Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	468,483	A→G	intergenic (‑51661/‑28980)	unknown ← / → unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	468,483	0	A	G	100.0%	142.3 / NA	51	intergenic (‑51661/‑28980)	unknown/unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (13/38);  total (13/38)

TTACGATTTGCCGTCATCGGCTTGGGCAATTCCGACTATGATACCTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGATAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCATTTACAACATAAAAAAGATCTTATCCAAGGTTTTCGTCGATCTTAATTATAGTAATAATAAAC  >  1/468241‑468698                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                        ttACGATTTGCCGTCATCGGCTTGGGCAATTCCGACTATGATACCTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACtt                                                                                                                                                                                                                   <  1:147442/249‑1 (MQ=255)         tGCCGTCATCGGCTTGGGCAATTCCGACTATGATACCTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAAt                                                                                                                                                                                                         <  1:759835/251‑1 (MQ=255)                aTCGGCTTGGGCAATTCCGACTATGATACCTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGaaa                                                                                                                                                                                                  <  1:214107/251‑1 (MQ=255)                             aTTCCGACTATGATACCTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTtat                                                                                                                                                                                     >  1:372784/1‑251 (MQ=255)                                   aCTATGATACCTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAacac                                                                                                                                                                                <  1:495073/250‑1 (MQ=255)                                    cTATGATACCTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGa                                                                                                                                                                              >  1:70742/1‑251 (MQ=255)                                          tACCTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAAt                                                                                                                                                                        <  1:404345/251‑1 (MQ=255)                                            ccTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAAttt                                                                                                                                                                      <  1:301595/251‑1 (MQ=255)                                                           tGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAAc                                                                                                                                                       <  1:863237/251‑1 (MQ=255)                                                            ggATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAAt                                                                                                                                                                                                         <  1:144054/200‑1 (MQ=255)                                                                 cGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGa                                                                                                                                                 >  1:296087/1‑251 (MQ=255)                                                                      gAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTATTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTtat                                                                                                                                                                                     >  1:706677/1‑210 (MQ=255)                                                                            aCCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACaga                                                                                                                                      >  1:283925/1‑251 (MQ=255)                                                                              cTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGt                                                                                                                                    <  1:341610/251‑1 (MQ=255)                                                                                    ggCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATac                                                                                                                               >  1:201429/1‑250 (MQ=255)                                                                                     gCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATac                                                                                                                               <  1:482230/249‑1 (MQ=255)                                                                                      cAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATacac                                                                                                                             <  1:591623/250‑1 (MQ=255)                                                                                      cAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATacac                                                                                                                             <  1:593121/250‑1 (MQ=255)                                                                                                ggTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTga                                                                                                                  >  1:584824/1‑251 (MQ=255)                                                                                                 gTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATaa                                                                                                                                                                          <  1:833012/194‑1 (MQ=255)                                                                                                           tCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGt                                                                                                       <  1:545028/251‑1 (MQ=255)                                                                                                            cGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTa                                                                                                      <  1:678869/251‑1 (MQ=255)                                                                                                                   ttGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATacac                                                                                                                             <  1:324277/221‑1 (MQ=255)                                                                                                                     gCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTa                                                                                                      <  1:719634/242‑1 (MQ=255)                                                                                                                      cGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTaac                                                                                            <  1:879117/251‑1 (MQ=255)                                                                                                                       gTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACATGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTaaca                                                                                           >  1:182215/1‑251 (MQ=255)                                                                                                                           tGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACtt                                                                                       <  1:321081/251‑1 (MQ=255)                                                                                                                               gTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTtat                                                                                                                                                                                     <  1:95231/153‑1 (MQ=255)                                                                                                                               gTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACag                                                                                                                                       <  1:691844/199‑1 (MQ=255)                                                                                                                                 cTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTtata                                                                                                                                                                                    <  1:792444/152‑1 (MQ=255)                                                                                                                                    aaCGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGa                                                                              <  1:227800/251‑1 (MQ=255)                                                                                                                                    aaCGGAAACCGATCAGGAACAATGCGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACag                                                                                                                                       <  1:424444/194‑1 (MQ=255)                                                                                                                                     aCGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGt                                                                                     <  1:645125/243‑1 (MQ=255)                                                                                                                                               aTCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATac                                                                                                                               <  1:328305/191‑1 (MQ=255)                                                                                                                                                tCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTc                                                                  <  1:120847/251‑1 (MQ=255)                                                                                                                                                 cAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAAc                                                                                                                                                                                                                     >  1:766000/1‑103 (MQ=255)                                                                                                                                                   ggAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCAtt                                                               >  1:642827/1‑251 (MQ=255)                                                                                                                                                    gAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCAtt                                                               <  1:120683/250‑1 (MQ=255)                                                                                                                                                             gCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATacac                                                                                                                             <  1:240116/179‑1 (MQ=255)                                                                                                                                                                               aaCTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCATTTACAACATAAAAAAGATCTTATCCAAgg                                   <  1:719547/251‑1 (MQ=255)                                                                                                                                                                                             tCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAAt                                                                                                                                                                        <  1:103191/104‑1 (MQ=255)                                                                                                                                                                                             tCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCATTTACAACATAAAAAAGATCtt                                           >  1:621070/1‑229 (MQ=255)                                                                                                                                                                                              cTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTc                                                                                                                                                                                                                  <  1:564747/61‑1 (MQ=255)                                                                                                                                                                                              cTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGt                                                                                                                                    <  1:315912/139‑1 (MQ=255)                                                                                                                                                                                                 tAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCATTTACAACATAAAAAAGATCTTATCCAAGGTTTTCGTCGATCTTAAtt                 <  1:713715/251‑1 (MQ=255)                                                                                                                                                                                                   aTCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCATTTACAACATAAAAAAGATCTTATCCAAGGTTTTCGTCGATCTTAATtat               <  1:848927/251‑1 (MQ=255)                                                                                                                                                                                                                aaataaaatCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATc                                                                                                 <  1:273699/156‑1 (MQ=255)                                                                                                                                                                                                                aaataaaatCAGTCATTTTCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCATTTACAACATAAAAAAGATCTTATCCAAGGTTTTCGTCGATCTTAATTATAGTAATAATAAAc  <  1:245006/251‑1 (MQ=255)                                                                                                                                                                                                                                 ttCTAAAACCTCTTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCATTTacaa                                                          <  1:213919/178‑1 (MQ=255)                                                                                                                                                                                                                                            ctTGTGGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATac                                                                                                                               >  1:661073/1‑98 (MQ=255)                                                                                                                                                                                                                                               gtgGGTAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCATTTACAACATAAAAAAGATCTTATCCa                                      >  1:832033/1‑184 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                        TTACGATTTGCCGTCATCGGCTTGGGCAATTCCGACTATGATACCTTCTGTTTTGCGGTGGATACGGTAGAACAGACCTTGCAGGCAAAAAGTGCGGTCAAAATTATCGACGCTTTGCGTATTGATGTCTTAACGGAAACCGATCAGGAACAATGTGCGGAAGACTGGCTGCCTAACTTTCTGCACCATCTTTAATCCTTTTGTTCAAAATAAAATCAGTCATTTTCTAAAACCTCTTGTGGATAACTTCACATAAAATTGTGAAAAATCTGTTTTTATAACACGAATAAATTTTACAAAAGATCCAACTGTGGATAAATAACAGAGTTATACACAAGAAATTTGAGGAGGATCGGTAAGATCTTAACAACTTGTAGCATGATCCATCTCCTTCATTTACAACATAAAAAAGATCTTATCCAAGGTTTTCGTCGATCTTAATTATAGTAATAATAAAC  >  1/468241‑468698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑