| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 563,118 | A→G | intergenic (+65565/‑136225) | unknown → / → unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 563,118 | 0 | A | G | 100.0% | 241.2 / NA | 88 | intergenic (+65565/‑136225) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (54/34); total (54/34) | |||||||||||
ATATAAATCGTCCCCGGCGAGATTTTTGCTTCTCTGGCAATCTTGTGCATAGACAAGTTTGGCAGCCCCACCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCATTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCACCCTCGCCGGCAAGCCGAGTATCGCCAGA > 1/562872‑563355 | atataaatCGTCCCCGGCGAGATTTTTGCTTCTCTGGCAATCTTGTGCATAGACAAGTTTGGCAGCCCCACCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGttcgttca > 1:108200/1‑251 (MQ=255)atataaatCGTCCCCGGCGAGATTTTTGCTTCTCTGGCAATCTTGTGCATAGACAAGTTTGGCAGCCCCACCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGttcgttca > 1:296100/1‑251 (MQ=255) cAATCTTGTGCATAGACAAGTTTGGCAGCCCCACCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAAt < 1:581848/250‑1 (MQ=255) cTTGTGCATAGACAAGTTTGGCAGCCCCACCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATaaaaa > 1:483004/1‑251 (MQ=255) aGTTTGGCAGCCCCACCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTc < 1:97203/212‑1 (MQ=255) gCAGCCCCACCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTAc < 1:232729/250‑1 (MQ=255) cAGCCCCACCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTACATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCg > 1:208669/1‑251 (MQ=255) aCCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACttt > 1:268205/1‑250 (MQ=255) aTCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGAt > 1:832081/1‑251 (MQ=255) ggCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAAt > 1:826291/1‑195 (MQ=255) aaaTCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAAc < 1:630578/251‑1 (MQ=255) cTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCaa > 1:305069/1‑251 (MQ=255) aTCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCtcattc > 1:223488/1‑215 (MQ=255) aTCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTaa > 1:475216/1‑251 (MQ=255) aTCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTaa > 1:855954/1‑251 (MQ=255) gTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATcc > 1:857715/1‑224 (MQ=255) gattCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCttttt > 1:849297/1‑250 (MQ=255) gattCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCttttt > 1:788419/1‑250 (MQ=255) attCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTc > 1:537964/1‑250 (MQ=255) attCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTc > 1:810277/1‑250 (MQ=255) gTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATcc < 1:371734/206‑1 (MQ=255) aaTTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCa > 1:399731/1‑251 (MQ=255) aTTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCtcattc > 1:578578/1‑184 (MQ=255) ttAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACAt > 1:169022/1‑199 (MQ=255) ttAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCAc > 1:798777/1‑250 (MQ=255) aataaATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTAc > 1:184373/1‑166 (MQ=255) aataaATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATc < 1:673922/219‑1 (MQ=255) aaaTTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAAc < 1:22326/203‑1 (MQ=255) aaaTTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCgg > 1:269763/1‑250 (MQ=255) gAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCtcattc < 1:742819/173‑1 (MQ=255) gAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTa > 1:663424/1‑250 (MQ=255) gAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTa > 1:343390/1‑250 (MQ=255) aGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTcc > 1:383086/1‑228 (MQ=255) aGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTACTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATcc > 1:135566/1‑190 (MQ=255) gTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTAAATcc > 1:669000/1‑189 (MQ=255) ttAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGa < 1:212076/250‑1 (MQ=255) aTCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCAc < 1:209017/251‑1 (MQ=255) cGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAGAAAGTGCGGTGATTTTTTACCGCACTTTCtcat < 1:47074/163‑1 (MQ=255) cGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTAc > 1:818832/1‑150 (MQ=255) cGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCtcat > 1:659208/1‑163 (MQ=255) cGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCAc > 1:365820/1‑249 (MQ=255) cGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCAc > 1:344900/1‑249 (MQ=255) ttAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTg < 1:199563/107‑1 (MQ=255) ttAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCt > 1:609836/1‑167 (MQ=255) ttAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATc > 1:629395/1‑201 (MQ=255) gAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCtcat < 1:512061/158‑1 (MQ=255) caTTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGtaaaaaatc < 1:562422/112‑9 (MQ=255) caTTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTAc < 1:591324/114‑1 (MQ=255) caTTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCtcat < 1:682407/127‑1 (MQ=255) caTTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCGTCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACtt > 1:394865/1‑251 (MQ=255) caTTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGacc < 1:90822/223‑1 (MQ=255) caTTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCAcgc > 1:86224/1‑234 (MQ=255) caTTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACtt > 1:99/1‑251 (MQ=255) tttAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACTGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACttt > 1:735664/1‑250 (MQ=255) tttAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATGACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGa < 1:456794/207‑1 (MQ=255) gtaggtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCt < 1:697563/172‑1 (MQ=255) gtaggtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTttcattc < 1:311730/250‑1 (MQ=255) taggtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCAc < 1:759712/251‑1 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTg > 1:710673/1‑51 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATc > 1:668719/1‑156 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCAt < 1:91340/179‑1 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTc > 1:365961/1‑183 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGa < 1:596614/198‑1 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATc > 1:25443/1‑200 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTcc > 1:6383/1‑229 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCAccc < 1:647719/250‑1 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCAccc < 1:66362/250‑1 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCAcc > 1:773027/1‑249 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATAACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCAcc > 1:806363/1‑249 (MQ=255) gtTACAAACAGTCAATACATTGCGCTGAATGAACGTTCGCTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCAcc > 1:317125/1‑249 (MQ=255) cAAACAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCAcgc > 1:620023/1‑219 (MQ=255) cAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCCTCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCAccc > 1:423663/1‑242 (MQ=255) cAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCAcc < 1:519332/195‑1 (MQ=255) cAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATc > 1:396022/1‑225 (MQ=255) cAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTttca > 1:615636/1‑235 (MQ=255) cAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCACCCTCGCCg < 1:156713/248‑1 (MQ=255) cAGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCACCCTCGCCGGCa > 1:889955/1‑251 (MQ=255) aGTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCACCCTCGCCGGCaa > 1:78665/1‑251 (MQ=255) gTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAAc > 1:223403/1‑133 (MQ=255) gTCAATACATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGa > 1:455191/1‑188 (MQ=255) cATTGCGCTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCt < 1:676041/151‑1 (MQ=255) cgcTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCACCCTCGCCGGCAAGCCGAGTATCGcc < 1:564314/251‑1 (MQ=255) gcTGAATGAACGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGa < 1:662980/175‑1 (MQ=255) gaatgaaCGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCAc < 1:379755/132‑1 (MQ=255) gaatgaaCGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATc < 1:273337/207‑1 (MQ=255) gaatgaaCGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCAcc < 1:393424/223‑1 (MQ=255) gaatgaaCGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCAcc > 1:815263/1‑223 (MQ=255) gaatgaaCGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCACCCTCGCCGGCAAGCCGAGTATCGCCAGa > 1:449297/1‑250 (MQ=255) gaatgaaCGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCACCCTCGCCGGCAAGCCGAGTATCGCCAGa > 1:611996/1‑250 (MQ=255) gaaCGTTCGTTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATc < 1:258576/91‑1 (MQ=255) | ATATAAATCGTCCCCGGCGAGATTTTTGCTTCTCTGGCAATCTTGTGCATAGACAAGTTTGGCAGCCCCACCGTTGCCATTAATGCATCGGTGGCAGTAAAAATCCGCTCGATCATATCCGTTTCAGATTGATTCATAGTAAATTAATAAATTGAGTTAATCGTTAGAAGTGCGGTGAAAATTTTTTTCAAATCGCACATTTAGGTAGGTTACAAACAGTCAATACATTGCGCTGAATGAACGTTCATTCATTTTATTGATTTTTTCTTGTTTGGCAAGCTGAAAATAAAAAAAGTGCGGTGATTTTTTACCGCACTTTCTCATTCATCTTGACGATTACATCCCGATAACTACGCAACTAATCACGCTTTTGGCTTTTTCCTGCATCTTCACCGCGGCATTACGATCACCTGCCGGACCAACCACCACGCGGTTCCAATCGGCACTTTCATTCACCCTCGCCGGCAAGCCGAGTATCGCCAGA > 1/562872‑563355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |