgGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACaa > 1:862528/1‑251 (MQ=255) gtgGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACa > 1:259410/1‑149 (MQ=255) gtgGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAAt > 1:554614/1‑245 (MQ=255) tCCCTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAAtt < 1:623531/236‑1 (MQ=255) cccTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCg > 1:801663/1‑198 (MQ=255) cTTGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACAACGCAAAAATCTCGa > 1:22693/1‑251 (MQ=255) tGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTAc < 1:659780/233‑1 (MQ=255) tGAGTGCGCTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACAACGCAAAAATCTCGata < 1:326157/251‑1 (MQ=255) cTGTGAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACAACGCAAAAATCTCGATATGATTTg > 1:52826/1‑250 (MQ=255) gtgAAAAGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACAACGCAAAAATCTCGATATGATTTgcg > 1:670708/1‑250 (MQ=255) aGCCACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACAACGCAAAAATCTCGATATGATTTGCGCCAATGa > 1:729136/1‑251 (MQ=255) ccACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACAACGCAAAAATCTCGATATGATTTGCGCCAATGACg < 1:456251/251‑1 (MQ=255) ccACATCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACAACGCAAAAATCTCGATATGATTTGCGCCAATGACg < 1:30491/251‑1 (MQ=255) | GGCATAAATGTTGCCATTACCGCCGGTCCGACCCGCGAAGCCATCGATCCCGTGCGTTATATTTCCAATCACAGCTCCGGCAAAATGGGCTTTGCCATTGCCGAAGCCTTCGCCAAACGTGGGGCGAATGTCACCTTAATCGCAGGTCCTGTTAATCTTGCTACGCCGAAAAACACTTCCCGCATTGATGTGACGTCCGCGCAGCAAATGTGGCAAACCTCCCTTGAGTGCGCTGTGAAAAGCCACGTCTTTATTGGCTGCGCCGCCGTTGCGGATTATCGCGTTGCCGACATTGCCGAGCAGAAAATCAAAAAATCCGGTGAGGAAATGACATTAAAACTCATTAAAAACCCCGACATTATTACCGACGTTGCCTATCTTGCCGAAAATCGTCCGTTTGTGGTGGGCTTCGCTGCCGAAACGCAACATTTCGCCGATTACGCCAAAGATAAATTACAACGCAAAAATCTCGATATGATTTGCGCCAATGACG > 1/575525‑576017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |