Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	472,167	C→T	intergenic (‑55345/‑25296)	unknown ← / → unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	472,167	0	C	T	100.0%	154.8 / NA	58	intergenic (‑55345/‑25296)	unknown/unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (32/26);  total (32/26)

GTATTATTCAATAGCAACTATAATTACATTACTTACTTTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACCAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGATTTTGCAGCAACAGGCGAAAAA  >  1/471930‑472403                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                             gTATTATTCAATAGCAACTATAATTACATTACTTACTTTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCg                                                                                                                                                                                                                                 >  1:631863/1‑251 (MQ=255)      attCAATAGCAACTATAATTACATTACTTACTTTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTg                                                                                                                                                                                                                            >  1:9983/1‑251 (MQ=255)         cAATAGCAACTATAATTACATTACTTACTTTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGt                                                                                                                                                                                                                         >  1:168811/1‑251 (MQ=255)                       attacattacTTACTTTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACgg                                                                                                                                                                                                           <  1:374903/251‑1 (MQ=255)                        ttacattacTTACTTTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGgt                                                                                                                                                                                                          >  1:182618/1‑251 (MQ=255)                             ttacttacTTTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTgtgag                                                                                                                                                                                                     <  1:458537/251‑1 (MQ=255)                             ttacttacTTTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTgtgag                                                                                                                                                                                                     <  1:440339/251‑1 (MQ=255)                                 ttacttTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACTAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGtgagtgag                                                                                                                                                                                                 <  1:228457/251‑1 (MQ=255)                                    cttTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTgtgag                                                                                                                                                                                                     >  1:132106/1‑244 (MQ=255)                                    cttTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCg                                                                                                                                                                                               >  1:753872/1‑250 (MQ=255)                                              gTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGa                                                                                                                                                                                    >  1:18155/1‑251 (MQ=255)                                                 cTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGa                                                                                                                                                                                 >  1:609107/1‑251 (MQ=255)                                                  ttACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGTGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGAc                                                                                                                                                                                <  1:280351/251‑1 (MQ=255)                                                                   ttGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAg                                                                                                                                                               <  1:238154/251‑1 (MQ=255)                                                                                aaatttaTTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGtt                                                                                                                                                  <  1:577775/251‑1 (MQ=255)                                                                                  atttatttTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAg                                                                                                                                                <  1:16103/251‑1 (MQ=255)                                                                                                     aTTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAacac                                                                                                                             <  1:379210/251‑1 (MQ=255)                                                                                                       ttttAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAg                                                                                                                           <  1:133496/251‑1 (MQ=255)                                                                                                            aGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTgtgagtg                                                                                                                                                                                                   >  1:70662/1‑174 (MQ=255)                                                                                                                              atatTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACg                                                                                                                                                                                     >  1:394118/1‑170 (MQ=255)                                                                                                                              atatTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAac                                                                                                                               <  1:872196/224‑1 (MQ=255)                                                                                                                                        aCGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAAATGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAAt                                                                                          >  1:843052/1‑251 (MQ=255)                                                                                                                                           tGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTg                                                                                       >  1:361154/1‑251 (MQ=255)                                                                                                                                             gCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAacac                                                                                                                             <  1:217573/211‑1 (MQ=255)                                                                                                                                                  gTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGa                                                                                >  1:38193/1‑251 (MQ=255)                                                                                                                                                  gTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATCTGGTTCGGa                                                                                >  1:275644/1‑251 (MQ=255)                                                                                                                                                       ggCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTgtgag                                                                                                                                                                                                     >  1:745246/1‑129 (MQ=255)                                                                                                                                                        gCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGt                                                                           >  1:888962/1‑250 (MQ=255)                                                                                                                                                        gCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGt                                                                           >  1:595321/1‑250 (MQ=255)                                                                                                                                                             aGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAg                                                                                                                                                               <  1:121073/161‑1 (MQ=255)                                                                                                                                                             aGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAg                                                                                                                                                <  1:150234/176‑1 (MQ=255)                                                                                                                                                             aGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTa                                                                     >  1:607794/1‑251 (MQ=255)                                                                                                                                                                  gTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGtgagtgag                                                                                                                                                                                                 >  1:356196/1‑122 (MQ=255)                                                                                                                                                                         aCGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAAt                                                         <  1:539942/251‑1 (MQ=255)                                                                                                                                                                          cGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAAtt                                                        <  1:350307/251‑1 (MQ=255)                                                                                                                                                                                   ttACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGAc                                                                                                                                                                                <  1:455441/122‑1 (MQ=255)                                                                                                                                                                                        gCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAac                                                                                                                               <  1:626223/166‑1 (MQ=255)                                                                                                                                                                                        gCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAac                                                                                                                               >  1:638439/1‑166 (MQ=255)                                                                                                                                                                                        gCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTgg                                          >  1:31387/1‑251 (MQ=255)                                                                                                                                                                                           tttAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGaaa                                       >  1:626411/1‑251 (MQ=255)                                                                                                                                                                                               accaaccGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGaa                                   >  1:622772/1‑251 (MQ=255)                                                                                                                                                                                                    ccGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAacac                                                                                                                             <  1:177118/156‑1 (MQ=255)                                                                                                                                                                                                    ccGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTaa                              >  1:881777/1‑251 (MQ=255)                                                                                                                                                                                                      gTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAac                                                                                                                               <  1:10665/152‑1 (MQ=255)                                                                                                                                                                                                              gTTTTGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGAtttt                    >  1:502885/1‑251 (MQ=255)                                                                                                                                                                                                               ttttGGTGTTGGTGAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGATTTTg                   >  1:672279/1‑251 (MQ=255)                                                                                                                                                                                                                   ggtgttggtgAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAAt                                                         <  1:339432/209‑1 (MQ=255)                                                                                                                                                                                                                   ggtgttggtgAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGATTTTgcag                >  1:760775/1‑250 (MQ=255)                                                                                                                                                                                                                    gtgttggtgAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATCGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGATTTTgcagca              >  1:540794/1‑251 (MQ=255)                                                                                                                                                                                                                      gttggtgAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGATTTTGCAGCaa             >  1:63469/1‑250 (MQ=255)                                                                                                                                                                                                                        tggtgAGTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGATTTTGCAGCAACAg          >  1:184405/1‑251 (MQ=255)                                                                                                                                                                                                                              gTCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTg                                               <  1:752137/208‑1 (MQ=255)                                                                                                                                                                                                                               tCTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTgg                                              <  1:289214/208‑1 (MQ=255)                                                                                                                                                                                                                                cTGTATTCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGATTTTGCAGCAACAGGCGaaaaa  >  1:543607/1‑251 (MQ=255)                                                                                                                                                                                                                                     ttCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAg                                                                                                                                                               <  1:421490/89‑1 (MQ=255)                                                                                                                                                                                                                                     ttCCGGTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGATTTTgc                  <  1:812284/230‑1 (MQ=255)                                                                                                                                                                                                                                          gTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAg                                                                                                                                                                        <  1:75116/75‑1 (MQ=255)                                                                                                                                                                                                                                          gTACTAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATg                                                                >  1:368171/1‑179 (MQ=255)                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                             GTATTATTCAATAGCAACTATAATTACATTACTTACTTTTGAGAAGTACTTACATAAACGTAAGTTTTGGAATAAATTTAAATTTATTTTTAATAAATTGATTTTTAAGGAAATAAAAATGGAAAATATTTTTGAACGTGGCAATGTTTTGGCTTCAGATTGTCCTTCACGCCAAATTTTACAGCATTTAACCAACCGTTGGGGCGTTTTGGTGTTGGTGAGTCTGTATTCCGGTACCAAACGTTTTAGCGAATTGCGTCGCGCCATTGACGGTGTGAGTGAGCGAATGCTGACGAAGACCTTACAAGAATTGGAAGCGGACGGTATGTTAGTTCGCAAATCCTATAACACAGTGCCGCCGCAAGTGGATTACACGCTGACGGAATTTGGTTCGGAGGCGTCAAGTAAAATGTTTGAATTGGTGGATTGGCTGGAAACGAATTTAACCGGGATTTTGCAGCAACAGGCGAAAAA  >  1/471930‑472403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑