Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 466,293 G→A intergenic (‑49471/‑31170) unknown ← / → unknown SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1466,2930GA100.0% 172.4 / NA 64intergenic (‑49471/‑31170)unknown/unknownSSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (27/37);  total (27/37)

GACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTGCAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGTGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGGGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGTAAAATAAATAAAAGCCGGTTTAATTGCCGGCTTTATTTTTATAATTAAGCATTAATTAAACGATAAAG  >  1/466059‑466531
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                              
gACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAc                                                                                                                                                                                                                                 >  1:376008/1‑250 (MQ=255)
gACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAc                                                                                                                                                                                                                                 >  1:50682/1‑250 (MQ=255)
 aCTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                                                                                                                                                <  1:571758/250‑1 (MQ=255)
 aCTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                                                                                                                                                <  1:332804/250‑1 (MQ=255)
  cTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGa                                                                                                                                                                                                                                       <  1:160384/242‑1 (MQ=255)
  cTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAc                                                                                                                                                                                                                                 >  1:312254/1‑248 (MQ=255)
        aTGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAAt                                                                                                                                                                                                                        >  1:331700/1‑251 (MQ=255)
         tGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATGCAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAAc                                                                                                                                                                                                                                           <  1:325699/231‑1 (MQ=255)
           cAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGa                                                                                                                                                                                                                      <  1:403026/250‑1 (MQ=255)
               atcaatcTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                                                                                                                                                >  1:303425/1‑236 (MQ=255)
                       ctATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAAttt                                                                                                                                                                                                          >  1:716951/1‑250 (MQ=255)
                                                     cTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCAGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGaaaa                                                                                                                                                                           >  1:432332/1‑251 (MQ=255)
                                                             cAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGAt                                                                                                                                                                                        <  1:218693/230‑1 (MQ=255)
                                                                               tCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 <  1:402493/251‑1 (MQ=255)
                                                                                  tacAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAAttt                                                                                                                                                                                                          <  1:742265/189‑1 (MQ=255)
                                                                                      gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                                                                                                                                                >  1:784719/1‑165 (MQ=255)
                                                                                      gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAgg                                                                                                                                                                               <  1:687114/214‑1 (MQ=255)
                                                                                      gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 >  1:209285/1‑244 (MQ=255)
                                                                                      gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 >  1:384128/1‑244 (MQ=255)
                                                                                      gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCtt                                                                                                                                          >  1:402814/1‑251 (MQ=255)
                                                                                       aaaTAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGa                                                                                                                                                                                                                      <  1:479133/174‑1 (MQ=255)
                                                                                       aaaTAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 <  1:301351/243‑1 (MQ=255)
                                                                                       aaaTAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 >  1:42171/1‑243 (MQ=255)
                                                                                       aaaTAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGAc                                                                                                                                             <  1:655970/247‑1 (MQ=255)
                                                                                            ataCGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAAttt                                                                                                                                                                                                          >  1:308753/1‑181 (MQ=255)
                                                                                                ggATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAAc                                                                                                                                                                                                                    <  1:859954/167‑1 (MQ=255)
                                                                                                   tAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCt                                                                                                                             <  1:767135/251‑1 (MQ=255)
                                                                                                     aaTTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 >  1:348302/1‑229 (MQ=255)
                                                                                                          gaagaTGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAAtt                                                                                                                                                                                    >  1:81961/1‑189 (MQ=255)
                                                                                                             gaTGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAggg                                                                                                                                                             >  1:28729/1‑209 (MQ=255)
                                                                                                                   tatCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGa                                                                                                                                                                                                                      <  1:268053/146‑1 (MQ=255)
                                                                                                                             aaaTACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCCGTTCAATGAACAGGCTAAttt                                                                                                                                                                                                          >  1:121701/1‑148 (MQ=255)
                                                                                                                               aTACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAAttt                                                                                                                                                                                                          >  1:381908/1‑146 (MQ=255)
                                                                                                                               aTACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACg                                                                                                                                                                                                      <  1:764172/150‑1 (MQ=255)
                                                                                                                               aTACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATg                                                                                                                                     <  1:669189/215‑1 (MQ=255)
                                                                                                                                      cGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                                                                                                                                                <  1:574839/117‑1 (MQ=255)
                                                                                                                                           agcgAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGAc                                                                                                                                             >  1:399070/4‑195 (MQ=255)
                                                                                                                                           agcgAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATg                                                                                                                                     >  1:300023/4‑203 (MQ=255)
                                                                                                                                           agcgAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATc                                                                                                                              <  1:81135/207‑1 (MQ=255)
                                                                                                                                           agcgAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACg                                                                                     >  1:843736/4‑251 (MQ=255)
                                                                                                                                           agcgAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACg                                                                                     >  1:655397/4‑251 (MQ=255)
                                                                                                                                              gAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                                                                                                                                                >  1:11407/1‑109 (MQ=255)
                                                                                                                                                   ccGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 >  1:699148/1‑183 (MQ=255)
                                                                                                                                                   ccGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGAcc                                                                                                                                            <  1:484230/188‑1 (MQ=255)
                                                                                                                                                   ccGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGa                                                                                                                        <  1:692643/208‑1 (MQ=255)
                                                                                                                                                      cTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTc                                                                           <  1:760434/250‑1 (MQ=255)
                                                                                                                                                           tCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGCGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGt                                                                      <  1:120974/250‑1 (MQ=255)
                                                                                                                                                            cATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 <  1:54254/174‑1 (MQ=255)
                                                                                                                                                            cATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCt                                                                                                                             >  1:152133/1‑194 (MQ=255)
                                                                                                                                                               cGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGTAaaat                                                                 <  1:203502/251‑1 (MQ=255)
                                                                                                                                                                 atatTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATg                                                                                                                  <  1:299163/200‑1 (MQ=255)
                                                                                                                                                                 atatTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGTAaaataa                                                               <  1:764241/251‑1 (MQ=255)
                                                                                                                                                                  tatTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGTAaaataaa                                                              <  1:82871/251‑1 (MQ=255)
                                                                                                                                                                      gATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 <  1:794043/164‑1 (MQ=255)
                                                                                                                                                                         aaaTTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGa                                                                                                                                                                                         <  1:283511/121‑1 (MQ=255)
                                                                                                                                                                                   aCGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 >  1:741469/1‑151 (MQ=255)
                                                                                                                                                                                   aCGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATgggg                                                                                                                                  <  1:873923/166‑1 (MQ=255)
                                                                                                                                                                                    cGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                                                                                                                                                 <  1:796265/150‑1 (MQ=255)
                                                                                                                                                                                    cGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGaaa                                                                                                                      <  1:183890/177‑1 (MQ=255)
                                                                                                                                                                                                tGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGTAAAATAAATAAAAGCCGGCTTAATTGCCGGCTTTAttt                                <  1:768743/251‑1 (MQ=255)
                                                                                                                                                                                                  aaaCTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGTAAAATAAATAAAAGCCGGTTTAATTGCCGGCTTTAtttt                               <  1:422889/250‑1 (MQ=255)
                                                                                                                                                                                                                    cGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAAttt                                                                                                                                                                                                          >  1:621994/1‑61 (MQ=255)
                                                                                                                                                                                                                    cGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGTAAAATAAATAAAAGCCGGTTTAATTGCCGGCTTTATTTTTATAATTAAGCattaatt             <  1:503873/250‑1 (MQ=255)
                                                                                                                                                                                                                               gAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGTAAAATAAATAAAAGCCGGTTTAATTGCCGGCTTTATTTTTATAATTAAGCATTAATTAAACGATAAAg  <  1:380474/250‑1 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                              
GACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTGCAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGTGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGGGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCTATGGAAATATGAGTTATTCGCCGAAATTATTTAAAAAACGATATTCACTCAAAGTAAAATAAATAAAAGCCGGTTTAATTGCCGGCTTTATTTTTATAATTAAGCATTAATTAAACGATAAAG  >  1/466059‑466531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑