Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	466,200	T→C	intergenic (‑49378/‑31263)	unknown ← / → unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	466,200	0	T	C	100.0%	133.4 / NA	47	intergenic (‑49378/‑31263)	unknown/unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (24/23);  total (24/23)

TTCAAAATCCGTTGGATTTTATAACCGCACTTTAGGCGTATTAAGGTGCGGTTAGTTTTTTTGTTATTTTTAAACTTAAAAACCAATTTTAACCGGATGACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTGCAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGTGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGGGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCT  >  1/465961‑466408                                                                                                                                                                                                                                                |                                                                                                                                                                                                                 ttCAAAATCCGTTGGATTTTATAACCGCACTTTAGGCGTATTAAGGTGCGGTTAGTTTTTTTGTTATTTTTAAACTTAAAAACCAATTTTAACCGGATGACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTa                                                                                                                                                                                                       >  1:276360/1‑251 (MQ=255)                        aCCGCACTTTAGGCGTATTAAGGTGCGGTTAGTTTTTTTGTTATTTTTAAACTTAAAAACCAATTTTAACCGGATGACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATa                                                                                                                                                                                      <  1:249502/245‑1 (MQ=255)                                      gTATTAAGGTGCGGTTAGTTTTTTTGTTATTTTTAAACTTAAAAACCAATTTTAACCGGATGACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGcc                                                                                                                                                                              <  1:177003/239‑1 (MQ=255)                                        aTTAAGGTGCGGTTAGTTTTTTTGTTATTTTTAAACTTAAAAACCAATTTTAACCGGATGACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTAt                                                                                                                                                                >  1:824801/1‑251 (MQ=255)                                           aaGGTGCGGTTAGTTTTTTTGTTATTTTTAAACTTAAAAACCAATTTTAACCGGATGACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGa                                                                                                                                                             <  1:24530/251‑1 (MQ=255)                                                                                      aTTTTAACCGGATGACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGc                                                                                                                                                                   >  1:94276/1‑202 (MQ=255)                                                                                                gATGACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCg                                                                                                                                                                                               >  1:114821/1‑164 (MQ=255)                                                                                                   gACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGAt                                                                                                                                                                                       <  1:424398/169‑1 (MQ=255)                                                                                                   gACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAc                                                                                                      >  1:50682/1‑250 (MQ=255)                                                                                                   gACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAc                                                                                                      >  1:376008/1‑250 (MQ=255)                                                                                                    aCTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                     <  1:571758/250‑1 (MQ=255)                                                                                                    aCTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                     <  1:332804/250‑1 (MQ=255)                                                                                                     cTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGa                                                                                                            <  1:160384/242‑1 (MQ=255)                                                                                                     cTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAc                                                                                                      >  1:312254/1‑248 (MQ=255)                                                                                                           aTGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAAt                                                                                             >  1:331700/1‑251 (MQ=255)                                                                                                            tGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATGCAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAAc                                                                                                                <  1:325699/231‑1 (MQ=255)                                                                                                              cAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGa                                                                                           <  1:403026/250‑1 (MQ=255)                                                                                                                  atcaatcTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                     >  1:303425/1‑236 (MQ=255)                                                                                                                          ctATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAAttt                                                                               >  1:716951/1‑250 (MQ=255)                                                                                                                                                        cTTTTTATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCAGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGaaaa                                                >  1:432332/1‑251 (MQ=255)                                                                                                                                                          ttttATCAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGc                                                                                                                                                                                                         >  1:407419/1‑96 (MQ=255)                                                                                                                                                                cAGTTTATTTTTTGTTTTTCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGAt                                                             <  1:218693/230‑1 (MQ=255)                                                                                                                                                                                  tCCTACAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                      <  1:402493/251‑1 (MQ=255)                                                                                                                                                                                     tacAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAAttt                                                                               <  1:742265/189‑1 (MQ=255)                                                                                                                                                                                         gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATg                                                                                                                                                                                                     >  1:262136/1‑69 (MQ=255)                                                                                                                                                                                         gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                     >  1:784719/1‑165 (MQ=255)                                                                                                                                                                                         gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAgg                                                    <  1:687114/214‑1 (MQ=255)                                                                                                                                                                                         gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                      >  1:209285/1‑244 (MQ=255)                                                                                                                                                                                         gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                      >  1:384128/1‑244 (MQ=255)                                                                                                                                                                                         gAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCtt               >  1:402814/1‑251 (MQ=255)                                                                                                                                                                                          aaaTAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGa                                                                                           <  1:479133/174‑1 (MQ=255)                                                                                                                                                                                          aaaTAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                      >  1:42171/1‑243 (MQ=255)                                                                                                                                                                                          aaaTAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                      <  1:301351/243‑1 (MQ=255)                                                                                                                                                                                          aaaTAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGAc                  <  1:655970/247‑1 (MQ=255)                                                                                                                                                                                               ataCGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAAttt                                                                               >  1:308753/1‑181 (MQ=255)                                                                                                                                                                                                   ggATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAAc                                                                                         <  1:859954/167‑1 (MQ=255)                                                                                                                                                                                                      tAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCt  <  1:767135/251‑1 (MQ=255)                                                                                                                                                                                                        aaTTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTtatat                      >  1:348302/1‑229 (MQ=255)                                                                                                                                                                                                             gaagaTGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAAtt                                                         >  1:81961/1‑189 (MQ=255)                                                                                                                                                                                                                gaTGAATATCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAggg                                  >  1:28729/1‑209 (MQ=255)                                                                                                                                                                                                                      tatCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGa                                                                                           <  1:268053/146‑1 (MQ=255)                                                                                                                                                                                                                       atCTTGGCGAAATACAAACGAATAGCGAATACCGCTATGt                                                                                                                                                                                                    <  1:458126/40‑1 (MQ=255)                                                                                                                                                                                                                                aaaTACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCCGTTCAATGAACAGGCTAAttt                                                                               >  1:121701/1‑148 (MQ=255)                                                                                                                                                                                                                                  aTACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAAttt                                                                               >  1:381908/1‑146 (MQ=255)                                                                                                                                                                                                                                  aTACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACg                                                                           <  1:764172/150‑1 (MQ=255)                                                                                                                                                                                                                                  aTACAAACGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATg          <  1:669189/215‑1 (MQ=255)                                                                                                                                                                                                                                         cGAATAGCGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGAGTAACAGGAATATAcc                                                                                                     <  1:574839/117‑1 (MQ=255)                                                                                                                                                                                                                                                |                                                                                                                                                                                                                 TTCAAAATCCGTTGGATTTTATAACCGCACTTTAGGCGTATTAAGGTGCGGTTAGTTTTTTTGTTATTTTTAAACTTAAAAACCAATTTTAACCGGATGACTTATAATGCAAAATCAATCTCTATTTTCAAATAGAAAATTTCTATTTGCCCTTTTTATCAGTTTATTTTTTGTTTTTCCTGCAGAAATAATACGGATAAATTAGAAGATGAATATCTTGGCGAAATACAAACGAATAGTGAATACCGCTATGTCATCGATATTGATAAATTAGCCAACGGAAAGGCTATTGAAACTTCGGTAAAAATAGCGATTTCACCGGAAAATTCAGGGGTAACAGGAATATACCTGTTCAATGAACAGGCTAATTTAACGCAAAACCTTGTGATAATTGAAGGAAAACCGCAACTTCAGGGTGACATTTATATAGACCTTCAATGGGGAATCT  >  1/465961‑466408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑