Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 571,762 G→A intergenic (+74209/‑127581) unknown → / → unknown tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1571,7620GA100.0% 211.2 / NA 76intergenic (+74209/‑127581)unknown/unknowntRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (32/44);  total (32/44)

AATCAGAATGGTTAAAATAAATTAATTTTATGTCAATAACAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTGTTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATTTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATTGTGTTTAATAAAAAACATAAGGAAAATTATAATTTAGATACAATCAAAAATTATAATTTCGCTTGTCCACAAAATGACACAACACATATTTC  >  1/571516‑572002
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                
aaTCAGAATGGTTAAAATAAATTAATTTTATGTCAATAACAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTc                                                                                                                                                                                                                                               >  1:211918/1‑250 (MQ=255)
         ggTTAAAATAAATTAATTTTATGTCAATAACAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGtt                                                                                                                                                                                                                                     >  1:610636/1‑251 (MQ=255)
         ggTTAAAATAAATTAATTTTATGTCAATAACAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGtt                                                                                                                                                                                                                                     >  1:843266/1‑251 (MQ=255)
                   aattaattTTATGTCAATAACAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTtctc                                                                                                                                                                                                                            >  1:518644/1‑250 (MQ=255)
                       aattTTATGTCAATAACAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTgga                                                                                                                                                                                                                       >  1:729298/1‑251 (MQ=255)
                               gTCAATAACAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACaaa                                                                                                                                                                                                                >  1:554516/1‑250 (MQ=255)
                                       cAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTc                                                                                                                                                                                                                                               <  1:781542/211‑1 (MQ=255)
                                       cAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTggagga                                                                                                                                                                                                                    >  1:271179/1‑238 (MQ=255)
                                       cAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAAc                                                                                                                                                                                                        >  1:825317/1‑250 (MQ=255)
                                                 cGTTGCGAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTtctc                                                                                                                                                                                             <  1:345545/251‑1 (MQ=255)
                                                                             gCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAAcc                                                                                                                                                                                                       >  1:652968/1‑213 (MQ=255)
                                                                              cAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGa                                                                                                                                                                 <  1:342685/250‑1 (MQ=255)
                                                                                         gATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATgg                                                                                                                                                                               <  1:681153/225‑1 (MQ=255)
                                                                                          aTTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTGAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAAcc                                                                                                                                                                                                       <  1:157597/200‑1 (MQ=255)
                                                                                              aataatGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTaca                                                                                                                                                >  1:247579/1‑251 (MQ=255)
                                                                                                   tGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTgg                                                                                                                                                                                                                        <  1:82746/174‑1 (MQ=255)
                                                                                                    gATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAAcc                                                                                                                                                                                                       <  1:713326/190‑1 (MQ=255)
                                                                                                    gATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTg                                                                                                                                                                   <  1:816108/226‑1 (MQ=255)
                                                                                                    gATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTg                                                                                                                                                                   >  1:514074/1‑226 (MQ=255)
                                                                                                    gATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTacac                                                                                                                                               >  1:644418/1‑246 (MQ=255)
                                                                                                    gATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTa                                                                                                                                          >  1:606248/1‑251 (MQ=255)
                                                                                                       tAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGt                                                                                                                                       <  1:259842/251‑1 (MQ=255)
                                                                                                        aaaTCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTg                                                                                                                                                                   <  1:373682/222‑1 (MQ=255)
                                                                                                        aaaTCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTc                                                                                                                                      <  1:188097/251‑1 (MQ=255)
                                                                                                         aaTCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGAttt                                                                                                                                                                                                                                         <  1:406169/151‑1 (MQ=255)
                                                                                                         aaTCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAAt                                                                                                                                                                                 >  1:720417/1‑207 (MQ=255)
                                                                                                              gtgtTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTggag                                                                                                                                                                                                                      >  1:291801/1‑165 (MQ=255)
                                                                                                               tgttgtTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACTCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCtattat                                                                                                                                <  1:447972/250‑1 (MQ=255)
                                                                                                               tgttgtTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCtattat                                                                                                                                <  1:628373/250‑1 (MQ=255)
                                                                                                               tgttgtTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCtattat                                                                                                                                <  1:386660/250‑1 (MQ=255)
                                                                                                               tgttgtTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCtattat                                                                                                                                <  1:817334/250‑1 (MQ=255)
                                                                                                                   gttAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGtt                                                                                                                                                                                                                                     >  1:471755/1‑145 (MQ=255)
                                                                                                                   gttAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCtattat                                                                                                                                <  1:65215/246‑1 (MQ=255)
                                                                                                                   gttAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTag                                                                                                                           >  1:521494/1‑251 (MQ=255)
                                                                                                                   gttAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTag                                                                                                                           >  1:698019/1‑251 (MQ=255)
                                                                                                                          cccATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTatat                                                                                                                                                                                                  >  1:877019/1‑173 (MQ=255)
                                                                                                                           ccATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCtatta                                                                                                                                 <  1:225061/237‑1 (MQ=255)
                                                                                                                                    aTGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCAcc                                                                                                           <  1:365335/250‑1 (MQ=255)
                                                                                                                                                aTGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACattat                                                                                               <  1:431505/250‑1 (MQ=255)
                                                                                                                                                 tGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             <  1:809085/251‑1 (MQ=255)
                                                                                                                                                 tGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             <  1:285367/251‑1 (MQ=255)
                                                                                                                                                 tGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             <  1:139509/251‑1 (MQ=255)
                                                                                                                                                 tGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             <  1:794023/251‑1 (MQ=255)
                                                                                                                                                 tGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             <  1:674030/251‑1 (MQ=255)
                                                                                                                                                 tGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCAGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             <  1:316172/251‑1 (MQ=255)
                                                                                                                                                  gCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAgaga                                                                                                                        <  1:602193/223‑1 (MQ=255)
                                                                                                                                                  gCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             >  1:832704/1‑250 (MQ=255)
                                                                                                                                                    cGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATTgtgt                                                                                          <  1:523605/251‑1 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTggagga                                                                                                                                                                                                                    <  1:261988/126‑1 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAAcc                                                                                                                                                                                                       <  1:84866/139‑1 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAAcc                                                                                                                                                                                                       >  1:871436/1‑139 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTtc                                                                                                                                                                                               >  1:150143/1‑147 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTg                                                                                                                                                                   <  1:100481/175‑1 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTc                                                                                                                                      >  1:370333/1‑204 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCAcc                                                                                                           >  1:615070/1‑231 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             <  1:98150/245‑1 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             >  1:223396/1‑245 (MQ=255)
                                                                                                                                                       tGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATTGTGTTta                                                                                       >  1:272487/1‑251 (MQ=255)
                                                                                                                                                        gCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAAcc                                                                                                                                                                                                       <  1:175188/138‑1 (MQ=255)
                                                                                                                                                        gCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTGTTTGGATTTTCAGCCAACTTACACCACTAAGTCtattat                                                                                                                                >  1:446849/1‑209 (MQ=255)
                                                                                                                                                        gCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtgtg                                                                                           <  1:321041/246‑1 (MQ=255)
                                                                                                                                                                        tAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATTGTGTTTAATAAAAAACATAAGGaa                                                                      <  1:315929/251‑1 (MQ=255)
                                                                                                                                                                               aTTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGt                                                                                                                                       <  1:590107/179‑1 (MQ=255)
                                                                                                                                                                                             aCCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTagag                                                                                                                         >  1:139544/1‑179 (MQ=255)
                                                                                                                                                                                             aCCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATTGTGTTTAATAAAAAACATAAGGa                                                                       <  1:348225/229‑1 (MQ=255)
                                                                                                                                                                                                     cTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACattat                                                                                               <  1:152386/197‑1 (MQ=255)
                                                                                                                                                                                                           aTTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTc                                                                                                                                      >  1:512776/1‑152 (MQ=255)
                                                                                                                                                                                                                   gATCGTCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCAcc                                                                                                           <  1:170398/171‑1 (MQ=255)
                                                                                                                                                                                                                        tCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGAtc                                                                                                                                                                           <  1:75732/102‑1 (MQ=255)
                                                                                                                                                                                                                        tCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTagag                                                                                                                         >  1:326073/1‑152 (MQ=255)
                                                                                                                                                                                                                        tCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACattat                                                                                               <  1:114245/178‑1 (MQ=255)
                                                                                                                                                                                                                        tCACAGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATTGTGTTtaataa                                                                                   >  1:478780/1‑190 (MQ=255)
                                                                                                                                                                                                                           caGAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTa                                                                                                                <  1:634590/158‑1 (MQ=255)
                                                                                                                                                                                                                             gAAAGGAATCGGGACATTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACattat                                                                                               >  1:782631/1‑173 (MQ=255)
                                                                                                                                                                                                                                            aTTTTTGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATTGTGTTTAATAAAAAACATAAGGAAAATTATAATTTAGATACAATCAAAAATTATAATTTCGCTTGTCCACAAAATGACACAACACATATTTc  <  1:706535/251‑1 (MQ=255)
                                                                                                                                                                                                                                             tttttGCTTATTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATGTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATtg                                                                                             <  1:748129/159‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                
AATCAGAATGGTTAAAATAAATTAATTTTATGTCAATAACAAAAAAACTCGTTGCTAAATTAGCCGGAAAACGAAAAGCAGAAAACATAGATTTAATAATGATTAAATCGGTGTTGTTAAAACCCATTGGCGATGCTATTGGCGATGCCGTTGCCCATACCGCGCATTTAAAACAATTAAAACTTGCCAACCCGGAACTGGTGATTGGCGTGATCGTCACAGAAAGGAATCGGGACATTTTTGCTTGTTCCGATTTAGTTGATGTTCTCCTGGAGGACAAACCTTTAACCTATATTTCTCAATTTCGCAAATGGGATCTCTATTTGGATTTTCAGCCAACTTACACCACTAAGTCTATTATTTTAGAGAAGCTGTTATCACCGAAGTACATTATTGTGTTTAATAAAAAACATAAGGAAAATTATAATTTAGATACAATCAAAAATTATAATTTCGCTTGTCCACAAAATGACACAACACATATTTC  >  1/571516‑572002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑