| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 565,662 | T→C | intergenic (+68109/‑133681) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 565,662 | 0 | T | C | 100.0% | 234.7 / NA | 83 | intergenic (+68109/‑133681) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (27/56); total (27/56) | |||||||||||
ATCGGGTGCCGATAACGACCGCACTTTGCCCGTTGCGCGCCCGCTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTTCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCACCGACCAAATCGCCGCACTAAAAGGGTTGTTGCCTTTCTCCGGCAAATCATTCGCCGCCTGCAACG > 1/565416‑565907 | aTCGGGTGCCGATAACGACCGCACTTTGCCCGTTGCGCGCCCGCTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCcaac < 1:62039/251‑1 (MQ=255) cGGGTGCCGATAACGACCGCACTTTGCCCGTTGCGCGCCCGCTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCcaacaa < 1:420605/251‑1 (MQ=255) ggTGCCGATAACGACCGCACTTTGCCCGTTGCGCGCCCGCTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCcaac > 1:866476/1‑247 (MQ=255) ggTGCCGATAACGACCGCACTTTGCCCGTTGCGCGCCCGCTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCaacaac < 1:260476/250‑1 (MQ=255) ccGATAACGACCGCACTTTGCCCGTTGCGCGCCCGCTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACgg > 1:492348/1‑251 (MQ=255) aTAACGACCGCACTTTGCCCGTTGCGCGCCCGCTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAGCCCGTCACGCCGTCCAACAACCACGGGAc < 1:469326/251‑1 (MQ=255) ccGCACTTTGCCCGTTGCGCGCCCGCTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGATCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAAccc < 1:425907/251‑1 (MQ=255) cTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCaacaac < 1:807571/211‑1 (MQ=255) tGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAacac < 1:661963/251‑1 (MQ=255) acCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGc < 1:257229/251‑1 (MQ=255) ccTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCaacaac < 1:55129/203‑1 (MQ=255) aaaCGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGa < 1:186659/251‑1 (MQ=255) gCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAaca > 1:396907/1‑234 (MQ=255) tCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTCAGGt < 1:565406/251‑1 (MQ=255) tCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAgg < 1:749962/250‑1 (MQ=255) tCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGt < 1:379850/251‑1 (MQ=255) tCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGt < 1:480474/251‑1 (MQ=255) tCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGt < 1:290232/251‑1 (MQ=255) tCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGt < 1:127056/251‑1 (MQ=255) tCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGt < 1:713626/251‑1 (MQ=255) gTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCGCTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCcaacaa < 1:33222/183‑1 (MQ=255) gATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAac < 1:595427/209‑1 (MQ=255) gATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGa > 1:260352/1‑251 (MQ=255) gATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGa > 1:736977/1‑251 (MQ=255) aTTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAAc < 1:299473/248‑1 (MQ=255) aTTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAAc < 1:739217/248‑1 (MQ=255) aTTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGa < 1:541777/250‑1 (MQ=255) ggAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCTGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAacac < 1:431408/216‑1 (MQ=255) aaTGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCGCTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGcc < 1:772562/251‑1 (MQ=255) caCGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTc < 1:688278/250‑1 (MQ=255) caCGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTc < 1:778298/250‑1 (MQ=255) aCGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTcac < 1:49775/251‑1 (MQ=255) tCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGCAACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTc > 1:822923/1‑247 (MQ=255) tCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCcaacaa > 1:72361/1‑161 (MQ=255) tGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCgg > 1:670219/1‑250 (MQ=255) caTTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAAc < 1:156510/165‑1 (MQ=255) caTTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACg > 1:62656/1‑223 (MQ=255) caTTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCg > 1:668002/1‑251 (MQ=255) ttAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGcc < 1:901774/251‑1 (MQ=255) cgcgCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAAttg < 1:437855/251‑1 (MQ=255) ccTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAg > 1:890147/1‑229 (MQ=255) ccTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAAttgttg < 1:806191/250‑1 (MQ=255) cTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAac > 1:778989/1‑169 (MQ=255) gAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTtgctg > 1:412390/1‑250 (MQ=255) aCGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCaacaac < 1:845329/133‑1 (MQ=255) ccGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAAttgttg < 1:218563/235‑1 (MQ=255) ccGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGAtt > 1:524802/1‑251 (MQ=255) gCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGcc < 1:8426/164‑1 (MQ=255) cGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTcc < 1:653315/250‑1 (MQ=255) gATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGc > 1:273425/1‑246 (MQ=255) gATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACtt > 1:323469/1‑251 (MQ=255) cGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCTGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGa < 1:430331/251‑1 (MQ=255) aaCACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGa < 1:364082/244‑1 (MQ=255) cacCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTcaca < 1:692220/178‑1 (MQ=255) cacCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAAttg < 1:287722/198‑1 (MQ=255) cacCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGAtt > 1:847354/1‑217 (MQ=255) tgcttgcCATGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGc < 1:295853/128‑1 (MQ=255) ttgccttgcTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGcgc < 1:172076/251‑3 (MQ=255) tgcAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAAt > 1:760969/1‑251 (MQ=255) cAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATc < 1:179022/250‑1 (MQ=255) aaaaTCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATcgc < 1:683637/251‑1 (MQ=255) ctctTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCAc < 1:166552/251‑1 (MQ=255) ctTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTa > 1:637928/1‑251 (MQ=255) aTAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAg < 1:604068/250‑1 (MQ=255) tAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAggg < 1:514967/251‑1 (MQ=255) tAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAggg < 1:838103/251‑1 (MQ=255) tAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAggg < 1:177991/251‑1 (MQ=255) tAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAggg < 1:744204/251‑1 (MQ=255) tAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAggg < 1:256571/251‑1 (MQ=255) tAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAggg < 1:440786/251‑1 (MQ=255) ttGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTg < 1:61835/106‑1 (MQ=255) ttGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAGGgttgt > 1:355925/1‑251 (MQ=255) cAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAGGGTTGTTGc < 1:76718/251‑1 (MQ=255) aTAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTtgc < 1:198557/154‑1 (MQ=255) gATTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAg > 1:289529/1‑236 (MQ=255) aTTTCCGTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAGGGTTGTTGCCTTtctc < 1:59485/251‑1 (MQ=255) gTTTTGCCGGAACCCGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAGGGTTGTTGCCTTTCTCCGGCaa > 1:339656/1‑251 (MQ=255) ccGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGt > 1:789887/1‑85 (MQ=255) ccGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGa > 1:229494/1‑92 (MQ=255) ccGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAGGGTTGTTGCCTTTCTCCGGCAAATCATTcgccgc > 1:218001/1‑250 (MQ=255) ccGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAGGGTTGTTGCCTTTCTCCGGCAAATCATTcgccgc > 1:877915/1‑250 (MQ=255) ccGTCACGCCGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAGGGTTGTTGCCTTTCTCCGGCAAATCATTCgccgcc < 1:669309/251‑1 (MQ=255) ccGTCCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCGCCGACCAAATCGCCGCACTAAAAGGGTTGTTGCCTTTCTCCGGCAAATCATTCGCCGCCTGCAACg > 1:11319/1‑250 (MQ=255) | ATCGGGTGCCGATAACGACCGCACTTTGCCCGTTGCGCGCCCGCTGCCACACCTGCAAACGCTGCGTGTCGTTCAGATTGGAATGCAGCACGTCAATGACCACATTAAAACGCGCCTGAAAACGCCGCACCGTTTGTGGCGTTAAACTGATTTCCGGC‑ACCAACACCAGCACTTGCTTGCCTTGCTGCAAAATCTCTTCGATAAATTGCAAATAGATTTCCGTTTTGCCGGAACCCGTCACGCCGTTCAACAACCACGGGACAAAACCCTGAGTAAATTTCAACTGACTGAACACTAACGCCTGCGACTTGTTTAAGGTTAAACGATCCGCCTTATTCACAAGCGGCTTATCGCCTAATTGTTGCTGCCAGGTTTGGATTTCCGTTTCCAGAGCAACTTCCGTGACGTAATCTTTGGCTTTCAGCACCGACCAAATCGCCGCACTAAAAGGGTTGTTGCCTTTCTCCGGCAAATCATTCGCCGCCTGCAACG > 1/565416‑565907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |